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2024-05-19 18:18:12

Gene list

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COG category: Cytoskeleton
Organism: Polysphondylium pallidum, PN500

Number of genes found: 121

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
ChLim PPL_01620 contains a N-terminal Calponin Homology (CH) domain 3 LIM domains and 4 LIM-related domains (LRDs)DPPA0090b03.f1-3_x_part3 CDS264784 1950 + 0.398974
g10081 PPL_10611 EXOLTKG01B86TH-3_part2 CDS559669 3048 + 0.354987
g10201 PPL_10742 EXOLTKG01B86TH-3y_part1 CDS11616 2871 + 0.415535
g10246 PPL_10791 EXOLTKG01B86TH-3y_part1 CDS160183 1110 - 0.452252
g10476 PPL_11051 similar to the conserved MYO7A unconventional myosin required in Dictyostelium for phagocytosis and substrate adhesionEXOLTKG02GJRTE-5 CDS244004 7188 + 0.441013
g10508 PPL_13625 EXOLTKG02GJRTE-5 CDS333441 648 - 0.432099
g10509 PPL_11089 EXOLTKG02GJRTE-5 CDS334272 246 - 0.402439
g10510 PPL_11090 EXOLTKG02GJRTE-5 CDS335004 1131 - 0.465075
g10528 PPL_11109 EXOLTKG02GJRTE-5 CDS374548 1122 - 0.424242
g1073 PPL_01246 DPPA0061d07.r1-5 CDS1077160 450 + 0.431111
g10741 PPL_11332 PN500-F-W-a08d11.p658-5_part2 CDS494680 1350 + 0.48
g1105 PPL_01284 DPPA0061d07.r1-5 CDS1173570 1095 + 0.4
g11120 PPL_11875 PN500-G-d-72b01.r1-5 CDS393727 423 - 0.404255
g11220 PPL_11975 conditional processive motor protein that can move over long distances along F-actin without disassociating processiveness depends on high physiological Mgsup2sup concentrationsPN500-G-d-72b01.r1-5 CDS645165 6579 - 0.439124
g1216 PPL_01422 DPPA0090b03.f1-3_x_part2 CDS82405 1761 - 0.386144
g1284 PPL_01494 DPPA0090b03.f1-3_x_part2 CDS299699 3210 + 0.431464
g1323 PPL_01535 belongs to the MCAKKif2 subfamily contains 1 SAM domain predicted to play a role in mitosis DPPA0090b03.f1-3_x_part3 CDS31601 2793 - 0.397422
g1406 PPL_01622 class 1 myosin lacking the traditional tail domains common to short-tailed myosins binds actin and is in complex with several other proteins involved in phagocytosis maintenance of cortical tension and motilityDPPA0090b03.f1-3_x_part3 CDS269355 2628 - 0.467276
g1484 PPL_01713 120 kDa F-actin binding protein also often called filamin involved in actin cytoskeleton organization motility and development enriched in prestalk cellsDPPA0090b03.f1-3_x_part3 CDS484068 2571 + 0.495916
g1514 PPL_01742 DPPA0090b03.f1-3_x_part3 CDS570594 6348 + 0.502363
g1692 PPL_01930 DPPA0090b03.f1-3_x_part3 CDS1033091 1083 - 0.399815
g1713 PPL_01950 DPPA0090b03.f1-3_x_part3 CDS1091267 3774 + 0.409115
