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2024-05-19 14:50:52

Gene list

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COG category: Chromatin structure and dynamics
Organism: Polysphondylium pallidum, PN500

Number of genes found: 60

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10019 PPL_10545 EXOLTKG01B86TH-3_part2 CDS361931 4890 - 0.358896
g10303 PPL_10857 EXOLTKG01B86TH-3y_part1 CDS346255 2988 - 0.380522
g10372 PPL_10927 EXOLTKG01B86TH-3y_part2 CDS45836 1686 + 0.42586
g10643 PPL_11229 PN500-F-W-a08d11.p658-5_part2 CDS213021 7863 + 0.389419
g10921 PPL_11525 PN500-F-W-a08d11.p658-5_part2 CDS1045416 486 - 0.495885
g11047 PPL_11799 PN500-G-d-72b01.r1-5 CDS173824 4362 + 0.392481
g11147 PPL_11905 component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4PN500-G-d-72b01.r1-5 CDS474699 408 - 0.492647
g11227 PPL_11981 PN500-G-d-72b01.r1-5 CDS675127 6036 + 0.376574
g1145 PPL_01333 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasDPPA0061d07.r1-5 CDS1285022 4272 - 0.422285
g1281 PPL_01491 DPPA0090b03.f1-3_x_part2 CDS292465 321 - 0.47352
g1334 PPL_01546 DPPA0090b03.f1-3_x_part3 CDS66698 768 + 0.423177
g1577 PPL_01811 DPPA0090b03.f1-3_x_part3 CDS744780 2742 + 0.393873
g1722 PPL_01958 DPPA0090b03.f1-3_x_part3 CDS1118226 4608 + 0.463108
g1743 PPL_12869 DPPA0090b03.f1-3_x_part3 CDS1197602 4467 + 0.419521
g1985 PPL_02243 DPPA0090b03.f1-3_x_part3 CDS1927047 3198 - 0.449343
g2121 PPL_02394 DPPA0090b03.f1-3_x_part3 CDS2315397 828 - 0.375604
g2129 PPL_02403 DPPA0090b03.f1-3_x_part3 CDS2344831 1254 - 0.396332
g2626 PPL_02958 DPPA0090b03.f1-3_y_part1 CDS956311 3333 - 0.449745
g2841 PPL_03196 DPPA0090b03.f1-3_y_part1 CDS1564628 3561 + 0.450435
g3133 PPL_03551 DPPA0255d09.f1-5 CDS19894 3450 - 0.432464
g3161 PPL_03583 DPPA0255d09.f1-5 CDS102611 2166 + 0.39566
g3390 PPL_03843 DPPB0337b12.r1-5 CDS486215 2184 + 0.396062
g3415 PPL_03870 contains a MOZSAS-like domain (Monocytic leukemia Zinc fingerSomething About Silencing) predicted to have histone acetyltransferase activityDPPB0337b12.r1-5 CDS536426 1362 - 0.4163
g3650 PPL_04124 component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4DPPB0337b12.r1-5 CDS1191514 408 + 0.382353
g396 PPL_00512 DPPA0004F08.r1-5_part2 CDS1151696 321 + 0.479751
g4079 PPL_04601 similar to S. cerevisiae nonhistone chromosomal protein 6A and B (NCP6A and NCP6B) and mammalian HMGB2 contains a single HMG12 boxE0KFERV02EE9X2-3_part1 CDS106023 408 + 0.465686
g444 PPL_00570 DPPA0004F08.r1-5_part2 CDS1291308 4569 + 0.408186
g4480 PPL_05077 E3JQK7F01CUWUC-3_part1 CDS65008 1668 - 0.395683
g462 PPL_00589 DPPA0004F08.r1-5_part2 CDS1349273 3159 + 0.405192
g4698 PPL_05322 E3JQK7F01EFZL8-5 CDS183679 3570 + 0.39888
g49 PPL_00135 DPPA0004F08.r1-5_part2 CDS143414 678 + 0.386431
g5089 PPL_05739 E3JQK7F01EFZL8-5 CDS1266781 2193 - 0.443684
g51 PPL_00136 DPPA0004F08.r1-5_part2 CDS146451 648 + 0.390432
g5213 PPL_13222 component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4E3JQK7F02G10GF-5 CDS165196 414 + 0.463768
g5294 PPL_05947 E3JQK7F02G10GF-5 CDS398815 1212 - 0.445545
g548 PPL_00681 DPPA0004F08.r1-5_part3 CDS45400 5994 + 0.385385
g5670 PPL_06348 E3JQK7F02HEVRT-5 CDS383452 453 + 0.419426
g5757 PPL_13273 E3JQK7F02HEVRT-5 CDS667185 1431 - 0.379455
g578 PPL_00711 DPPA0004F08.r1-5_part3 CDS119020 1452 - 0.453168
g612 PPL_00744 DPPA0004F08.r1-5_part3 CDS217250 3255 + 0.399693
g6284 PPL_07019 E3JQK7F02HW0LE-5_part2 CDS1107265 2733 - 0.388218
g6349 PPL_07095 E3JQK7F02HW0LE-5_part2 CDS1305356 3666 + 0.355701
g6552 PPL_07326 contains a MOZSAS-like domain (Monocytic leukemia Zinc fingerSomething About Silencing) predicted to have histone acetyltransferase activityE3JQK7F02HW0LE-5_part2 CDS1881484 1443 + 0.404712
g6626 PPL_07411 EVG8W8Q01C9YYY-5_part1 CDS118381 1035 + 0.419324
g670 PPL_00807 DPPA0004F08.r1-5_part3 CDS372642 1557 - 0.390495
g6714 PPL_07515 EVG8W8Q01C9YYY-5_part2 CDS168200 12471 + 0.402614
g7249 PPL_08086 EVG8W8Q02J3HU6-3_part3 CDS111181 3474 + 0.34053
g735 PPL_00886 DPPA0061d07.r1-5 CDS98531 2916 + 0.332305
g7642 PPL_08539 EVG8W8Q02J3HU6-3_part3 CDS1213756 315 + 0.396825
g7799 PPL_08716 EVKQ3GG01CS5PZ-3_part1 CDS433935 459 + 0.350763
g8005 PPL_08948 atypical protein kinase belongs to the PIKK family of protein kinases similar to transformationtranscription domain-associated protein (TRRAP)EVKQ3GG01CS5PZ-3_part1 CDS1078944 12966 + 0.429585
g8006 PPL_08949 EVKQ3GG01CS5PZ-3_part1 CDS1092608 4197 - 0.423636
g8080 PPL_09023 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasEVKQ3GG01CS5PZ-3_part1 CDS1280112 5025 + 0.416119
g8432 PPL_09407 EVKQ3GG01DB4K7-5 CDS397 7002 + 0.458012
g8609 PPL_12238 EVKQ3GG01DOIJB_part1 CDS527136 4446 - 0.421502
g9066 PPL_09496 EVKQ3GG02I325Y-5_part1 CDS226115 2016 - 0.452381
g9436 PPL_09893 EVKQ3GG02I325Y-5_part1 CDS1323159 2460 - 0.408943
g9521 PPL_09994 EWNM59D01C4IL7-5_part1 CDS71987 726 - 0.392562
g9824 PPL_10340 EWNM59D01C4IL7-5_part1 CDS959812 3849 + 0.376202
g9826 PPL_10342 EWNM59D01C4IL7-5_part1 CDS964362 3678 + 0.383904