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2024-05-19 14:50:45

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Dictyostelium lacteum

Number of genes found: 117

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10068 DLA_11239 GLQOFTK02JL55Q CDS744417 1392 + 0.34842
g10121 DLA_11301 GLQOFTK02JL55Q CDS861962 600 - 0.32
g10131 DLA_11314 GLQOFTK02JL55Q CDS883525 1353 - 0.316334
g10184 DLA_11379 functions in nuclear protein import via a substrate-importin alpha-beta transport complex that passes though the nuclear pore complexes (NPC) contains a N-terminal importin beta binding domain (IBB domain) there is a second copy of this gene GLQOFTK02JL55Q CDS1021400 1650 + 0.330909
g10209 DLA_11406 newcontig00824_1.exp CDS21406 1950 - 0.316923
g1346 DLA_01475 F4PJNLW01B0TO9 CDS131246 558 + 0.306452
g1431 DLA_01571 F4PJNLW01B0TO9 CDS311263 1335 - 0.28764
g1493 DLA_01638 F4PJNLW01B0TO9 CDS445215 936 + 0.356838
g1564 DLA_01716 F4PJNLW01B0TO9 CDS618733 624 + 0.301282
g1640 DLA_01795 F4PJNLW01B0TO9 CDS777633 1689 - 0.316163
g1804 DLA_11505 F4PJNLW01C9MXC CDS95206 1290 - 0.306202
g188 DLA_00213 contig05409_1.exp CDS431852 564 + 0.296099
g2054 DLA_02259 F4PJNLW01DERRH CDS398942 468 - 0.260684
g2235 DLA_02469 F4PJNLW01EE5MJ CDS78419 2289 - 0.351682
g2251 DLA_02488 F4PJNLW01EE5MJ CDS109636 4569 + 0.33968
g2357 DLA_02607 F4PJNLW01EE5MJ CDS354640 645 - 0.339535
g2366 DLA_02616 F4PJNLW01EE5MJ CDS373247 591 + 0.279188
g2458 DLA_02727 F4PJNLW01EE5MJ CDS588955 3414 - 0.347393
g2481 DLA_02752 weakly similar to S. cerevisiae VPS13 involved in vacuolar protein sorting and protein-Golgi retentionF4PJNLW01EE5MJ CDS642626 11559 + 0.33541
g2488 DLA_02759 F4PJNLW01EE5MJ CDS667342 6816 + 0.359008
g2591 DLA_02874 similar to S. cerevisiae VPS13 involved in vacuolar protein sorting and protein-Golgi retentionF4PJNLW01EE5MJ CDS898216 14703 - 0.327484
g2606 DLA_02891 contains Sec23Sec24 zinc finger trunk and helical domains yeast Sec23Sec24 is a component of COPII (coat protein complex II) involved in ER to Golgi transportF4PJNLW01EE5MJ CDS943766 2277 + 0.317523
g2708 DLA_03003 endoplasmic reticulum receptor for the KDEL signal sequence of proteins resident in the endoplasmic reticulum believed to cycle between the cis side of the Golgi apparatus and the ERF4PJNLW01EE5MJ CDS1143920 663 + 0.266968
g2724 DLA_03020 component of the signal recognition particle (SRP) which ensures correct targeting of nascent secretory proteins to the endoplasmic reticulumF4PJNLW01EE5MJ CDS1181808 477 + 0.333333
g2779 DLA_03076 F4PJNLW02GJ9ZB CDS56201 2220 - 0.340991
g2824 DLA_03127 F4PJNLW02GJ9ZB CDS146833 2541 - 0.245179
g2853 DLA_03160 F4PJNLW02GJ9ZB CDS213172 4545 + 0.256106
g2871 DLA_03182 F4PJNLW02GJ9ZB CDS266560 510 + 0.235294
g2942 DLA_03260 F4PJNLW02HBBIY CDS138381 11952 + 0.347808
g3021 DLA_03347 F4PJNLW02HBBIY CDS321833 1110 + 0.341441
g3156 DLA_03498 GAOABQK02FRRQV CDS39437 1425 - 0.30386
g3207 DLA_03555 GAOABQK02FWKR3 CDS17848 1452 - 0.278926
g3316 DLA_03667 similar to syntaxin 1 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionGAOABQK02G6SYV CDS194474 921 + 0.324647
