Gene list
Applied filters:
COG category: Function unknown
Organism: Dictyostelium discoideum AX4, AX4
Number of genes found: 226
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Dictyostelium discoideum AX4, AX4 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
DDB_G0267712 | DDB_G0267712 | DDB0232428 | CDS | 675419 | 438 | + | 0.33105 | |
DDB_G0267722 | DDB_G0267722 | DDB0232428 | CDS | 699431 | 690 | - | 0.276812 | |
DDB_G0267768 | DDB_G0267768 | widely conserved protein very similar to M. musculus Myg1 (melanocyte proliferating gene 1) | DDB0232428 | CDS | 809267 | 990 | + | 0.282828 |
DDB_G0267822 | DDB_G0267822 | DDB0232428 | CDS | 920878 | 1098 | + | 0.284153 | |
DDB_G0267908 | DDB_G0267908 | DDB0232428 | CDS | 1083269 | 300 | + | 0.256667 | |
DDB_G0268110 | DDB_G0268110 | DDB0232428 | CDS | 1466318 | 1545 | - | 0.241424 | |
DDB_G0268136 | DDB_G0268136 | DDB0232428 | CDS | 1527025 | 972 | + | 0.270576 | |
DDB_G0268166 | DDB_G0268166 | similar to uncharacterized bacterial and eukaryotic proteins of the cupin_5 family also predicted to have an RmlC-like jelly roll fold | DDB0232428 | CDS | 1590745 | 540 | + | 0.261111 |
DDB_G0268586 | DDB_G0268586 | DDB0232428 | CDS | 1666540 | 1164 | - | 0.262028 | |
DDB_G0268696 | DDB_G0268696 | DDB0232428 | CDS | 1935672 | 1632 | + | 0.289216 | |
DDB_G0268796 | DDB_G0268796 | DDB0232428 | CDS | 2124707 | 693 | - | 0.249639 | |
DDB_G0269000 | DDB_G0269000 | DDB0232428 | CDS | 2111460 | 1104 | - | 0.286232 | |
DDB_G0269060 | DDB_G0269060 | DDB0232428 | CDS | 1958550 | 1767 | + | 0.238257 | |
DDB_G0269088 | DDB_G0269088 | DDB0232428 | CDS | 2134088 | 501 | - | 0.319361 | |
DDB_G0269302 | DDB_G0269302 | DDB0232428 | CDS | 2482897 | 867 | - | 0.222607 | |
DDB_G0269312 | DDB_G0269312 | ortholog of S. cerevisiae ESF1 a nucleolar protein involved in pre-rRNA processing | DDB0232428 | CDS | 2497222 | 2511 | - | 0.282358 |
DDB_G0269594 | DDB_G0269594 | DDB0232428 | CDS | 3087129 | 2715 | + | 0.335175 | |
DDB_G0269760 | DDB_G0269760 | one of many putative Dictyostelium potassium channels contains 3 pentapeptide repeats | DDB0232428 | CDS | 3510769 | 1068 | + | 0.297753 |
DDB_G0269766 | DDB_G0269766 | similar to UPF0451 family proteins contains 3 predicted transmembrane domains there is an almost identical gene | DDB0232428 | CDS | 3517400 | 363 | - | 0.30854 |
DDB_G0269890 | DDB_G0269890 | ortholog of human APOA1BP S. pombe mug182 | DDB0232428 | CDS | 3803772 | 708 | + | 0.265537 |
DDB_G0269930 | DDB_G0269930 | DDB0232428 | CDS | 3886301 | 297 | + | 0.245791 | |
DDB_G0269998 | DDB_G0269998 | DDB0232428 | CDS | 3995432 | 3243 | + | 0.211224 | |
DDB_G0270192 | DDB_G0270192 | conserved from bacteria to plants to alveolata contains 10 predicted transmembrane domains | DDB0232428 | CDS | 4389263 | 1284 | + | 0.246885 |
DDB_G0270412 | DDB_G0270412 | DDB0232428 | CDS | 4819722 | 1983 | + | 0.2824 | |
