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2024-05-19 15:41:06

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Polysphondylium pallidum, PN500

Number of genes found: 119

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10042 PPL_10571 EXOLTKG01B86TH-3_part2 CDS466354 1155 - 0.338528
g10167 PPL_10699 EXOLTKG01B86TH-3_part2 CDS817816 945 - 0.409524
g10346 PPL_10896 EXOLTKG01B86TH-3y_part1 CDS437259 1179 + 0.439355
g10442 PPL_11002 ortholog of the mammalian geranylgeranyl diphosphate synthase 1 includes the enzymes dimethylallyltransferase (EC 2.5.1.1) geranyltranstransferase (EC 2.5.1.10) and farnesyltranstransferase (EC 2.5.1.29)EXOLTKG02GJRTE-5 CDS135514 903 + 0.339978
g10446 PPL_11009 EXOLTKG02GJRTE-5 CDS149232 1350 - 0.432593
g10552 PPL_11134 EXOLTKG02GJRTE-5 CDS442815 1503 - 0.331337
g1062 PPL_12772 DPPA0061d07.r1-5 CDS1033235 882 + 0.403628
g10802 PPL_13650 PN500-F-W-a08d11.p658-5_part2 CDS694962 735 - 0.428571
g10847 PPL_11439 PN500-F-W-a08d11.p658-5_part2 CDS811478 1407 - 0.35892
g10961 PPL_11707 PN500-G-d-37g01.f1-5 CDS72573 555 - 0.338739
g11102 PPL_11855 PN500-G-d-72b01.r1-5 CDS356785 876 + 0.349315
g1113 PPL_01293 DPPA0061d07.r1-5 CDS1193443 279 + 0.329749
g11189 PPL_11948 PN500-G-d-72b01.r1-5 CDS578778 987 - 0.49848
g11190 PPL_11949 PN500-G-d-72b01.r1-5 CDS580137 1230 + 0.443089
g11367 PPL_11661 PN500-G-d-188d09.r1-5 CDS282061 900 - 0.354444
g11368 PPL_11662 contains a SAM (and some other nucleotide) binding motif similar to bacterial and eukaryotic methyltransferasesPN500-G-d-188d09.r1-5 CDS283702 813 - 0.346863
g1347 PPL_01558 STE SerThr protein kinase family mitogen-activated protein kinase kinase involved in chemotaxis and early development phosphorylates the MAP kinase Erk1 (erkA) is sumoyalated by sumo and ubiquinated by mip1DPPA0090b03.f1-3_x_part3 CDS94259 2307 - 0.35674
g1425 PPL_01642 DPPA0090b03.f1-3_x_part3 CDS318353 264 + 0.337121
g1501 PPL_01730 DPPA0090b03.f1-3_x_part3 CDS536039 1566 + 0.422094
g1543 PPL_01778 DPPA0090b03.f1-3_x_part3 CDS653497 762 - 0.426509
g1588 PPL_12842 DPPA0090b03.f1-3_x_part3 CDS769305 768 + 0.411458
g1591 PPL_01825 DPPA0090b03.f1-3_x_part3 CDS774519 1149 - 0.360313
g175 PPL_00279 DPPA0004F08.r1-5_part2 CDS481007 1182 - 0.401015
g1938 PPL_02195 DPPA0090b03.f1-3_x_part3 CDS1793949 1983 + 0.348462
g2144 PPL_02422 DPPA0090b03.f1-3_x_part3 CDS2389027 828 - 0.36715
g2148 PPL_02427 DPPA0090b03.f1-3_x_part3 CDS2398591 645 + 0.342636
g2151 PPL_02429 DPPA0090b03.f1-3_x_part3 CDS2400832 1818 + 0.428493
g2217 PPL_02507 DPPA0090b03.f1-3_x_part4 CDS161175 2118 - 0.439566
g2231 PPL_02527 DPPA0090b03.f1-3_x_part4 CDS207199 1389 + 0.481641
g2270 PPL_02573 DPPA0090b03.f1-3_y_part1 CDS7007 1023 + 0.343109
g2325 PPL_02636 DPPA0090b03.f1-3_y_part1 CDS168335 558 - 0.335125
g2382 PPL_02688 DPPA0090b03.f1-3_y_part1 CDS300870 1884 + 0.357749
g2505 PPL_02823 DPPA0090b03.f1-3_y_part1 CDS640702 1041 - 0.414025
g2606 PPL_02936 DPPA0090b03.f1-3_y_part1 CDS888999 921 - 0.384365
g2623 PPL_12971 catalyzes the conversion of delta-aminolevulinic acid to porphobilinogen the second step in heme biosynthesisDPPA0090b03.f1-3_y_part1 CDS949847 1008 - 0.458333
