Gene list
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COG category: Cytoskeleton
Organism: Polysphondylium pallidum, PN500
Number of genes found: 121
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Polysphondylium pallidum, PN500 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
ChLim | PPL_01620 | contains a N-terminal Calponin Homology (CH) domain 3 LIM domains and 4 LIM-related domains (LRDs) | DPPA0090b03.f1-3_x_part3 | CDS | 264784 | 1950 | + | 0.398974 |
g10081 | PPL_10611 | EXOLTKG01B86TH-3_part2 | CDS | 559669 | 3048 | + | 0.354987 | |
g10201 | PPL_10742 | EXOLTKG01B86TH-3y_part1 | CDS | 11616 | 2871 | + | 0.415535 | |
g10246 | PPL_10791 | EXOLTKG01B86TH-3y_part1 | CDS | 160183 | 1110 | - | 0.452252 | |
g10476 | PPL_11051 | similar to the conserved MYO7A unconventional myosin required in Dictyostelium for phagocytosis and substrate adhesion | EXOLTKG02GJRTE-5 | CDS | 244004 | 7188 | + | 0.441013 |
g10508 | PPL_13625 | EXOLTKG02GJRTE-5 | CDS | 333441 | 648 | - | 0.432099 | |
g10509 | PPL_11089 | EXOLTKG02GJRTE-5 | CDS | 334272 | 246 | - | 0.402439 | |
g10510 | PPL_11090 | EXOLTKG02GJRTE-5 | CDS | 335004 | 1131 | - | 0.465075 | |
g10528 | PPL_11109 | EXOLTKG02GJRTE-5 | CDS | 374548 | 1122 | - | 0.424242 | |
g1073 | PPL_01246 | DPPA0061d07.r1-5 | CDS | 1077160 | 450 | + | 0.431111 | |
g10741 | PPL_11332 | PN500-F-W-a08d11.p658-5_part2 | CDS | 494680 | 1350 | + | 0.48 | |
g1105 | PPL_01284 | DPPA0061d07.r1-5 | CDS | 1173570 | 1095 | + | 0.4 | |
g11120 | PPL_11875 | PN500-G-d-72b01.r1-5 | CDS | 393727 | 423 | - | 0.404255 | |
g11220 | PPL_11975 | conditional processive motor protein that can move over long distances along F-actin without disassociating processiveness depends on high physiological Mgsup2sup concentrations | PN500-G-d-72b01.r1-5 | CDS | 645165 | 6579 | - | 0.439124 |
g1216 | PPL_01422 | DPPA0090b03.f1-3_x_part2 | CDS | 82405 | 1761 | - | 0.386144 | |
g1284 | PPL_01494 | DPPA0090b03.f1-3_x_part2 | CDS | 299699 | 3210 | + | 0.431464 | |
g1323 | PPL_01535 | belongs to the MCAKKif2 subfamily contains 1 SAM domain predicted to play a role in mitosis | DPPA0090b03.f1-3_x_part3 | CDS | 31601 | 2793 | - | 0.397422 |
g1406 | PPL_01622 | class 1 myosin lacking the traditional tail domains common to short-tailed myosins binds actin and is in complex with several other proteins involved in phagocytosis maintenance of cortical tension and motility | DPPA0090b03.f1-3_x_part3 | CDS | 269355 | 2628 | - | 0.467276 |
