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2024-05-19 17:32:33

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Polysphondylium pallidum, PN500

Number of genes found: 118

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10019 PPL_10545 EXOLTKG01B86TH-3_part2 CDS361931 4890 - 0.358896
g1013 PPL_01176 DPPA0061d07.r1-5 CDS895531 1098 - 0.367942
g10163 PPL_10694 similar to syntaxin 16 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionEXOLTKG01B86TH-3_part2 CDS810275 873 - 0.342497
g10187 PPL_10723 conserved protein mainly among fungi and plantsEXOLTKG01B86TH-3_part2 CDS914488 2772 - 0.388889
g10247 PPL_10793 EXOLTKG01B86TH-3y_part1 CDS163217 1197 + 0.35589
g10303 PPL_10857 EXOLTKG01B86TH-3y_part1 CDS346255 2988 - 0.380522
g10437 PPL_10993 EXOLTKG02GJRTE-5 CDS115626 1389 + 0.408927
g10455 PPL_11021 EXOLTKG02GJRTE-5 CDS186008 1197 + 0.380117
g10532 PPL_11114 EXOLTKG02GJRTE-5 CDS386252 1194 + 0.39196
g10643 PPL_11229 PN500-F-W-a08d11.p658-5_part2 CDS213021 7863 + 0.389419
g10699 PPL_11292 PN500-F-W-a08d11.p658-5_part2 CDS376552 2154 - 0.416435
g10700 PPL_11294 involved in the unconventional secretory pathway of acbA the precurser of SDF-2 (spore differentiation factor 2) ortholog of the mammalian golgi reassembly stacking protein 2 (golgi reassembly-stacking protein of 55 kDa)PN500-F-W-a08d11.p658-5_part2 CDS380422 1053 - 0.362773
g1080 PPL_01253 DPPA0061d07.r1-5 CDS1090897 438 + 0.312785
g1089 PPL_01263 DPPA0061d07.r1-5 CDS1117732 9486 - 0.364537
g11007 PPL_11754 PN500-G-d-72b01.r1-5 CDS40005 2631 + 0.405169
g11047 PPL_11799 PN500-G-d-72b01.r1-5 CDS173824 4362 + 0.392481
g11214 PPL_11968 PN500-G-d-72b01.r1-5 CDS631746 765 + 0.513726
g11237 PPL_11992 PN500-G-d-72b01.r1-5 CDS706934 390 + 0.366667
g1145 PPL_01333 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasDPPA0061d07.r1-5 CDS1285022 4272 - 0.422285
g1220 PPL_01427 functions in nuclear protein import via a substrate-importin alpha-beta transport complex that passes though the nuclear pore complexes (NPC) contains a N-terminal importin beta binding domain (IBB domain)DPPA0090b03.f1-3_x_part2 CDS92480 1521 - 0.450362
g1364 PPL_01575 DPPA0090b03.f1-3_x_part3 CDS136946 2520 + 0.385714
g1528 PPL_01758 DPPA0090b03.f1-3_x_part3 CDS606734 3174 - 0.41966
g1546 PPL_01781 putative ortholog of mammalian sorting nexin and S. cerevisiae VPS5 a subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde transportDPPA0090b03.f1-3_x_part3 CDS663244 1596 - 0.452381
g1736 PPL_01973 similar to S. cerevisiae VPS13 involved in vacuolar protein sorting and protein-Golgi retention in D. discoideum involved in early development and tip formationDPPA0090b03.f1-3_x_part3 CDS1173296 10497 + 0.391445
g1847 PPL_02097 DPPA0090b03.f1-3_x_part3 CDS1493464 4521 - 0.397921
g1923 PPL_02179 DPPA0090b03.f1-3_x_part3 CDS1756124 1422 + 0.459916
g1960 PPL_02219 DPPA0090b03.f1-3_x_part3 CDS1861223 405 + 0.34321
g1973 PPL_02232 DPPA0090b03.f1-3_x_part3 CDS1897024 645 - 0.420155
g1985 PPL_02243 DPPA0090b03.f1-3_x_part3 CDS1927047 3198 - 0.449343
g2499 PPL_02816 DPPA0090b03.f1-3_y_part1 CDS625558 210 + 0.37619
g2513 PPL_02832 DPPA0090b03.f1-3_y_part1 CDS665383 1809 - 0.389165
g2537 PPL_12961 DPPA0090b03.f1-3_y_part1 CDS720614 1902 + 0.384858
g2569 PPL_02889 DPPA0090b03.f1-3_y_part1 CDS792190 1977 - 0.418311