g1741 PPL_01978 belongs to the NCDKar3 subfamily predicted to play a role in mitosis DPPA0090b03.f1-3_x_part3 CDS1192106 2166 + 0.337488
g1772 PPL_02013 DPPA0090b03.f1-3_x_part3 CDS1278286 5934 - 0.441355
g2016 PPL_02276 DPPA0090b03.f1-3_x_part3 CDS2022610 1083 + 0.462604
g2033 PPL_02293 DPPA0090b03.f1-3_x_part3 CDS2065364 546 - 0.391941
g2043 PPL_02307 DPPA0090b03.f1-3_x_part3 CDS2093418 1128 - 0.406028
g2047 PPL_02312 DPPA0090b03.f1-3_x_part3 CDS2111070 1251 + 0.372502
g2077 PPL_02345 DPPA0090b03.f1-3_x_part3 CDS2202016 2310 + 0.437229
g2256 PPL_02557 DPPA0090b03.f1-3_x_part4 CDS272640 7911 + 0.407155
g2324 PPL_02635 DPPA0090b03.f1-3_y_part1 CDS166814 1131 - 0.493369
g2329 PPL_02640 component of the Dictyostelium Arp2Arp3 complex contributes to DdPPK2 activity also described as member of the polyphosphate kinase PPK3 familyDPPA0090b03.f1-3_y_part1 CDS177415 1179 - 0.478372
g2354 PPL_02661 DPPA0090b03.f1-3_y_part1 CDS236106 1083 + 0.500462
g245 PPL_00356 DPPA0004F08.r1-5_part2 CDS706438 2574 - 0.383061
g2465 PPL_02778 DPPA0090b03.f1-3_y_part1 CDS522785 3075 - 0.395447
g2500 PPL_02817 DPPA0090b03.f1-3_y_part1 CDS626203 2391 - 0.363028
g2520 PPL_12956 DPPA0090b03.f1-3_y_part1 CDS685506 600 - 0.503333
g292 PPL_00406 DPPA0004F08.r1-5_part2 CDS844954 1350 + 0.497778
g2989 PPL_03353 DPPA0090b03.f1-3_y_part1 CDS1956514 1278 + 0.406886
g3480 PPL_13071 DPPB0337b12.r1-5 CDS722126 2856 + 0.47619
g3556 PPL_04021 DPPB0337b12.r1-5 CDS936812 561 - 0.344029
g3605 PPL_04074 DPPB0337b12.r1-5 CDS1081884 2562 + 0.436768
g3610 PPL_04079 DPPB0337b12.r1-5 CDS1090054 1938 - 0.392157
g3775 PPL_13100 contains three EF hands similar to mammalian neuron specific calcium-binding protein hippocalcin belongs to the frequenins a family of myristoyl-switch calcium-binding proteinsDPPB0360e11.f1-5 CDS205070 687 + 0.379913
g3795 PPL_04288 DPPB0360e11.f1-5 CDS278486 420 - 0.366667
g3797 PPL_04290 DPPB0360e11.f1-5 CDS282733 5349 + 0.412787
g3841 PPL_04342 DPPB0360e11.f1-5 CDS444192 1821 - 0.468424
g3878 PPL_04382 DPPB0360e11.f1-5 CDS552502 4251 - 0.453776
g390 PPL_00504 DPPA0004F08.r1-5_part2 CDS1139544 1005 + 0.422886
g402 PPL_00520 DPPA0004F08.r1-5_part2 CDS1169690 1305 - 0.396935
g4114 PPL_04640 E0KFERV02EE9X2-3_part1 CDS205350 4110 - 0.390754
g4232 PPL_04782 E0KFERV02EE9X2-3_part1 CDS587284 3816 - 0.338312
g4313 PPL_13157 E0KFERV02EE9X2-3_part1 CDS807438 444 - 0.439189
g4319 PPL_04879 E0KFERV02EE9X2-3_part1 CDS823012 2682 - 0.439597
