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2024-05-19 15:20:06
Summary for Dictyostelium discoideum AX4, AX4.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Dictyostelium discoideum AX4, AX4
Genomic elements6 chromosomes(s)
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DDB0232428
length: 4923596 bp
gc-content (intragenic): 0.290753 %

 
CDS:
1942 genes, length ø 1597 bp, gc-content ø 0.29
 
'+'-strand:
968 genes, length ø 1636 bp, gc-content ø 0.29
 
'-'-strand:
974 genes, length ø 1558 bp, gc-content ø 0.291
 

 
DDB0232429
length: 8484197 bp
gc-content (intragenic): 0.283405 %

 
CDS:
3318 genes, length ø 1595 bp, gc-content ø 0.283
 
'+'-strand:
1643 genes, length ø 1656 bp, gc-content ø 0.282
 
'-'-strand:
1675 genes, length ø 1535 bp, gc-content ø 0.284
 

 
DDB0232430
length: 6357299 bp
gc-content (intragenic): 0.289103 %

 
CDS:
2499 genes, length ø 1566 bp, gc-content ø 0.289
 
'+'-strand:
1244 genes, length ø 1617 bp, gc-content ø 0.288
 
'-'-strand:
1255 genes, length ø 1516 bp, gc-content ø 0.289
 

 
DDB0232431
length: 5450249 bp
gc-content (intragenic): 0.283746 %

 
CDS:
2111 genes, length ø 1595 bp, gc-content ø 0.283
 
'+'-strand:
1041 genes, length ø 1625 bp, gc-content ø 0.284
 
'-'-strand:
1070 genes, length ø 1566 bp, gc-content ø 0.282
 

 
DDB0232432
length: 5125352 bp
gc-content (intragenic): 0.279057 %

 
CDS:
1946 genes, length ø 1696 bp, gc-content ø 0.279
 
'+'-strand:
921 genes, length ø 1765 bp, gc-content ø 0.278
 
'-'-strand:
1025 genes, length ø 1633 bp, gc-content ø 0.279
 

 
DDB0232433
length: 3602379 bp
gc-content (intragenic): 0.296065 %

 
CDS:
1442 genes, length ø 1585 bp, gc-content ø 0.296
 
'+'-strand:
747 genes, length ø 1571 bp, gc-content ø 0.295
 
'-'-strand:
695 genes, length ø 1601 bp, gc-content ø 0.296
 

 
Genome featuresCDS:
13258 genes, length ø 1604 bp, gc-content ø 0.286
 
'+'-strand:
6564 genes, length ø 1646 bp, gc-content ø 0.286
 
'-'-strand:
6694 genes, length ø 1562 bp, gc-content ø 0.286
 
COG categories 
Amino acid transport and metabolism [E]249
Carbohydrate transport and metabolism [G]217
Cell cycle control, mitosis and meiosis [D]243
Cell motility [N]29
Cell wall/membrane biogenesis [M]197
Chromatin structure and dynamics [B]48
Coenzyme transport and metabolism [H]119
Cytoskeleton [Z]134
Defense mechanisms [V]73
Energy production and conversion [C]191
Extracellular structures [W]0
Function unknown [S]226
General function prediction only [R]1370
Inorganic ion transport and metabolism [P]155
Intracellular trafficking and secretion [U]116
Lipid transport and metabolism [I]251
NOT ANALYZED0
Nuclear structure [Y]3
Nucleotide transport and metabolism [F]102
Posttranslational modification, protein turnover, chaperones [O]440
RNA processing and modification [A]36
Replication, recombination and repair [L]564
Secondary metabolites biosynthesis, transport and catabolism [Q]252
Signal transduction mechanisms [T]428
Transcription [K]473
Translation, ribosomal structure and biogenesis [J]395
Unclassified [-]8385