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2024-05-19 16:48:42

Gene list

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COG category: Function unknown
Organism: Polysphondylium pallidum, PN500

Number of genes found: 157

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10088 PPL_10619 EXOLTKG01B86TH-3_part2 CDS577407 1464 - 0.385929
g10160 PPL_10690 EXOLTKG01B86TH-3_part2 CDS800458 2325 - 0.353548
g10200 PPL_10741 EXOLTKG01B86TH-3y_part1 CDS10233 918 + 0.347495
g10237 PPL_10779 EXOLTKG01B86TH-3y_part1 CDS126379 3234 - 0.413111
g10457 PPL_11023 EXOLTKG02GJRTE-5 CDS191610 738 - 0.426829
g10463 PPL_11031 EXOLTKG02GJRTE-5 CDS204915 459 + 0.400871
g1048 PPL_01218 DPPA0061d07.r1-5 CDS995193 1788 + 0.384228
g1052 PPL_01224 DPPA0061d07.r1-5 CDS1010166 1305 - 0.321073
g10626 PPL_11210 PN500-F-W-a08d11.p658-5_part2 CDS168038 951 + 0.407992
g10658 PPL_11248 PN500-F-W-a08d11.p658-5_part2 CDS257056 531 - 0.384181
g10682 PPL_11274 PN500-F-W-a08d11.p658-5_part2 CDS323482 537 - 0.430168
g10874 PPL_11476 PN500-F-W-a08d11.p658-5_part2 CDS885732 849 - 0.3404
g10945 PPL_11690 PN500-G-d-37g01.f1-5 CDS21362 6342 + 0.365184
g11002 PPL_11748 PN500-G-d-72b01.r1-5 CDS26396 2148 + 0.396648
g11130 PPL_11884 PN500-G-d-72b01.r1-5 CDS415355 3795 + 0.422134
g11143 PPL_11900 PN500-G-d-72b01.r1-5 CDS457206 1461 - 0.379877
g11171 PPL_11930 PN500-G-d-72b01.r1-5 CDS528937 888 - 0.356982
g1119 PPL_01299 DPPA0061d07.r1-5 CDS1208923 2421 - 0.432879
g11240 PPL_11995 PN500-G-d-72b01.r1-5 CDS711870 894 - 0.401566
g11249 PPL_12006 PN500-G-d-72b01.r1-5 CDS739014 1419 + 0.410148
g11268 PPL_12027 PN500-G-d-72b01.r1-5 CDS782437 303 - 0.415842
g11327 PPL_11594 PN500-G-d-188d09.r1-5 CDS136542 468 + 0.32906
g1229 PPL_01437 DPPA0090b03.f1-3_x_part2 CDS119251 1500 - 0.402667
g123 PPL_00220 DPPA0004F08.r1-5_part2 CDS348440 1737 - 0.353483
g1268 PPL_01478 DPPA0090b03.f1-3_x_part2 CDS250162 6513 + 0.401505
g1283 PPL_01493 DPPA0090b03.f1-3_x_part2 CDS295057 2265 - 0.416336
g1371 PPL_01582 DPPA0090b03.f1-3_x_part3 CDS152411 1860 - 0.323118
g1474 PPL_01699 DPPA0090b03.f1-3_x_part3 CDS449201 2643 - 0.413167
g1681 PPL_12856 DPPA0090b03.f1-3_x_part3 CDS1009973 1518 - 0.407115
g1718 PPL_01955 DPPA0090b03.f1-3_x_part3 CDS1109103 687 + 0.387191
g1813 PPL_02055 DPPA0090b03.f1-3_x_part3 CDS1399601 2580 + 0.312016
g1870 PPL_02122 DPPA0090b03.f1-3_x_part3 CDS1578786 3921 - 0.321602
g1917 PPL_02172 putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active form DPPA0090b03.f1-3_x_part3 CDS1734330 5526 - 0.435215
g1940 PPL_02199 DPPA0090b03.f1-3_x_part3 CDS1804682 1398 - 0.377682
g1951 PPL_02211 DPPA0090b03.f1-3_x_part3 CDS1838678 1497 - 0.384102
g1982 PPL_02240 DPPA0090b03.f1-3_x_part3 CDS1920334 861 + 0.412311
g2061 PPL_02327 DPPA0090b03.f1-3_x_part3 CDS2164456 750 - 0.398667
g213 PPL_00317 DPPA0004F08.r1-5_part2 CDS602563 1089 - 0.3618