g3329 DLA_03680 GAOABQK02G6SYV CDS221699 456 - 0.29386
g3336 DLA_03689 GAOABQK02G6SYV CDS231693 1032 - 0.304264
g3395 DLA_03755 GAOABQK02G6SYV CDS363597 558 + 0.320789
g344 DLA_00386 contig05409_1.exp CDS787271 429 + 0.379953
g359 DLA_00401 contig05409_1.exp CDS830609 1770 - 0.337853
g3782 DLA_04192 GAOABQK02G7M1S CDS559788 3381 - 0.359065
g3807 DLA_04222 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasGAOABQK02G7M1S CDS617133 4275 - 0.349942
g3816 DLA_04233 GAOABQK02G7M1S CDS656435 1044 - 0.304598
g3851 DLA_04271 GAOABQK02G7M1S CDS737197 1590 + 0.267925
g4130 DLA_04578 belongs to the synaptobrevin family ortholog of human SEC22B contains a longin domain and a v-snare coiled-coil domain contains 1 predicted transmembrane domainGAOABQK02GQAQJ CDS570431 627 - 0.283892
g4157 DLA_04604 GAOABQK02GQAQJ CDS627845 1929 + 0.365993
g4267 DLA_04713 GAOABQK02GQAQJ CDS860607 1854 - 0.340345
g4555 DLA_05048 GAOABQK02H81I9 CDS262440 1518 - 0.373518
g4596 DLA_05090 GAOABQK02H81I9 CDS352560 1077 - 0.312906
g4680 DLA_05181 GAOABQK02H81I9 CDS553088 1659 + 0.335744
g4800 DLA_05313 GAOABQK02H81I9 CDS839363 3039 - 0.336624
g4830 DLA_05348 GAOABQK02HUB3S CDS11346 1809 - 0.319514
g486 DLA_00538 contig05409_1.exp CDS1115144 207 - 0.338164
g5070 DLA_05615 GAOABQK02HUB3S CDS553749 6030 - 0.315091
g5085 DLA_05630 GAOABQK02HUB3S CDS588330 2022 - 0.333828
g5285 DLA_05866 GAOABQK02HUB3S CDS1120661 2448 - 0.330474
g5598 DLA_06243 GAOABQK02HUB3S CDS1842440 417 - 0.270983
g5662 DLA_06308 GAOABQK02IBA3P CDS127226 600 + 0.343333
g572 DLA_00632 contig05409_1.exp CDS1311038 1035 - 0.296618
g5739 DLA_06401 GAOABQK02IBA3P CDS327191 3069 - 0.358749
g5952 DLA_06631 GAOABQK02IBA3P CDS824711 705 - 0.307801
g6112 DLA_06805 functions in nuclear protein import via a substrate-importin alpha-beta transport complex that passes though the nuclear pore complexes (NPC) contains a N-terminal importin beta binding domain (IBB domain)GAOABQK02IO52T CDS49054 1587 + 0.360428
g632 DLA_00700 F4PJNLW01A00V1 CDS1619 1938 + 0.31063
g6433 DLA_07159 GAOABQK02JBK0O CDS45121 2970 - 0.306734
g6436 DLA_07162 GAOABQK02JBK0O CDS55174 2730 + 0.323077
g6467 DLA_07196 GAOABQK02JBK0O CDS131417 2556 + 0.321205
g6552 DLA_07297 GAOABQK02JOCCH CDS107432 1428 - 0.338235
g6599 DLA_07351 GAOABQK02JOCCH CDS228160 1170 - 0.315385
g6607 DLA_07358 GAOABQK02JOCCH CDS240004 12681 - 0.328365
g6614 DLA_07365 GAOABQK02JOCCH CDS270577 426 - 0.284038
g6686 DLA_07446 GAOABQK02JOCCH CDS428514 2859 - 0.317943
g6710 DLA_07472 GAOABQK02JOCCH CDS467845 2673 - 0.329592
g6711 DLA_07474 GAOABQK02JOCCH CDS471109 7059 - 0.374982
g6720 DLA_07485 similar to syntaxin 1 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionGAOABQK02JOCCH CDS494830 1011 - 0.318497
g6777 DLA_07549 GAOABQK02JOCCH CDS627098 894 - 0.332215
g6937 DLA_04686 GLQOFTK02FH5TG CDS112858 411 - 0.29927
g6969 DLA_07767 GLQOFTK02FH5TG CDS179062 2796 - 0.363019
g6985 DLA_07786 GLQOFTK02FH5TG CDS212046 747 + 0.298527
g73 DLA_00084 contig05409_1.exp CDS173780 2514 + 0.356404
