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2024-04-27 22:33:44

Gene list

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COG category: Nuclear structure

Number of genes found: 17

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
npl4 DDB_G0290227 ortholog of NPL4 together with ufd1 and cdcD involved in recognition of polyubiquitinated proteins and their presentation to the 26S proteasome for degradation DDB0232432 CDS3827990 1731 - 0.312536
xpo1 DDB_G0291306 DDB0232433 CDS102439 3174 - 0.3431
xpo5 DDB_G0284379 DDB0232431 CDS1912156 3408 - 0.289319
 
Dictyostelium fasciculatum, SH3
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
g1158 DFA_01155 Dfasci-F-a-25c12.r2-5 CDS2078253 1710 - 0.335673
g1576 DFA_01581 Dfasci-F-a-25c12.r2-5 CDS3099904 3147 + 0.370512
g6085 DFA_06324 Dfasci-G-p-12c09.r1-3 CDS1036520 3003 - 0.325008
g7177 DFA_07448 ET2XIPL01CNAVH-3 CDS1541344 3096 - 0.312984
g7537 DFA_07798 ET2XIPL01COFD4-5 CDS563666 3165 - 0.384834
g9126 DFA_09459 EU5ZYIE01EUG8B-5 CDS4798 3429 + 0.30417
 
Dictyostelium lacteum
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
g3782 DLA_04192 GAOABQK02G7M1S CDS559788 3381 - 0.359065
g5220 DLA_05791 GAOABQK02HUB3S CDS960681 1719 - 0.329843
g5739 DLA_06401 GAOABQK02IBA3P CDS327191 3069 - 0.358749
 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
g2597 PPL_02927 DPPA0090b03.f1-3_y_part1 CDS867633 2898 + 0.352657
g2712 PPL_03056 DPPA0090b03.f1-3_y_part1 CDS1208675 3255 + 0.369892
g3173 PPL_03596 DPPA0255d09.f1-5 CDS134215 1809 + 0.422333
g6691 PPL_07490 EVG8W8Q01C9YYY-5_part2 CDS101780 3150 + 0.439683
g8701 PPL_12338 EVKQ3GG01DOIJB_part1 CDS796585 3399 - 0.414828