g2235 PPL_12925 DPPA0090b03.f1-3_x_part4 CDS215506 816 - 0.366422
g2242 PPL_02540 DPPA0090b03.f1-3_x_part4 CDS230772 582 - 0.443299
g2287 PPL_02594 DPPA0090b03.f1-3_y_part1 CDS58541 1560 + 0.448718
g2343 PPL_02651 DPPA0090b03.f1-3_y_part1 CDS213619 396 + 0.406566
g235 PPL_00344 DPPA0004F08.r1-5_part2 CDS679195 1080 + 0.439815
g2372 PPL_02678 DPPA0090b03.f1-3_y_part1 CDS274324 585 + 0.347009
g2373 PPL_02679 DPPA0090b03.f1-3_y_part1 CDS275198 1059 - 0.371105
g243 PPL_00354 DPPA0004F08.r1-5_part2 CDS700011 564 + 0.407801
g2463 PPL_02776 DPPA0090b03.f1-3_y_part1 CDS518151 1647 - 0.452338
g2487 PPL_02805 DPPA0090b03.f1-3_y_part1 CDS591186 5910 - 0.441794
g2492 PPL_02810 DPPA0090b03.f1-3_y_part1 CDS608081 777 - 0.414414
g2576 PPL_02898 conserved from bacteria to plants to alveolata contains 10 predicted transmembrane domainsDPPA0090b03.f1-3_y_part1 CDS816562 693 + 0.379509
g2683 PPL_03021 DPPA0090b03.f1-3_y_part1 CDS1115896 525 - 0.361905
g2745 PPL_03091 DPPA0090b03.f1-3_y_part1 CDS1293035 471 - 0.441614
g2821 PPL_03174 DPPA0090b03.f1-3_y_part1 CDS1514640 582 + 0.331615
g2874 PPL_03229 DPPA0090b03.f1-3_y_part1 CDS1654747 810 + 0.388889
g307 PPL_00420 DPPA0004F08.r1-5_part2 CDS888988 288 + 0.423611
g3191 PPL_03615 one of many putative Dictyostelium potassium channels contains 3 pentapeptide repeatsDPPA0255d09.f1-5 CDS196248 1446 + 0.35823
g3372 PPL_13058 DPPB0337b12.r1-5 CDS434261 1332 + 0.406156
g3535 PPL_13079 DPPB0337b12.r1-5 CDS879714 1896 - 0.43038
g3543 PPL_04007 DPPB0337b12.r1-5 CDS898493 1938 - 0.363261
g355 PPL_00470 DPPA0004F08.r1-5_part2 CDS1029113 1908 + 0.364256
g3626 PPL_04096 DPPB0337b12.r1-5 CDS1127725 1008 + 0.355159
g3668 PPL_04143 DPPB0337b12.r1-5 CDS1227459 2655 - 0.477213
g369 PPL_00483 DPPA0004F08.r1-5_part2 CDS1067800 2238 + 0.410188
g3761 PPL_04248 DPPB0360e11.f1-5 CDS170209 1026 + 0.352827
g3789 PPL_04280 DPPB0360e11.f1-5 CDS257527 2733 - 0.445298
g3804 PPL_04298 DPPB0360e11.f1-5 CDS321029 1059 - 0.320113
g3859 PPL_04361 ortholog of human APOA1BP S. pombe mug182DPPB0360e11.f1-5 CDS486680 1071 - 0.351074
g393 PPL_00508 DPPA0004F08.r1-5_part2 CDS1145180 2454 + 0.426243
g3978 PPL_04493 DPPB0360e11.f1-5 CDS848847 402 - 0.340796
g3988 PPL_04505 DPPB0360e11.f1-5 CDS890475 1380 - 0.387681
g3992 PPL_04509 DPPB0360e11.f1-5 CDS902394 840 - 0.421429
g4067 PPL_04587 E0KFERV02EE9X2-3_part1 CDS69555 975 + 0.442051
g41 PPL_12651 DPPA0004F08.r1-5_part2 CDS112647 684 + 0.372807
g4242 PPL_04794 E0KFERV02EE9X2-3_part1 CDS612871 1308 - 0.394495
g4448 PPL_05040 E0KFERV02EE9X2-3_part2 CDS284450 1158 + 0.357513
g4471 PPL_13167 E3JQK7F01CUWUC-3_part1 CDS49586 588 + 0.392857
g4716 PPL_05341 E3JQK7F01EFZL8-5 CDS251221 1260 + 0.353968
g4835 PPL_13191 E3JQK7F01EFZL8-5 CDS591786 816 - 0.324755
g4903 PPL_05545 E3JQK7F01EFZL8-5 CDS774521 330 + 0.390909
g4927 PPL_05571 E3JQK7F01EFZL8-5 CDS831930 2508 + 0.394737
g4935 PPL_05580 E3JQK7F01EFZL8-5 CDS847614 1005 + 0.343284