g1484 | PPL_01713 | 120 kDa F-actin binding protein also often called filamin involved in actin cytoskeleton organization motility and development enriched in prestalk cells | DPPA0090b03.f1-3_x_part3 | CDS | 484068 | 2571 | + | 0.495916 |
g1514 | PPL_01742 | DPPA0090b03.f1-3_x_part3 | CDS | 570594 | 6348 | + | 0.502363 | |
g1692 | PPL_01930 | DPPA0090b03.f1-3_x_part3 | CDS | 1033091 | 1083 | - | 0.399815 | |
g1713 | PPL_01950 | DPPA0090b03.f1-3_x_part3 | CDS | 1091267 | 3774 | + | 0.409115 | |
g1741 | PPL_01978 | belongs to the NCDKar3 subfamily predicted to play a role in mitosis | DPPA0090b03.f1-3_x_part3 | CDS | 1192106 | 2166 | + | 0.337488 |
g1772 | PPL_02013 | DPPA0090b03.f1-3_x_part3 | CDS | 1278286 | 5934 | - | 0.441355 | |
g2016 | PPL_02276 | DPPA0090b03.f1-3_x_part3 | CDS | 2022610 | 1083 | + | 0.462604 | |
g2033 | PPL_02293 | DPPA0090b03.f1-3_x_part3 | CDS | 2065364 | 546 | - | 0.391941 | |
g2043 | PPL_02307 | DPPA0090b03.f1-3_x_part3 | CDS | 2093418 | 1128 | - | 0.406028 | |
g2047 | PPL_02312 | DPPA0090b03.f1-3_x_part3 | CDS | 2111070 | 1251 | + | 0.372502 | |
g2077 | PPL_02345 | DPPA0090b03.f1-3_x_part3 | CDS | 2202016 | 2310 | + | 0.437229 | |
g2256 | PPL_02557 | DPPA0090b03.f1-3_x_part4 | CDS | 272640 | 7911 | + | 0.407155 | |
g2324 | PPL_02635 | DPPA0090b03.f1-3_y_part1 | CDS | 166814 | 1131 | - | 0.493369 | |
g2329 | PPL_02640 | component of the Dictyostelium Arp2Arp3 complex contributes to DdPPK2 activity also described as member of the polyphosphate kinase PPK3 family | DPPA0090b03.f1-3_y_part1 | CDS | 177415 | 1179 | - | 0.478372 |
g2354 | PPL_02661 | DPPA0090b03.f1-3_y_part1 | CDS | 236106 | 1083 | + | 0.500462 | |
g245 | PPL_00356 | DPPA0004F08.r1-5_part2 | CDS | 706438 | 2574 | - | 0.383061 | |
g2465 | PPL_02778 | DPPA0090b03.f1-3_y_part1 | CDS | 522785 | 3075 | - | 0.395447 | |
g2500 | PPL_02817 | DPPA0090b03.f1-3_y_part1 | CDS | 626203 | 2391 | - | 0.363028 | |
g2520 | PPL_12956 | DPPA0090b03.f1-3_y_part1 | CDS | 685506 | 600 | - | 0.503333 | |
g292 | PPL_00406 | DPPA0004F08.r1-5_part2 | CDS | 844954 | 1350 | + | 0.497778 | |
g2989 | PPL_03353 | DPPA0090b03.f1-3_y_part1 | CDS | 1956514 | 1278 | + | 0.406886 | |
g3480 | PPL_13071 | DPPB0337b12.r1-5 | CDS | 722126 | 2856 | + | 0.47619 | |
g3556 | PPL_04021 | DPPB0337b12.r1-5 | CDS | 936812 | 561 | - | 0.344029 | |
g3605 | PPL_04074 | DPPB0337b12.r1-5 | CDS | 1081884 | 2562 | + | 0.436768 | |
g3610 | PPL_04079 | DPPB0337b12.r1-5 | CDS | 1090054 | 1938 | - | 0.392157 | |
