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2024-05-19 20:14:46

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Dictyostelium lacteum

Number of genes found: 101

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10066 DLA_11235 GLQOFTK02JL55Q CDS736563 2583 - 0.348045
g10141 DLA_11328 GLQOFTK02JL55Q CDS908863 3234 - 0.365801
g1140 DLA_01258 superoxide dismutase of the SOD1 family expressed at constant levels throughout the life cycle and upregulated upon oxidative stress enriched in prespore cellsF4PJNLW01A00V1 CDS1151652 459 - 0.407407
g1310 DLA_01434 F4PJNLW01B0TO9 CDS44114 1947 + 0.280431
g1377 DLA_01509 F4PJNLW01B0TO9 CDS198101 1884 + 0.295117
g1585 DLA_01739 P-type ATPase (E1-E2) ortholog of human ATP9B and yeast NEO1 which is involved in transport from the Golgi to the ERF4PJNLW01B0TO9 CDS655356 3540 - 0.35
g1824 DLA_01989 F4PJNLW01C9MXC CDS141969 2637 + 0.332196
g1944 DLA_02128 F4PJNLW01DERRH CDS149745 2712 - 0.344027
g1989 DLA_02183 F4PJNLW01DERRH CDS257541 3534 + 0.338427
g2001 DLA_02198 F4PJNLW01DERRH CDS284469 3387 + 0.317095
g2268 DLA_02504 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimersF4PJNLW01EE5MJ CDS170057 2556 - 0.330595
g2284 DLA_02526 F4PJNLW01EE5MJ CDS202874 3267 - 0.373125
g2340 DLA_02590 ZIP family zinc transporter LZT subfamily member contains 8 transmembrane domains expressed in pstAB cellsF4PJNLW01EE5MJ CDS323676 885 + 0.281356
g2508 DLA_02781 F4PJNLW01EE5MJ CDS706288 2118 + 0.352691
g2579 DLA_02862 catalyzes the reaction NADPH n oxidized hemoprotein NADP() n reduced hemoprotein similar to the H. sapiens POR protein that is defect in adrenal hyperplasia variant type (AHV) a syndrome with disordered steroidogenesisF4PJNLW01EE5MJ CDS866908 1932 - 0.371636
g2714 DLA_03010 F4PJNLW01EE5MJ CDS1154444 4911 - 0.321116
g2765 DLA_03064 F4PJNLW02GJ9ZB CDS26317 3153 + 0.338091
g2887 DLA_03200 ortholog of bacterial Mgsup2sup transporter mgtA contains eight transmembrane domainsF4PJNLW02HBBIY CDS22158 2820 - 0.375532
g2900 DLA_03215 catalyzes the reaction ATP Hsub2subO Nasupsupn Ksupsupout ADP phosphate Nasupsupout Ksupsupn br contains 10 transmembrane domainsF4PJNLW02HBBIY CDS55334 3594 + 0.378687
g2931 DLA_03246 F4PJNLW02HBBIY CDS116483 801 + 0.360799
g3044 DLA_11551 F4PJNLW02HBBIY CDS382889 1017 - 0.368732
g3241 DLA_03589 GAOABQK02G6SYV CDS27606 1335 - 0.367041
g3381 DLA_03738 GAOABQK02G6SYV CDS334425 1299 - 0.357198
g3578 DLA_03962 GAOABQK02G7M1S CDS93700 2844 + 0.360408
g3592 DLA_03983 GAOABQK02G7M1S CDS133452 3414 - 0.356766
g367 DLA_00409 contig05409_1.exp CDS842702 2277 + 0.348265
g368 DLA_00410 contig05409_1.exp CDS845124 1605 - 0.290966
g370 DLA_00412 contig05409_1.exp CDS849111 4869 + 0.326761
g3700 DLA_04099 GAOABQK02G7M1S CDS390242 204 - 0.338235
g3834 DLA_04252 ZIP family zinc transporter LZT subfamily member contains 8 transmembrane domains expressed in pstAB cellsGAOABQK02G7M1S CDS688757 1176 - 0.292517
g3883 DLA_04305 GAOABQK02GQAQJ CDS32831 864 - 0.278935
g4075 DLA_04519 GAOABQK02GQAQJ CDS466040 2841 - 0.339317
g4107 DLA_04553 GAOABQK02GQAQJ CDS532794 1113 + 0.327942
g4169 DLA_04617 GAOABQK02GQAQJ CDS657047 3006 - 0.314039