g5012 PPL_05654 E3JQK7F01EFZL8-5 CDS1066396 405 + 0.377778
g5120 PPL_05766 E3JQK7F01EFZL8-5 CDS1348943 981 - 0.275229
g5300 PPL_13231 E3JQK7F02G10GF-5 CDS408316 846 - 0.35461
g5427 PPL_06090 E3JQK7F02G10GF-5 CDS756791 2283 + 0.391152
g5429 PPL_06093 putative ortholog of H. sapiens SHOC2 also known as Ras-binding protein Sur-8E3JQK7F02G10GF-5 CDS764665 1539 + 0.443795
g5536 PPL_06201 E3JQK7F02GERJ7-5 CDS242492 1761 - 0.358319
g5556 PPL_06221 E3JQK7F02HEVRT-5 CDS36953 561 + 0.299465
g5622 PPL_06288 E3JQK7F02HEVRT-5 CDS225741 453 + 0.423841
g5624 PPL_06290 E3JQK7F02HEVRT-5 CDS229401 1518 - 0.341238
g5628 PPL_13261 E3JQK7F02HEVRT-5 CDS246158 819 - 0.316239
g6003 PPL_06724 E3JQK7F02HW0LE-5_part2 CDS330464 1308 + 0.40367
g6057 PPL_06781 E3JQK7F02HW0LE-5_part2 CDS470010 669 - 0.363229
g6313 PPL_07052 E3JQK7F02HW0LE-5_part2 CDS1195835 918 - 0.335512
g6422 PPL_07184 E3JQK7F02HW0LE-5_part2 CDS1528928 1374 - 0.414119
g6449 PPL_07213 E3JQK7F02HW0LE-5_part2 CDS1599430 645 + 0.44031
g6481 PPL_07246 conserved protein similar to S. cerevisiae EMI5 a mitochondrial protein which is involved in meiotic-specific transcription and sporulationE3JQK7F02HW0LE-5_part2 CDS1673758 414 + 0.31401
g6543 PPL_07313 E3JQK7F02HW0LE-5_part2 CDS1851980 1518 + 0.434124
g6744 PPL_07548 EVG8W8Q01EEF2G-5 CDS52610 1443 + 0.367983
g6768 PPL_07574 EVG8W8Q01EEF2G-5 CDS126240 1953 + 0.369688
g6786 PPL_07596 EVG8W8Q01EEF2G-5 CDS174381 1428 + 0.433473
g6914 PPL_07734 EVG8W8Q02J3HU6-3_part1 CDS196592 3759 - 0.439213
g6950 PPL_07769 EVG8W8Q02J3HU6-3_part1 CDS301155 804 - 0.383085
g7040 PPL_07858 EVG8W8Q02J3HU6-3_part1 CDS554065 1854 + 0.421251
g707 PPL_00853 DPPA0061d07.r1-5 CDS14454 8154 + 0.36522
g7156 PPL_07974 EVG8W8Q02J3HU6-3_part2 CDS215920 4686 - 0.409304
g7263 PPL_08103 ortholog of S. cerevisiae PUS7 which catalyzes pseudouridylation at position 35 in U2 snRNA position 50 in 5S rRNA position 13 in cytoplasmic tRNAs and position 35 in pre-tRNA(Tyr) conserved in archaea vertebrates and some bacteriaEVG8W8Q02J3HU6-3_part3 CDS151851 3888 - 0.35108
g7272 PPL_08113 EVG8W8Q02J3HU6-3_part3 CDS178598 630 + 0.431746
g7284 PPL_08131 ortholog of the conserved COQ9 a protein which in S. cerevisiae is required for ubiquinone (coenzyme Q) biosynthesisEVG8W8Q02J3HU6-3_part3 CDS223115 612 - 0.344771
g7335 PPL_08184 EVG8W8Q02J3HU6-3_part3 CDS359868 639 - 0.372457
g7428 PPL_08295 EVG8W8Q02J3HU6-3_part3 CDS621263 447 + 0.353468
g7502 PPL_08377 EVG8W8Q02J3HU6-3_part3 CDS812675 825 + 0.406061
g7516 PPL_08396 EVG8W8Q02J3HU6-3_part3 CDS850760 714 - 0.338936
g7545 PPL_08431 EVG8W8Q02J3HU6-3_part3 CDS946463 423 - 0.361702
g7673 PPL_08576 EVKQ3GG01CS5PZ-3_part1 CDS66846 678 - 0.371681
g7715 PPL_13422 EVKQ3GG01CS5PZ-3_part1 CDS188618 798 - 0.377193
g7781 PPL_08696 EVKQ3GG01CS5PZ-3_part1 CDS382757 1125 + 0.353778
g7818 PPL_08738 EVKQ3GG01CS5PZ-3_part1 CDS487382 927 - 0.420712