g3775 | PPL_13100 | contains three EF hands similar to mammalian neuron specific calcium-binding protein hippocalcin belongs to the frequenins a family of myristoyl-switch calcium-binding proteins | DPPB0360e11.f1-5 | CDS | 205070 | 687 | + | 0.379913 |
g3795 | PPL_04288 | DPPB0360e11.f1-5 | CDS | 278486 | 420 | - | 0.366667 | |
g3797 | PPL_04290 | DPPB0360e11.f1-5 | CDS | 282733 | 5349 | + | 0.412787 | |
g3841 | PPL_04342 | DPPB0360e11.f1-5 | CDS | 444192 | 1821 | - | 0.468424 | |
g3878 | PPL_04382 | DPPB0360e11.f1-5 | CDS | 552502 | 4251 | - | 0.453776 | |
g390 | PPL_00504 | DPPA0004F08.r1-5_part2 | CDS | 1139544 | 1005 | + | 0.422886 | |
g402 | PPL_00520 | DPPA0004F08.r1-5_part2 | CDS | 1169690 | 1305 | - | 0.396935 | |
g4114 | PPL_04640 | E0KFERV02EE9X2-3_part1 | CDS | 205350 | 4110 | - | 0.390754 | |
g4232 | PPL_04782 | E0KFERV02EE9X2-3_part1 | CDS | 587284 | 3816 | - | 0.338312 | |
g4313 | PPL_13157 | E0KFERV02EE9X2-3_part1 | CDS | 807438 | 444 | - | 0.439189 | |
g4319 | PPL_04879 | E0KFERV02EE9X2-3_part1 | CDS | 823012 | 2682 | - | 0.439597 | |
g4415 | PPL_05006 | centrosome-associated actin homolog contributes to the dynactin complex contributes to DdPPK2 activity also described as member of the polyphosphate kinase PPK3 family | E0KFERV02EE9X2-3_part2 | CDS | 186112 | 1161 | - | 0.439276 |
g4516 | PPL_05120 | E3JQK7F01CUWUC-3_part1 | CDS | 166945 | 1131 | - | 0.501326 | |
g4804 | PPL_05444 | E3JQK7F01EFZL8-5 | CDS | 498489 | 1131 | - | 0.498674 | |
g4806 | PPL_05446 | class I (unconventiona) myosin component of actin-based molecular motor | E3JQK7F01EFZL8-5 | CDS | 509815 | 3210 | - | 0.467601 |
g4939 | PPL_05585 | E3JQK7F01EFZL8-5 | CDS | 859398 | 1875 | - | 0.394133 | |
g4948 | PPL_05593 | E3JQK7F01EFZL8-5 | CDS | 885782 | 2646 | + | 0.383976 | |
g5015 | PPL_05657 | E3JQK7F01EFZL8-5 | CDS | 1069283 | 552 | - | 0.373188 | |
g5037 | PPL_05679 | E3JQK7F01EFZL8-5 | CDS | 1116247 | 3600 | + | 0.390556 | |
g5068 | PPL_05717 | E3JQK7F01EFZL8-5 | CDS | 1208172 | 5256 | - | 0.412861 | |
g5261 | PPL_05914 | component of actin-based molecular motor myosin II (conventional myosin) component | E3JQK7F02G10GF-5 | CDS | 300476 | 450 | - | 0.426667 |
g5271 | PPL_05924 | E3JQK7F02G10GF-5 | CDS | 329759 | 3750 | - | 0.3728 | |
g5302 | PPL_05952 | E3JQK7F02G10GF-5 | CDS | 411317 | 2070 | + | 0.391304 | |
g5340 | PPL_05993 | E3JQK7F02G10GF-5 | CDS | 521329 | 4653 | - | 0.419299 | |
g5360 | PPL_06016 | E3JQK7F02G10GF-5 | CDS | 580090 | 1167 | + | 0.401028 | |
g5380 | PPL_06037 | E3JQK7F02G10GF-5 | CDS | 628755 | 1476 | - | 0.370596 | |