g4210 DLA_04656 GAOABQK02GQAQJ CDS733574 1152 - 0.352431
g424 DLA_00470 P-type ATPase (E1-E2) highly similar to human ATP8A1 believed to be involved in the transport of aminophospholipidscontig05409_1.exp CDS959789 4086 + 0.367107
g4240 DLA_04687 GAOABQK02GQAQJ CDS801644 3270 + 0.336391
g4275 DLA_04720 GAOABQK02GQAQJ CDS887264 1806 + 0.330011
g4388 DLA_04851 belongs to a family of zinc transporters that are integral membrane proteins which are found to increase tolerance to divalent metal ions contains 6 putative transmembrane domainsGAOABQK02GRIAE CDS91802 1668 - 0.317746
g4422 DLA_04889 GAOABQK02GRIAE CDS176484 1617 - 0.303649
g4550 DLA_05043 GAOABQK02H81I9 CDS253731 1731 + 0.33911
g4611 DLA_05107 P-type ATPase (E1-E2) highly similar to human ATP8A1 believed to be involved in the transport of aminophospholipidsGAOABQK02H81I9 CDS394523 3450 + 0.346087
g4904 DLA_05427 GAOABQK02HUB3S CDS187169 1647 + 0.352155
g500 DLA_00553 contig05409_1.exp CDS1146688 912 + 0.345395
g5090 DLA_05638 GAOABQK02HUB3S CDS607415 1278 + 0.335681
g5115 DLA_05664 very similar to A. thaliana AHL and SAL1 phosphatases and S. pombe tol1 (halotolerance protein) all related to the S. cerevisiae HAL2 these proteins are 3'-phosphoadenosine-5'-phosphate (PAP) phosphatases that also act as inositol polyphosphate 1-phosphatases.GAOABQK02HUB3S CDS667626 1011 - 0.339268
g5238 DLA_05812 GAOABQK02HUB3S CDS1005470 1524 - 0.322178
g5239 DLA_05813 GAOABQK02HUB3S CDS1007273 1401 - 0.309779
g5251 DLA_05828 GAOABQK02HUB3S CDS1033963 744 + 0.302419
g5276 DLA_05853 GAOABQK02HUB3S CDS1086420 3279 + 0.345837
g5599 DLA_06244 GAOABQK02HUB3S CDS1843423 1248 + 0.329327
g5616 DLA_06261 GAOABQK02IBA3P CDS13386 1188 + 0.319024
g5854 DLA_06529 ortholog of the human SOD2 the mitochondrial superoxide dismutase belongs to the ironmanganese superoxide dismutase familyGAOABQK02IBA3P CDS575948 660 - 0.365152
g5997 DLA_06679 homologous to bacterial genes that are involved in the transport of arsenate selenate and other anionic compounds outside the cellGAOABQK02IBA3P CDS944113 993 - 0.311178
g6017 DLA_06701 GAOABQK02IBA3P CDS985960 2268 + 0.338624
g6061 DLA_06748 GAOABQK02IBA3P CDS1077036 3759 - 0.320032
g6218 DLA_06929 GAOABQK02IO52T CDS286642 1476 + 0.348916
g6371 DLA_07091 GAOABQK02IO52T CDS612802 1539 - 0.339181
g6431 DLA_07156 GAOABQK02JBK0O CDS40849 585 + 0.34188
g6489 DLA_07224 GAOABQK02JEBFV CDS32112 1551 + 0.348162
g6537 DLA_07280 catalyzes the reaction NADPH n oxidized hemoprotein NADP() n reduced hemoprotein involved in the metabolism of compounds that control Dictyostelium cell differentiationGAOABQK02JOCCH CDS79667 1893 + 0.384046
g6775 DLA_07547 GAOABQK02JOCCH CDS625765 420 - 0.280952
g6776 DLA_07548 GAOABQK02JOCCH CDS626390 576 + 0.289931
g6848 DLA_07633 GAOABQK02JOCCH CDS798148 1809 + 0.310669
g6910 DLA_07706 GLQOFTK02FH5TG CDS52915 1503 + 0.342648
g6911 DLA_07707 GLQOFTK02FH5TG CDS54997 1104 + 0.326087
g692 DLA_00764 F4PJNLW01A00V1 CDS123009 1257 + 0.412888
g693 DLA_00765 F4PJNLW01A00V1 CDS124627 1254 + 0.357257
g7216 DLA_08052 contains eight transmembrane domains there is a second copy of this gene GLQOFTK02FH5TG CDS738361 3552 - 0.37134
g7291 DLA_08144 GLQOFTK02FH5TG CDS908615 2283 - 0.385458