g7871 PPL_08796 EVKQ3GG01CS5PZ-3_part1 CDS645779 1398 - 0.442775
g7875 PPL_08800 EVKQ3GG01CS5PZ-3_part1 CDS657889 1053 - 0.425451
g7891 PPL_08819 EVKQ3GG01CS5PZ-3_part1 CDS713686 1044 - 0.341954
g7907 PPL_08836 EVKQ3GG01CS5PZ-3_part1 CDS753303 1590 - 0.374214
g7919 PPL_08851 EVKQ3GG01CS5PZ-3_part1 CDS792690 2088 - 0.462165
g8105 PPL_09047 EVKQ3GG01CS5PZ-3_part1 CDS1345572 951 + 0.405889
g8192 PPL_09135 EVKQ3GG01CS5PZ-3_part1 CDS1570449 264 - 0.375
g8289 PPL_09247 EVKQ3GG01CS5PZ-3_part1 CDS1875120 1599 - 0.322076
g8305 PPL_09267 ortholog of human NIF3L1 belongs to the UPF0135 (NIF3) familyEVKQ3GG01CS5PZ-3_part2 CDS40507 1056 + 0.411932
g8399 PPL_09370 EVKQ3GG01CS5PZ-3_part2 CDS302148 3243 - 0.438175
g8509 PPL_12122 EVKQ3GG01DOIJB_part1 CDS235887 429 + 0.354312
g8578 PPL_12206 EVKQ3GG01DOIJB_part1 CDS452053 963 + 0.379024
g8589 PPL_12219 ortholog of S. cerevisiae ESF1 a nucleolar protein involved in pre-rRNA processingEVKQ3GG01DOIJB_part1 CDS476489 2490 + 0.3751
g8595 PPL_12225 EVKQ3GG01DOIJB_part1 CDS496628 1119 - 0.4084
g8601 PPL_13485 EVKQ3GG01DOIJB_part1 CDS510018 1791 + 0.381351
g8643 PPL_12276 EVKQ3GG01DOIJB_part1 CDS618762 333 - 0.375375
g8859 PPL_12507 EVKQ3GG01DOIJB_part2 CDS400802 1926 - 0.385254
g8863 PPL_13499 EVKQ3GG01DOIJB_part2 CDS415895 879 - 0.469852
g9010 PPL_13509 subunit 2 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevisEVKQ3GG02I325Y-5_part1 CDS68827 732 - 0.351093
g9026 PPL_09448 EVKQ3GG02I325Y-5_part1 CDS116629 744 + 0.403226
g9027 PPL_09449 EVKQ3GG02I325Y-5_part1 CDS117730 450 - 0.362222
g9132 PPL_09562 EVKQ3GG02I325Y-5_part1 CDS432412 2229 - 0.402423
g9167 PPL_09597 EVKQ3GG02I325Y-5_part1 CDS528316 855 + 0.381287
g9204 PPL_13530 EVKQ3GG02I325Y-5_part1 CDS630259 1077 + 0.407614
g9222 PPL_09649 EVKQ3GG02I325Y-5_part1 CDS676951 786 + 0.44402
g923 PPL_01088 DPPA0061d07.r1-5 CDS651184 1818 + 0.378988
g9312 PPL_09754 ortholog of S. cerevisiae and H. sapiens EMG1 involved in 40S ribosome biogenesisEVKQ3GG02I325Y-5_part1 CDS905474 873 - 0.367698
g9527 PPL_10001 EWNM59D01C4IL7-5_part1 CDS85964 1761 - 0.381034
g9606 PPL_10082 EWNM59D01C4IL7-5_part1 CDS293760 750 - 0.336
g9618 PPL_10099 EWNM59D01C4IL7-5_part1 CDS331406 480 + 0.391667
g9638 PPL_10120 EWNM59D01C4IL7-5_part1 CDS379934 1452 + 0.415289
g9640 PPL_10122 EWNM59D01C4IL7-5_part1 CDS385157 3303 - 0.423554
g9671 PPL_10157 EWNM59D01C4IL7-5_part1 CDS483067 1854 - 0.443366
g976 PPL_01144 DPPA0061d07.r1-5 CDS798114 834 - 0.422062
g9771 PPL_10278 widely conserved protein very similar to M. musculus Myg1 (melanocyte proliferating gene 1)EWNM59D01C4IL7-5_part1 CDS806103 894 - 0.408277
g9877 PPL_10399 EXOLTKG01B86TH-3_part1 CDS57803 2364 - 0.404399
g9916 PPL_10441 EXOLTKG01B86TH-3_part2 CDS61710 567 + 0.386243
g9927 PPL_13579 EXOLTKG01B86TH-3_part2 CDS102871 804 - 0.370647
g9984 PPL_10512 EXOLTKG01B86TH-3_part2 CDS243986 402 - 0.422886