g5524 | PPL_06192 | regulatory subunit of the Casup2supcalmodulin-dependent serinethreonine protein phosphatase contains an EF-hand calcium binding motif | E3JQK7F02GERJ7-5 | CDS | 198723 | 543 | - | 0.32965 |
g5532 | PPL_06198 | E3JQK7F02GERJ7-5 | CDS | 225943 | 3663 | + | 0.420693 | |
g5705 | PPL_06386 | E3JQK7F02HEVRT-5 | CDS | 494355 | 1131 | + | 0.494253 | |
g583 | PPL_00717 | DPPA0004F08.r1-5_part3 | CDS | 133619 | 1368 | + | 0.410088 | |
g5873 | PPL_06567 | E3JQK7F02HW0LE-5_part1 | CDS | 9893 | 1248 | + | 0.453526 | |
g6070 | PPL_06793 | E3JQK7F02HW0LE-5_part2 | CDS | 503158 | 1392 | - | 0.336925 | |
g6108 | PPL_06832 | E3JQK7F02HW0LE-5_part2 | CDS | 604374 | 5403 | - | 0.391819 | |
g6136 | PPL_06860 | kinesin-1 family protein belongs to the kinesin KHC subfamily binds microtubules in an ATP-dependent manner and bundles actin in vitro | E3JQK7F02HW0LE-5_part2 | CDS | 677205 | 2931 | - | 0.414193 |
g6211 | PPL_06943 | E3JQK7F02HW0LE-5_part2 | CDS | 874822 | 1146 | - | 0.465096 | |
g6238 | PPL_06970 | similar to RasGAP proteins contains one calponin homology domain and one rasGAP domain | E3JQK7F02HW0LE-5_part2 | CDS | 947044 | 4455 | - | 0.404714 |
g6272 | PPL_13319 | E3JQK7F02HW0LE-5_part2 | CDS | 1060068 | 1482 | - | 0.348853 | |
g6286 | PPL_07021 | E3JQK7F02HW0LE-5_part2 | CDS | 1111894 | 3336 | - | 0.430156 | |
g6677 | PPL_07477 | EVG8W8Q01C9YYY-5_part2 | CDS | 63590 | 1314 | + | 0.420852 | |
g6696 | PPL_07496 | conditional processive motor protein that can move over long distances along F-actin without disassociating processiveness depends on high physiological Mgsup2sup concentrations | EVG8W8Q01C9YYY-5_part2 | CDS | 114098 | 4752 | - | 0.422559 |
g6733 | PPL_07535 | EVG8W8Q01EEF2G-5 | CDS | 18337 | 2676 | - | 0.398729 | |
g6772 | PPL_07579 | EVG8W8Q01EEF2G-5 | CDS | 138267 | 1383 | - | 0.349964 | |
g6782 | PPL_07592 | EVG8W8Q01EEF2G-5 | CDS | 164490 | 1854 | + | 0.433657 | |
g6783 | PPL_07593 | EVG8W8Q01EEF2G-5 | CDS | 167917 | 1077 | + | 0.427112 | |
g679 | PPL_00817 | DPPA0004F08.r1-5_part3 | CDS | 396541 | 2343 | + | 0.374733 | |
g6824 | PPL_07637 | class I (unconventiona) myosin component of actin-based molecular motor | EVG8W8Q01EEF2G-5 | CDS | 286393 | 3015 | - | 0.45141 |
g6930 | PPL_07748 | EVG8W8Q02J3HU6-3_part1 | CDS | 235885 | 2979 | + | 0.426653 | |
g6936 | PPL_07754 | EVG8W8Q02J3HU6-3_part1 | CDS | 260219 | 1572 | + | 0.354326 | |
g6941 | PPL_07758 | EVG8W8Q02J3HU6-3_part1 | CDS | 278312 | 1371 | - | 0.477753 | |