g264 PPL_00372 DPPA0004F08.r1-5_part2 CDS760796 1080 + 0.357407
g2794 PPL_03148 DPPA0090b03.f1-3_y_part1 CDS1444144 999 - 0.49049
g2848 PPL_03202 DPPA0090b03.f1-3_y_part1 CDS1590823 1194 + 0.436348
g2849 PPL_03203 DPPA0090b03.f1-3_y_part1 CDS1592408 795 + 0.368553
g287 PPL_00400 DPPA0004F08.r1-5_part2 CDS836210 1326 + 0.450226
g2906 PPL_03261 DPPA0090b03.f1-3_y_part1 CDS1733524 819 - 0.40293
g3078 PPL_03452 DPPA0090b03.f1-3_y_part1 CDS2193666 585 + 0.367521
g3132 PPL_03550 DPPA0255d09.f1-5 CDS18911 330 + 0.390909
g3148 PPL_03570 DPPA0255d09.f1-5 CDS70435 1281 - 0.374707
g3149 PPL_03571 DPPA0255d09.f1-5 CDS72401 1284 - 0.435358
g3157 PPL_03579 DPPA0255d09.f1-5 CDS92595 2022 - 0.3818
g3220 PPL_03655 DPPB0337b12.r1-5 CDS26413 888 - 0.432432
g3296 PPL_03733 DPPB0337b12.r1-5 CDS223908 588 + 0.391156
g3381 PPL_03830 DPPB0337b12.r1-5 CDS463274 1893 + 0.465399
g3433 PPL_03892 DPPB0337b12.r1-5 CDS599360 1488 + 0.421371
g3439 PPL_03899 DPPB0337b12.r1-5 CDS621831 1410 - 0.476596
g3478 PPL_03938 DPPB0337b12.r1-5 CDS718975 2130 - 0.456338
g3600 PPL_04069 DPPB0337b12.r1-5 CDS1070654 1464 + 0.43306
g3754 PPL_04242 DPPB0360e11.f1-5 CDS156390 864 - 0.452546
g3963 PPL_04474 DPPB0360e11.f1-5 CDS801990 714 - 0.359944
g4147 PPL_04676 E0KFERV02EE9X2-3_part1 CDS301949 1818 + 0.40484
g421 PPL_00542 DPPA0004F08.r1-5_part2 CDS1229873 897 + 0.405797
g425 PPL_00546 DPPA0004F08.r1-5_part2 CDS1237053 2802 + 0.390792
g4346 PPL_04910 catalyzes the reaction ATP (R)-pantoate beta-alanine AMP diphosphate (R)-pantothenateE0KFERV02EE9X2-3_part1 CDS892313 888 - 0.476351
g4648 PPL_05265 E3JQK7F01EFZL8-5 CDS18091 1452 + 0.356061
g5096 PPL_05746 E3JQK7F01EFZL8-5 CDS1286830 1368 - 0.39693
g5278 PPL_05931 E3JQK7F02G10GF-5 CDS353831 3177 - 0.416116
g5322 PPL_05971 E3JQK7F02G10GF-5 CDS465259 795 + 0.454088
g5364 PPL_06019 phosphorylates pyridoxal to pyridoxal 5'-phosphate member of the TKL (tyrosine kinase-like) group of protein kinases belongs to the MLK protein kinase familyE3JQK7F02G10GF-5 CDS590597 924 + 0.363636
g5476 PPL_06146 E3JQK7F02GERJ7-5 CDS61783 1041 - 0.394813
g551 PPL_00684 DPPA0004F08.r1-5_part3 CDS54836 1698 - 0.448174
g5571 PPL_06236 E3JQK7F02HEVRT-5 CDS77018 1140 - 0.396491
g5796 PPL_06491 contains a SAM (and some other nucleotide) binding motif similar to bacterial and eukaryotic methyltransferasesE3JQK7F02HP6OU-5 CDS36146 840 + 0.384524
g5988 PPL_06705 E3JQK7F02HW0LE-5_part2 CDS286717 597 - 0.428811
g5995 PPL_06717 E3JQK7F02HW0LE-5_part2 CDS310750 987 + 0.454914
g6246 PPL_06980 E3JQK7F02HW0LE-5_part2 CDS978788 3372 + 0.406584
g6293 PPL_07030 E3JQK7F02HW0LE-5_part2 CDS1133676 786 - 0.463104
g6453 PPL_07217 E3JQK7F02HW0LE-5_part2 CDS1611808 987 - 0.325228
g7135 PPL_07950 EVG8W8Q02J3HU6-3_part2 CDS151114 831 + 0.347774
g7267 PPL_08108 EVG8W8Q02J3HU6-3_part3 CDS165556 1137 + 0.408971
g7512 PPL_08388 EVG8W8Q02J3HU6-3_part3 CDS839974 1008 + 0.40873
g7535 PPL_08414 EVG8W8Q02J3HU6-3_part3 CDS907160 2193 + 0.326037
g7590 PPL_08484 catalyzes the reaction nicotinate D-ribonucleotide diphosphate COsub2sub pyridine-23-dicarboxylate 5-phospho-alpha-D-ribose 1-diphosphateEVG8W8Q02J3HU6-3_part3 CDS1078701 882 + 0.424036
g7594 PPL_08487 EVG8W8Q02J3HU6-3_part3 CDS1093593 468 + 0.470085