g4415 PPL_05006 centrosome-associated actin homolog contributes to the dynactin complex contributes to DdPPK2 activity also described as member of the polyphosphate kinase PPK3 familyE0KFERV02EE9X2-3_part2 CDS186112 1161 - 0.439276
g4516 PPL_05120 E3JQK7F01CUWUC-3_part1 CDS166945 1131 - 0.501326
g4804 PPL_05444 E3JQK7F01EFZL8-5 CDS498489 1131 - 0.498674
g4806 PPL_05446 class I (unconventiona) myosin component of actin-based molecular motorE3JQK7F01EFZL8-5 CDS509815 3210 - 0.467601
g4939 PPL_05585 E3JQK7F01EFZL8-5 CDS859398 1875 - 0.394133
g4948 PPL_05593 E3JQK7F01EFZL8-5 CDS885782 2646 + 0.383976
g5015 PPL_05657 E3JQK7F01EFZL8-5 CDS1069283 552 - 0.373188
g5037 PPL_05679 E3JQK7F01EFZL8-5 CDS1116247 3600 + 0.390556
g5068 PPL_05717 E3JQK7F01EFZL8-5 CDS1208172 5256 - 0.412861
g5261 PPL_05914 component of actin-based molecular motor myosin II (conventional myosin) componentE3JQK7F02G10GF-5 CDS300476 450 - 0.426667
g5271 PPL_05924 E3JQK7F02G10GF-5 CDS329759 3750 - 0.3728
g5302 PPL_05952 E3JQK7F02G10GF-5 CDS411317 2070 + 0.391304
g5340 PPL_05993 E3JQK7F02G10GF-5 CDS521329 4653 - 0.419299
g5360 PPL_06016 E3JQK7F02G10GF-5 CDS580090 1167 + 0.401028
g5380 PPL_06037 E3JQK7F02G10GF-5 CDS628755 1476 - 0.370596
g5524 PPL_06192 regulatory subunit of the Casup2supcalmodulin-dependent serinethreonine protein phosphatase contains an EF-hand calcium binding motifE3JQK7F02GERJ7-5 CDS198723 543 - 0.32965
g5532 PPL_06198 E3JQK7F02GERJ7-5 CDS225943 3663 + 0.420693
g5705 PPL_06386 E3JQK7F02HEVRT-5 CDS494355 1131 + 0.494253
g583 PPL_00717 DPPA0004F08.r1-5_part3 CDS133619 1368 + 0.410088
g5873 PPL_06567 E3JQK7F02HW0LE-5_part1 CDS9893 1248 + 0.453526
g6070 PPL_06793 E3JQK7F02HW0LE-5_part2 CDS503158 1392 - 0.336925
g6108 PPL_06832 E3JQK7F02HW0LE-5_part2 CDS604374 5403 - 0.391819
g6136 PPL_06860 kinesin-1 family protein belongs to the kinesin KHC subfamily binds microtubules in an ATP-dependent manner and bundles actin in vitroE3JQK7F02HW0LE-5_part2 CDS677205 2931 - 0.414193
g6211 PPL_06943 E3JQK7F02HW0LE-5_part2 CDS874822 1146 - 0.465096
g6238 PPL_06970 similar to RasGAP proteins contains one calponin homology domain and one rasGAP domainE3JQK7F02HW0LE-5_part2 CDS947044 4455 - 0.404714
g6272 PPL_13319 E3JQK7F02HW0LE-5_part2 CDS1060068 1482 - 0.348853
g6286 PPL_07021 E3JQK7F02HW0LE-5_part2 CDS1111894 3336 - 0.430156
g6677 PPL_07477 EVG8W8Q01C9YYY-5_part2 CDS63590 1314 + 0.420852
g6696 PPL_07496 conditional processive motor protein that can move over long distances along F-actin without disassociating processiveness depends on high physiological Mgsup2sup concentrationsEVG8W8Q01C9YYY-5_part2 CDS114098 4752 - 0.422559