g2597 PPL_02927 DPPA0090b03.f1-3_y_part1 CDS867633 2898 + 0.352657
g262 PPL_00370 DPPA0004F08.r1-5_part2 CDS756907 1815 + 0.400551
g2712 PPL_03056 DPPA0090b03.f1-3_y_part1 CDS1208675 3255 + 0.369892
g2840 PPL_03195 DPPA0090b03.f1-3_y_part1 CDS1561591 2265 + 0.48521
g2915 PPL_13006 DPPA0090b03.f1-3_y_part1 CDS1761078 1470 - 0.395918
g2916 PPL_13007 DPPA0090b03.f1-3_y_part1 CDS1762796 990 - 0.352525
g3100 PPL_03479 DPPA0090b03.f1-3_y_part1 CDS2265988 1167 + 0.384747
g336 PPL_00448 DPPA0004F08.r1-5_part2 CDS966105 5640 + 0.382979
g3363 PPL_03809 DPPB0337b12.r1-5 CDS407514 1302 + 0.314132
g3422 PPL_13060 DPPB0337b12.r1-5 CDS556558 606 - 0.457096
g354 PPL_00469 DPPA0004F08.r1-5_part2 CDS1026696 1083 - 0.364728
g3874 PPL_04376 weakly similar to S. cerevisiae VPS13 involved in vacuolar protein sorting and protein-Golgi retentionDPPB0360e11.f1-5 CDS534091 11271 + 0.418242
g4036 PPL_04555 DPPB0360e11.f1-5 CDS1024121 2805 - 0.357932
g4037 PPL_04557 component of the signal recognition particle (SRP) which ensures correct targeting of nascent secretory proteins to the endoplasmic reticulumDPPB0360e11.f1-5 CDS1027565 486 + 0.335391
g444 PPL_00570 DPPA0004F08.r1-5_part2 CDS1291308 4569 + 0.408186
g4451 PPL_05043 E0KFERV02EE9X2-3_part2 CDS294882 4575 + 0.337486
g4555 PPL_05160 E3JQK7F01CUWUC-3_part1 CDS274732 2304 + 0.39974
g4689 PPL_05310 E3JQK7F01EFZL8-5 CDS152553 3174 - 0.431002
g4717 PPL_05342 E3JQK7F01EFZL8-5 CDS252782 663 - 0.333333
g4751 PPL_05382 E3JQK7F01EFZL8-5 CDS333513 3888 + 0.378344
g483 PPL_00616 DPPA0004F08.r1-5_part2 CDS1415720 1377 - 0.318809
g5084 PPL_05733 similar to syntaxin 1 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionE3JQK7F01EFZL8-5 CDS1255401 999 - 0.38038
g5283 PPL_05936 E3JQK7F02G10GF-5 CDS369370 2643 + 0.430193
g5324 PPL_05973 component of the signal recognition particle (SRP) which ensures correct targeting of nascent secretory proteins to the endoplasmic reticulumE3JQK7F02G10GF-5 CDS467402 1515 - 0.4
g5336 PPL_05988 E3JQK7F02G10GF-5 CDS494787 13017 + 0.429515
g5337 PPL_05990 E3JQK7F02G10GF-5 CDS508064 2421 + 0.410574
g5403 PPL_06061 E3JQK7F02G10GF-5 CDS688975 2742 + 0.392779
g547 PPL_00680 DPPA0004F08.r1-5_part3 CDS42246 2229 + 0.41633
g548 PPL_00681 DPPA0004F08.r1-5_part3 CDS45400 5994 + 0.385385
g6020 PPL_06743 E3JQK7F02HW0LE-5_part2 CDS381256 999 - 0.337337
g612 PPL_00744 DPPA0004F08.r1-5_part3 CDS217250 3255 + 0.399693
g6143 PPL_06867 E3JQK7F02HW0LE-5_part2 CDS699716 585 + 0.355556
g624 PPL_00757 DPPA0004F08.r1-5_part3 CDS250439 2094 + 0.459408
g6256 PPL_06991 E3JQK7F02HW0LE-5_part2 CDS1011350 450 + 0.353333
g6282 PPL_07018 E3JQK7F02HW0LE-5_part2 CDS1092074 11724 + 0.408905
g6507 PPL_13337 E3JQK7F02HW0LE-5_part2 CDS1741142 309 - 0.423948
g6556 PPL_07329 E3JQK7F02HW0LE-5_part2 CDS1895638 4248 + 0.374294
g6569 PPL_07344 E3JQK7F02HW0LE-5_part2 CDS1934009 2601 - 0.332949
g6577 PPL_07352 subunit of the exocyst complex which targets secretory vesicles to active sites of exocytosisE3JQK7F02HW0LE-5_part2 CDS1955998 2202 + 0.391462
g6590 PPL_07367 similar to syntaxin 16 a subfamily of the SNARE family (Soluble NSF Attachment Protein REceptor) involved in vesicle fusionEVG8W8Q01C9YYY-5_part1 CDS16396 906 + 0.343267
g6691 PPL_07490 EVG8W8Q01C9YYY-5_part2 CDS101780 3150 + 0.439683
g6714 PPL_07515 EVG8W8Q01C9YYY-5_part2 CDS168200 12471 + 0.402614