g7346 DLA_08210 similar to syntaxin 1 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionGLQOFTK02FH5TG CDS1043861 1017 + 0.281219
g7430 DLA_08309 GLQOFTK02FH5TG CDS1244453 2094 - 0.330946
g7470 DLA_08357 GLQOFTK02FH5TG CDS1338085 3267 - 0.329966
g7475 DLA_08365 GLQOFTK02FH5TG CDS1349218 11601 - 0.325403
g7486 DLA_08378 GLQOFTK02FH5TG CDS1383522 3045 + 0.314286
g7539 DLA_08433 there is a second copy of this gene GLQOFTK02FH5TG CDS1491296 2943 + 0.321441
g7566 DLA_08462 GLQOFTK02G2F2O CDS8848 1590 - 0.31195
g7576 DLA_08474 GLQOFTK02G2F2O CDS31480 675 - 0.371852
g7724 DLA_08642 GLQOFTK02G2F2O CDS383694 4512 - 0.359043
g7747 DLA_08662 conserved protein mainly among fungi and plantsGLQOFTK02G2F2O CDS436087 2898 + 0.333333
g7934 DLA_08869 GLQOFTK02G2F2O CDS837751 234 + 0.25641
g7936 DLA_08871 GLQOFTK02G2F2O CDS840428 2337 + 0.286264
g8143 DLA_09100 GLQOFTK02G2F2O CDS1346133 1419 + 0.384778
g8197 DLA_09154 GLQOFTK02G2F2O CDS1451518 3885 - 0.351351
g8416 DLA_09385 GLQOFTK02G2F2O CDS1890456 453 + 0.335541
g8477 DLA_09450 SNARE protein interacts with AP180 (clmA) which retrieves Vamp7B from the contractile vacuoleGLQOFTK02G2F2O CDS2028516 690 + 0.291304
g8508 DLA_09484 GLQOFTK02GHM7A CDS38320 2019 + 0.301139
g852 DLA_00932 F4PJNLW01A00V1 CDS470736 10092 + 0.339279
g8531 DLA_09510 GLQOFTK02GHM7A CDS98002 2253 + 0.377275
g8593 DLA_09585 GLQOFTK02GHM7A CDS246755 4185 + 0.314934
g8608 DLA_09601 GLQOFTK02GHM7A CDS279919 3174 - 0.371456
g891 DLA_00983 F4PJNLW01A00V1 CDS569380 1380 - 0.301449
g9041 DLA_10062 GLQOFTK02GQ36N CDS387355 1842 + 0.290988
g9098 DLA_10129 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasGLQOFTK02GQ36N CDS538065 4770 - 0.341719
g9158 DLA_10199 GLQOFTK02GUKFG CDS11171 471 - 0.314225
g9210 DLA_10261 GLQOFTK02GUKFG CDS129499 4644 + 0.343239
g9236 DLA_10289 GLQOFTK02GUKFG CDS189555 1299 + 0.326405
g9240 DLA_10294 GLQOFTK02GUKFG CDS198640 1005 + 0.321393
g9259 DLA_10316 GLQOFTK02GUKFG CDS240693 10326 + 0.328879
g9262 DLA_10320 GLQOFTK02GUKFG CDS258563 918 - 0.262527
g9270 DLA_10328 GLQOFTK02GUKFG CDS292343 2208 - 0.347373
g9339 DLA_10412 GLQOFTK02GUKFG CDS436075 3642 + 0.354201
g9445 DLA_10523 GLQOFTK02IIOHN CDS85920 4386 + 0.332421
g9499 DLA_10589 similar to S. cerevisiae VPS13 involved in vacuolar protein sorting and protein-Golgi retention in D. discoideum involved in early development and tip formationGLQOFTK02IJPNF CDS37254 10056 - 0.289081
g963 DLA_01066 F4PJNLW01A00V1 CDS736130 7947 - 0.317227
g9819 DLA_10960 GLQOFTK02JL55Q CDS195158 1359 + 0.309051
g9834 DLA_10974 GLQOFTK02JL55Q CDS223375 3783 + 0.317209
g9932 DLA_11079 GLQOFTK02JL55Q CDS449060 2265 + 0.335099
g9983 DLA_11136 similar to syntaxin 16 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionGLQOFTK02JL55Q CDS557966 924 - 0.311688
g9999 DLA_11844 belongs to the drugmetabolite transporter superfamily similar to human SLC35D1 (UDP-glucuronic acidUDP-N-acetylgalactosamine transporter) and S. cerevisiae VRG4 (GDP-mannose transporter 1) contains 8 putative transmembrane domainsGLQOFTK02JL55Q CDS591072 942 - 0.321656