g6733 PPL_07535 EVG8W8Q01EEF2G-5 CDS18337 2676 - 0.398729
g6772 PPL_07579 EVG8W8Q01EEF2G-5 CDS138267 1383 - 0.349964
g6782 PPL_07592 EVG8W8Q01EEF2G-5 CDS164490 1854 + 0.433657
g6783 PPL_07593 EVG8W8Q01EEF2G-5 CDS167917 1077 + 0.427112
g679 PPL_00817 DPPA0004F08.r1-5_part3 CDS396541 2343 + 0.374733
g6824 PPL_07637 class I (unconventiona) myosin component of actin-based molecular motorEVG8W8Q01EEF2G-5 CDS286393 3015 - 0.45141
g6930 PPL_07748 EVG8W8Q02J3HU6-3_part1 CDS235885 2979 + 0.426653
g6936 PPL_07754 EVG8W8Q02J3HU6-3_part1 CDS260219 1572 + 0.354326
g6941 PPL_07758 EVG8W8Q02J3HU6-3_part1 CDS278312 1371 - 0.477753
g7102 PPL_13381 EVG8W8Q02J3HU6-3_part2 CDS67303 1353 - 0.419069
g7712 PPL_08620 EVKQ3GG01CS5PZ-3_part1 CDS182289 2061 + 0.377972
g7881 PPL_08806 EVKQ3GG01CS5PZ-3_part1 CDS680168 1806 + 0.374308
g790 PPL_00951 DPPA0061d07.r1-5 CDS289283 3198 - 0.406504
g7913 PPL_08844 EVKQ3GG01CS5PZ-3_part1 CDS775011 1305 + 0.403831
g7950 PPL_08885 EVKQ3GG01CS5PZ-3_part1 CDS923738 3300 - 0.444545
g8060 PPL_09000 EVKQ3GG01CS5PZ-3_part1 CDS1217564 3576 - 0.459172
g8658 PPL_12292 EVKQ3GG01DOIJB_part1 CDS676296 1131 + 0.493369
g8892 PPL_12538 EVKQ3GG01DOIJB_part2 CDS509252 204 - 0.352941
g8926 PPL_12579 EVKQ3GG01DOIJB_part2 CDS609335 1131 + 0.488948
g8960 PPL_12620 EVKQ3GG01DOIJB_part2 CDS731427 4761 + 0.365469
g9052 PPL_09479 EVKQ3GG02I325Y-5_part1 CDS186628 2778 + 0.429446
g9097 PPL_09529 EVKQ3GG02I325Y-5_part1 CDS327535 5337 - 0.462807
g9142 PPL_09573 EVKQ3GG02I325Y-5_part1 CDS463558 444 - 0.371622
g9202 PPL_09632 EVKQ3GG02I325Y-5_part1 CDS623880 3273 + 0.458601
g9211 PPL_09640 EVKQ3GG02I325Y-5_part1 CDS647206 6339 - 0.395015
g9226 PPL_09653 EVKQ3GG02I325Y-5_part1 CDS690219 4179 + 0.441015
g9285 PPL_09726 EVKQ3GG02I325Y-5_part1 CDS842882 228 - 0.394737
g9286 PPL_09727 EVKQ3GG02I325Y-5_part1 CDS843130 753 - 0.39575
g9361 PPL_09803 EVKQ3GG02I325Y-5_part1 CDS1089579 13872 + 0.481546
g9383 PPL_09832 component of actin-based molecular motor myosin II (conventional myosin) componentEVKQ3GG02I325Y-5_part1 CDS1162519 282 + 0.397163
g9403 PPL_09857 EVKQ3GG02I325Y-5_part1 CDS1210354 909 - 0.326733
g943 PPL_01110 DPPA0061d07.r1-5 CDS717910 1554 + 0.425354
g9440 PPL_09899 EVKQ3GG02I325Y-5_part1 CDS1341566 3003 + 0.42291
g946 PPL_01113 DPPA0061d07.r1-5 CDS723402 447 - 0.344519
g9660 PPL_10144 EWNM59D01C4IL7-5_part1 CDS446197 3333 - 0.418542
g9664 PPL_10148 EWNM59D01C4IL7-5_part1 CDS459847 1323 + 0.446712
g9793 PPL_10300 EWNM59D01C4IL7-5_part1 CDS868368 1362 - 0.439794
g9905 PPL_10429 EXOLTKG01B86TH-3_part2 CDS29173 1464 - 0.41735