g6743 PPL_07547 EVG8W8Q01EEF2G-5 CDS48390 1032 - 0.357558
g6938 PPL_07756 EVG8W8Q02J3HU6-3_part1 CDS265156 8928 + 0.429435
g6939 PPL_13363 EVG8W8Q02J3HU6-3_part1 CDS274408 672 + 0.470238
g6971 PPL_07795 functions in nuclear protein import via a substrate-importin alpha-beta transport complex that passes though the nuclear pore complexes (NPC) contains a N-terminal importin beta binding domain (IBB domain) there is a second copy of this gene EVG8W8Q02J3HU6-3_part1 CDS367438 1617 - 0.435374
g730 PPL_00879 DPPA0061d07.r1-5 CDS86933 2058 + 0.498056
g7397 PPL_08255 EVG8W8Q02J3HU6-3_part3 CDS530148 1098 + 0.343352
g7497 PPL_08374 EVG8W8Q02J3HU6-3_part3 CDS798875 2067 + 0.396226
g7653 PPL_08555 EVKQ3GG01CS5PZ-3_part1 CDS25655 630 + 0.374603
g7740 PPL_08645 EVKQ3GG01CS5PZ-3_part1 CDS270006 5253 + 0.498572
g7747 PPL_08653 EVKQ3GG01CS5PZ-3_part1 CDS290822 3141 + 0.440942
g7765 PPL_08679 EVKQ3GG01CS5PZ-3_part1 CDS346735 2562 - 0.466432
g7854 PPL_08776 EVKQ3GG01CS5PZ-3_part1 CDS599212 2742 + 0.394602
g7872 PPL_08797 EVKQ3GG01CS5PZ-3_part1 CDS648048 2205 - 0.431746
g788 PPL_00949 DPPA0061d07.r1-5 CDS284858 759 + 0.382082
g7925 PPL_08856 EVKQ3GG01CS5PZ-3_part1 CDS834837 17361 - 0.415183
g7975 PPL_08913 EVKQ3GG01CS5PZ-3_part1 CDS986211 2535 + 0.347535
g8005 PPL_08948 atypical protein kinase belongs to the PIKK family of protein kinases similar to transformationtranscription domain-associated protein (TRRAP)EVKQ3GG01CS5PZ-3_part1 CDS1078944 12966 + 0.429585
g8080 PPL_09023 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasEVKQ3GG01CS5PZ-3_part1 CDS1280112 5025 + 0.416119
g8342 PPL_09302 EVKQ3GG01CS5PZ-3_part2 CDS153770 333 - 0.405405
g8432 PPL_09407 EVKQ3GG01DB4K7-5 CDS397 7002 + 0.458012
g8520 PPL_12138 EVKQ3GG01DOIJB_part1 CDS276503 1353 + 0.45898
g8532 PPL_12151 EVKQ3GG01DOIJB_part1 CDS307559 2151 + 0.41934
g8540 PPL_12160 EVKQ3GG01DOIJB_part1 CDS329340 3003 - 0.435231
g8544 PPL_12167 EVKQ3GG01DOIJB_part1 CDS351088 4431 + 0.425863
g8548 PPL_12172 EVKQ3GG01DOIJB_part1 CDS366638 1911 + 0.430665
g8609 PPL_12238 EVKQ3GG01DOIJB_part1 CDS527136 4446 - 0.421502
g8701 PPL_12338 EVKQ3GG01DOIJB_part1 CDS796585 3399 - 0.414828
g9028 PPL_09450 EVKQ3GG02I325Y-5_part1 CDS120492 1365 + 0.339194
g9348 PPL_09793 EVKQ3GG02I325Y-5_part1 CDS1025817 14310 + 0.361356
g9355 PPL_09797 EVKQ3GG02I325Y-5_part1 CDS1058152 13197 + 0.350004
g9384 PPL_09833 EVKQ3GG02I325Y-5_part1 CDS1164152 2010 + 0.390547
g9429 PPL_09886 EVKQ3GG02I325Y-5_part1 CDS1304371 2310 - 0.394805
g9436 PPL_09893 EVKQ3GG02I325Y-5_part1 CDS1323159 2460 - 0.408943
g9516 PPL_09989 EWNM59D01C4IL7-5_part1 CDS56570 651 + 0.344086
g955 PPL_01120 homolog of H. sapiens TNPO12 and S. cervisiae KAP104 (karyopherin 104) involved in nuclear protein importDPPA0061d07.r1-5 CDS743453 2706 - 0.410569
g9593 PPL_10069 EWNM59D01C4IL7-5_part1 CDS257541 2496 - 0.435497
g9626 PPL_10108 EWNM59D01C4IL7-5_part1 CDS354418 1527 - 0.391618
g9757 PPL_10258 EWNM59D01C4IL7-5_part1 CDS754110 3837 - 0.455304
g9781 PPL_10288 EWNM59D01C4IL7-5_part1 CDS826359 10395 - 0.389226
g981 PPL_12763 DPPA0061d07.r1-5 CDS809648 5637 + 0.361717
g9824 PPL_10340 EWNM59D01C4IL7-5_part1 CDS959812 3849 + 0.376202
g9826 PPL_10342 EWNM59D01C4IL7-5_part1 CDS964362 3678 + 0.383904
g9994 PPL_10523 EXOLTKG01B86TH-3_part2 CDS279739 2055 + 0.431144