g7322 DLA_08182 GLQOFTK02FH5TG CDS986706 2640 - 0.338636
g7390 DLA_08263 NRAMP family protein similar to bacterial manganese transport protein mntH contains 12 transmembrane domains involved in iron homeostasis and resistance to pathogenic bacteriaGLQOFTK02FH5TG CDS1141470 1635 - 0.313761
g7460 DLA_08345 member of the Dyp-type peroxidase family lacking a typical heme-binding region does not appear to be present in higher organisms there is a second copy of this gene GLQOFTK02FH5TG CDS1309398 1965 + 0.281425
g7678 DLA_08586 GLQOFTK02G2F2O CDS253171 6300 - 0.329524
g7767 DLA_08685 GLQOFTK02G2F2O CDS487671 573 + 0.26178
g7860 DLA_08790 P-type ATPase (E1-E2) highly similar to human ATP8A1 believed to be involved in the transport of aminophospholipidsGLQOFTK02G2F2O CDS678460 3597 - 0.352238
g7965 DLA_08900 GLQOFTK02G2F2O CDS908478 1134 + 0.386243
g7991 DLA_08927 GLQOFTK02G2F2O CDS960624 1485 - 0.317172
g8236 DLA_11763 GLQOFTK02G2F2O CDS1541296 1422 + 0.331927
g826 DLA_00906 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimers br bNomenclature conflict:b Do not confuse this gene with clc also known as clcA encoding the clathrin light chainF4PJNLW01A00V1 CDS400235 2616 - 0.365443
g827 DLA_00907 F4PJNLW01A00V1 CDS403659 1371 + 0.391685
g830 DLA_00910 similar to Arabidopsis AMT1 involved in transporting ammonia in the environment into the cell contains 11 transmembrane domainsF4PJNLW01A00V1 CDS413597 1302 + 0.361751
g8328 DLA_09294 GLQOFTK02G2F2O CDS1731320 1677 - 0.335122
g8443 DLA_09415 GLQOFTK02G2F2O CDS1948145 2280 + 0.309211
g8658 DLA_09653 GLQOFTK02GHM7A CDS402528 2721 + 0.338111
g8686 DLA_09682 GLQOFTK02GHM7A CDS462627 2409 + 0.350353
g8699 DLA_09695 GLQOFTK02GHM7A CDS489002 3639 - 0.335532
g8704 DLA_09700 GLQOFTK02GHM7A CDS504242 1575 + 0.309841
g8718 DLA_09714 catalyzes the reaction 2Hsub2subOsub2sub catalase 2Hsub2subO Osub2sub expressed throughout development expression restricted to prestalk cells during post-aggregationbr bNomenclature conflict:b Do not confuse the acrA gene encoding the late development adenylate cyclase ACR with the genetic locus acrA corresponding to the catA catalase that confers resistance to acriflavin (GLQOFTK02GHM7A CDS537522 1482 - 0.409582
g8726 DLA_09723 GLQOFTK02GHM7A CDS554712 1785 + 0.372549
g8757 DLA_09753 GLQOFTK02GHM7A CDS621454 1257 - 0.324582
g9007 DLA_10029 similar to Arabidopsis AMT1 involved in transporting ammonia in the environment into the cell contains 11 transmembrane domainsGLQOFTK02GQ36N CDS325674 2499 - 0.339336
g9023 DLA_10044 catalyzes the reaction ATP Hsub2subO Nasupsupn Ksupsupout ADP phosphate Nasupsupout Ksupsupn br contains 10 transmembrane domainsGLQOFTK02GQ36N CDS353185 3483 - 0.347402
g907 DLA_01002 F4PJNLW01A00V1 CDS600317 3663 + 0.340977
g9223 DLA_10274 GLQOFTK02GUKFG CDS160293 2016 + 0.373512
g9249 DLA_10304 GLQOFTK02GUKFG CDS217251 2070 + 0.329469
g9381 DLA_10452 GLQOFTK02GUKFG CDS515519 2829 - 0.339343
g9484 DLA_10571 GLQOFTK02IJPNF CDS6637 1104 - 0.322464
g9515 DLA_10605 GLQOFTK02IJPNF CDS76485 993 - 0.336354
g9593 DLA_10695 GLQOFTK02IJPNF CDS256147 768 - 0.286458
g9621 DLA_10725 GLQOFTK02IRMR1 CDS43505 1566 + 0.35696