g760 PPL_00916 DPPA0061d07.r1-5 CDS170895 1467 + 0.404908
g7665 PPL_08567 EVKQ3GG01CS5PZ-3_part1 CDS47805 897 - 0.3534
g7693 PPL_08598 EVKQ3GG01CS5PZ-3_part1 CDS123671 1146 + 0.417103
g7714 PPL_08622 EVKQ3GG01CS5PZ-3_part1 CDS187996 417 + 0.36211
g7906 PPL_08835 EVKQ3GG01CS5PZ-3_part1 CDS751021 2007 + 0.430493
g7941 PPL_08877 similar to S. cerevisiae LCB1 dimerizes with SptB to catalyze the conversion of palmitoyl-CoA L-serine into CoA 3-dehydro-D-sphinganine COsub2subEVKQ3GG01CS5PZ-3_part1 CDS895696 1329 + 0.439428
g8031 PPL_08970 EVKQ3GG01CS5PZ-3_part1 CDS1155980 705 + 0.435461
g8082 PPL_09025 EVKQ3GG01CS5PZ-3_part1 CDS1287529 1605 + 0.437383
g823 PPL_00991 DPPA0061d07.r1-5 CDS378319 879 - 0.391354
g8278 PPL_09234 EVKQ3GG01CS5PZ-3_part1 CDS1838551 1422 + 0.481716
g8345 PPL_09304 EVKQ3GG01CS5PZ-3_part2 CDS159893 741 + 0.300945
g842 PPL_12734 DPPA0061d07.r1-5 CDS419380 1698 + 0.378681
g843 PPL_12735 DPPA0061d07.r1-5 CDS421175 792 + 0.483586
g8472 PPL_12077 EVKQ3GG01DOIJB_part1 CDS113469 1068 + 0.330524
g8536 PPL_12155 EVKQ3GG01DOIJB_part1 CDS321177 1236 + 0.43932
g8597 PPL_12227 EVKQ3GG01DOIJB_part1 CDS499468 1875 + 0.4144
g8632 PPL_12265 EVKQ3GG01DOIJB_part1 CDS594877 975 - 0.386667
g8678 PPL_12313 catalyzes the reaction squalene AH2 O2 (S)-squalene-23-epoxide A H2O catalyzes the first oxygenation step in sterol biosynthesisEVKQ3GG01DOIJB_part1 CDS732085 1620 - 0.467901
g880 PPL_12741 DPPA0061d07.r1-5 CDS511204 804 + 0.339552
g8879 PPL_12524 catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) which elevates cellular NAD levels and prevent oxidative stressEVKQ3GG01DOIJB_part2 CDS461872 1767 + 0.419921
g8895 PPL_12542 EVKQ3GG01DOIJB_part2 CDS515507 897 + 0.382386
g9057 PPL_09484 EVKQ3GG02I325Y-5_part1 CDS199318 1107 + 0.467931
g9119 PPL_09551 EVKQ3GG02I325Y-5_part1 CDS397872 795 - 0.366038
g913 PPL_01081 DPPA0061d07.r1-5 CDS629949 1167 + 0.45587
g9228 PPL_09655 highly similar to mammalian SAHH (catalyzes the hydrolysis of S-adenosyl-L-homocysteine into adenosine and homocysteine) localizes to actin rods found in sporesEVKQ3GG02I325Y-5_part1 CDS697557 1305 + 0.496552
g9239 PPL_09670 EVKQ3GG02I325Y-5_part1 CDS728776 696 - 0.295977
g9251 PPL_09686 EVKQ3GG02I325Y-5_part1 CDS760359 852 + 0.444836
g9252 PPL_09687 EVKQ3GG02I325Y-5_part1 CDS761539 870 + 0.403448
g9262 PPL_09697 EVKQ3GG02I325Y-5_part1 CDS787279 1302 - 0.379416
g9402 PPL_09856 EVKQ3GG02I325Y-5_part1 CDS1208633 1392 - 0.296695
g953 PPL_12757 DPPA0061d07.r1-5 CDS740935 204 - 0.352941
g9535 PPL_10011 EWNM59D01C4IL7-5_part1 CDS104733 690 - 0.357971
g9536 PPL_10012 EWNM59D01C4IL7-5_part1 CDS107214 924 + 0.471861
g954 PPL_12758 catalyzes the reaction 3-phospho-hydroxypyruvate L-glutamate 2-oxoglutarate 3-phospho-serineDPPA0061d07.r1-5 CDS741456 900 - 0.412222
g9541 PPL_10018 EWNM59D01C4IL7-5_part1 CDS120603 3090 + 0.456634
g9611 PPL_13560 EWNM59D01C4IL7-5_part1 CDS311346 552 - 0.367754
g9642 PPL_10126 EWNM59D01C4IL7-5_part1 CDS397011 1305 - 0.409195
g9716 PPL_10210 EWNM59D01C4IL7-5_part1 CDS635151 1479 - 0.445571
g9813 PPL_10329 EWNM59D01C4IL7-5_part1 CDS936547 549 + 0.386157
g9897 PPL_10419 EXOLTKG01B86TH-3_part2 CDS2890 864 + 0.466435