g7102 | PPL_13381 | EVG8W8Q02J3HU6-3_part2 | CDS | 67303 | 1353 | - | 0.419069 | |
g7712 | PPL_08620 | EVKQ3GG01CS5PZ-3_part1 | CDS | 182289 | 2061 | + | 0.377972 | |
g7881 | PPL_08806 | EVKQ3GG01CS5PZ-3_part1 | CDS | 680168 | 1806 | + | 0.374308 | |
g790 | PPL_00951 | DPPA0061d07.r1-5 | CDS | 289283 | 3198 | - | 0.406504 | |
g7913 | PPL_08844 | EVKQ3GG01CS5PZ-3_part1 | CDS | 775011 | 1305 | + | 0.403831 | |
g7950 | PPL_08885 | EVKQ3GG01CS5PZ-3_part1 | CDS | 923738 | 3300 | - | 0.444545 | |
g8060 | PPL_09000 | EVKQ3GG01CS5PZ-3_part1 | CDS | 1217564 | 3576 | - | 0.459172 | |
g8658 | PPL_12292 | EVKQ3GG01DOIJB_part1 | CDS | 676296 | 1131 | + | 0.493369 | |
g8892 | PPL_12538 | EVKQ3GG01DOIJB_part2 | CDS | 509252 | 204 | - | 0.352941 | |
g8926 | PPL_12579 | EVKQ3GG01DOIJB_part2 | CDS | 609335 | 1131 | + | 0.488948 | |
g8960 | PPL_12620 | EVKQ3GG01DOIJB_part2 | CDS | 731427 | 4761 | + | 0.365469 | |
g9052 | PPL_09479 | EVKQ3GG02I325Y-5_part1 | CDS | 186628 | 2778 | + | 0.429446 | |
g9097 | PPL_09529 | EVKQ3GG02I325Y-5_part1 | CDS | 327535 | 5337 | - | 0.462807 | |
g9142 | PPL_09573 | EVKQ3GG02I325Y-5_part1 | CDS | 463558 | 444 | - | 0.371622 | |
g9202 | PPL_09632 | EVKQ3GG02I325Y-5_part1 | CDS | 623880 | 3273 | + | 0.458601 | |
g9211 | PPL_09640 | EVKQ3GG02I325Y-5_part1 | CDS | 647206 | 6339 | - | 0.395015 | |
g9226 | PPL_09653 | EVKQ3GG02I325Y-5_part1 | CDS | 690219 | 4179 | + | 0.441015 | |
g9285 | PPL_09726 | EVKQ3GG02I325Y-5_part1 | CDS | 842882 | 228 | - | 0.394737 | |
g9286 | PPL_09727 | EVKQ3GG02I325Y-5_part1 | CDS | 843130 | 753 | - | 0.39575 | |
g9361 | PPL_09803 | EVKQ3GG02I325Y-5_part1 | CDS | 1089579 | 13872 | + | 0.481546 | |
g9383 | PPL_09832 | component of actin-based molecular motor myosin II (conventional myosin) component | EVKQ3GG02I325Y-5_part1 | CDS | 1162519 | 282 | + | 0.397163 |
g9403 | PPL_09857 | EVKQ3GG02I325Y-5_part1 | CDS | 1210354 | 909 | - | 0.326733 | |
g943 | PPL_01110 | DPPA0061d07.r1-5 | CDS | 717910 | 1554 | + | 0.425354 | |
g9440 | PPL_09899 | EVKQ3GG02I325Y-5_part1 | CDS | 1341566 | 3003 | + | 0.42291 | |
g946 | PPL_01113 | DPPA0061d07.r1-5 | CDS | 723402 | 447 | - | 0.344519 | |
g9660 | PPL_10144 | EWNM59D01C4IL7-5_part1 | CDS | 446197 | 3333 | - | 0.418542 | |
g9664 | PPL_10148 | EWNM59D01C4IL7-5_part1 | CDS | 459847 | 1323 | + | 0.446712 | |
g9793 | PPL_10300 | EWNM59D01C4IL7-5_part1 | CDS | 868368 | 1362 | - | 0.439794 | |
g9905 | PPL_10429 | EXOLTKG01B86TH-3_part2 | CDS | 29173 | 1464 | - | 0.41735 |