Gene list
Applied filters:
COG category: Cell motility
Organism: Dictyostelium discoideum AX4, AX4
Number of genes found: 29
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Dictyostelium discoideum AX4, AX4 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
DDB_G0267590 | DDB_G0267590 | DDB0232428 | CDS | 381029 | 1386 | - | 0.3557 | |
DDB_G0271968 | DDB_G0271968 | similar to human LMAN1 (lectin mannose-binding protein 1) belongs to the legume-like lectin family contains 1 predicted transmembrane domain similar to D. purpureum protein | DDB0232429 | CDS | 1086145 | 1710 | + | 0.281287 |
DDB_G0272358 | DDB_G0272358 | DDB0232429 | CDS | 1293361 | 753 | + | 0.243028 | |
DDB_G0272398 | DDB_G0272398 | DDB0232429 | CDS | 1448193 | 306 | + | 0.316993 | |
DDB_G0275301 | DDB_G0275301 | DDB0232429 | CDS | 5275007 | 1035 | - | 0.311111 | |
DDB_G0275487 | DDB_G0275487 | DDB0232429 | CDS | 5992334 | 957 | + | 0.272727 | |
DDB_G0276735 | DDB_G0276735 | DDB0232429 | CDS | 7162758 | 792 | + | 0.27904 | |
DDB_G0277933_ps | DDB_G0277933 | putative pseudogene similar to D. discoideum gene | DDB0232430 | CDS | 30749 | 396 | + | 0.292929 |
DDB_G0279731 | DDB_G0279731 | DDB0232430 | CDS | 2431375 | 798 | + | 0.256892 | |
DDB_G0280285 | DDB_G0280285 | weakly similar to ints8 component of a multiprotein mediator of small nuclear RNA processing | DDB0232430 | CDS | 3206520 | 597 | + | 0.247906 |
DDB_G0280457 | DDB_G0280457 | DDB0232430 | CDS | 3378782 | 1278 | - | 0.29421 | |
DDB_G0280655 | DDB_G0280655 | DDB0232430 | CDS | 3616454 | 189 | + | 0.354497 | |
DDB_G0282965 | DDB_G0282965 | DDB0232431 | CDS | 68065 | 972 | - | 0.246914 | |
DDB_G0284881 | DDB_G0284881 | DDB0232431 | CDS | 2585806 | 612 | + | 0.26634 | |
DDB_G0285623 | DDB_G0285623 | DDB0232431 | CDS | 3480410 | 801 | - | 0.273408 | |
DDB_G0287445 | DDB_G0287445 | conserved protein ortholog of the human C11orf2 (Chromosome 11 Open Reading Frame 2) protein contains a putative Dor1 domain which in yeast is involved in vesicle targeting to the Golgi apparatus and complexes with a number of other trafficking proteins | DDB0232432 | CDS | 177577 | 2754 | + | 0.289397 |
DDB_G0288041 | DDB_G0288041 | DDB0232432 | CDS | 1011026 | 8853 | + | 0.276403 | |
DDB_G0291155 | DDB_G0291155 | DDB0232432 | CDS | 5058540 | 936 | - | 0.317308 | |
DDB_G0292058 | DDB_G0292058 | contains a weak tweety (tty) domain which is of unknown function | DDB0232433 | CDS | 1121898 | 1662 | - | 0.316486 |
DDB_G0292906 | DDB_G0292906 | DDB0232433 | CDS | 2252539 | 372 | - | 0.290323 | |
DDB_G0293644 | DDB_G0293644 | DDB0232433 | CDS | 3198630 | 1374 | + | 0.279476 | |
sdhaf1A | DDB_G0289475 | DDB0232432 | CDS | 2834711 | 276 | - | 0.264493 | |
sec11 | DDB_G0276359 | ortholog of the conserved SEC11 the signal peptidase complex is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum contains two putative transmembrane domains | DDB0232429 | CDS | 6742578 | 540 | - | 0.303704 |
sigJ | DDB_G0269254 | weakly related to blackjack a protein associated with microtubules but without similarity to MAPs regulated by the MADS-box transcription factor SrfA during development expressed in prespore cells | DDB0232428 | CDS | 3751652 | 1074 | + | 0.335196 |
talB | DDB_G0287505 | talin with an unusual villin headpiece-like domain involved in multicellular development and in autophagic cell death | DDB0232432 | CDS | 376738 | 7845 | + | 0.391714 |
trappc2 | DDB_G0282887 | DDB0232430 | CDS | 6341041 | 402 | - | 0.238806 | |
trappc2l | DDB_G0292690 | DDB0232433 | CDS | 1953634 | 423 | - | 0.238771 | |
vps2B | DDB_G0292400 | putative ortholog of human CHMP2A (Chromatin Modifying Protein 2A) and yeast DID4 (Doa4-Independent Degradation) component of the ESCRT-III complex (endosomal sorting complex required for transport) | DDB0232433 | CDS | 1551408 | 597 | - | 0.296482 |
vps46 | DDB_G0267394 | DDB0232428 | CDS | 1659361 | 579 | - | 0.305699 |