DDB_G0270942 | DDB_G0270942 | similar to UPF0451 family proteins contains 3 predicted transmembrane domains there is an almost identical gene | DDB0232428 | CDS | 3518935 | 363 | - | 0.316804 |
DDB_G0271742 | DDB_G0271742 | DDB0232429 | CDS | 910931 | 651 | - | 0.322581 | |
DDB_G0271786 | DDB_G0271786 | DDB0232429 | CDS | 712435 | 3492 | - | 0.201031 | |
DDB_G0271836 | DDB_G0271836 | DDB0232429 | CDS | 904078 | 615 | - | 0.297561 | |
DDB_G0271982 | DDB_G0271982 | DDB0232429 | CDS | 1103704 | 1890 | - | 0.284127 | |
DDB_G0272220 | DDB_G0272220 | DDB0232429 | CDS | 1693684 | 2616 | + | 0.270642 | |
DDB_G0272252 | DDB_G0272252 | DDB0232429 | CDS | 1388787 | 495 | + | 0.246465 | |
DDB_G0272322 | DDB_G0272322 | DDB0232429 | CDS | 1285359 | 963 | - | 0.318795 | |
DDB_G0272386 | DDB_G0272386 | DDB0232429 | CDS | 1415836 | 1344 | + | 0.296875 | |
DDB_G0272746 | DDB_G0272746 | DDB0232429 | CDS | 2239128 | 1140 | - | 0.220175 | |
DDB_G0272863 | DDB_G0272863 | DDB0232429 | CDS | 2069719 | 1362 | + | 0.263583 | |
DDB_G0273103 | DDB_G0273103 | there is a second copy of this gene | DDB0232429 | CDS | 2565766 | 717 | + | 0.319386 |
DDB_G0273151 | DDB_G0273151 | there is a second copy of this gene | DDB0232429 | CDS | 2523859 | 2118 | - | 0.219075 |
DDB_G0273177 | DDB_G0273177 | there is a second copy of this gene | DDB0232429 | CDS | 2526700 | 378 | - | 0.261905 |
DDB_G0273277 | DDB_G0273277 | there is a second copy of this gene | DDB0232429 | CDS | 2575884 | 1374 | - | 0.3377 |
DDB_G0273357 | DDB_G0273357 | there is a second copy of this gene | DDB0232429 | CDS | 2693104 | 1980 | - | 0.377273 |
DDB_G0273423 | DDB_G0273423 | there is a second copy of this gene | DDB0232429 | CDS | 2975860 | 1233 | - | 0.300081 |
DDB_G0273527 | DDB_G0273527 | there is a second copy of this gene | DDB0232429 | CDS | 3054694 | 1233 | + | 0.300081 |
DDB_G0273733 | DDB_G0273733 | there is a second copy of this gene | DDB0232429 | CDS | 3336611 | 1980 | + | 0.377273 |
DDB_G0273829 | DDB_G0273829 | there is a second copy of this gene | DDB0232429 | CDS | 3454255 | 1374 | + | 0.3377 |
DDB_G0273835 | DDB_G0273835 | there is a second copy of this gene | DDB0232429 | CDS | 3465226 | 717 | - | 0.319386 |
DDB_G0273871 | DDB_G0273871 | there is a second copy of this gene | DDB0232429 | CDS | 3504469 | 378 | + | 0.261905 |
DDB_G0273873 | DDB_G0273873 | there is a second copy of this gene | DDB0232429 | CDS | 3505655 | 2118 | + | 0.219075 |
DDB_G0274231 | DDB_G0274231 | DDB0232429 | CDS | 4700982 | 1656 | - | 0.236715 | |
DDB_G0274275 | DDB_G0274275 | DDB0232429 | CDS | 4012481 | 10254 | - | 0.277453 | |
DDB_G0274303 | DDB_G0274303 | DDB0232429 | CDS | 3981595 | 507 | - | 0.299803 | |
DDB_G0274327 | DDB_G0274327 | ortholog of S. cerevisiae SPN1 (ISW1) a probable transcriptional elongation factor | DDB0232429 | CDS | 3920096 | 1947 | + | 0.325629 |
DDB_G0274363 | DDB_G0274363 | DDB0232429 | CDS | 3796506 | 1536 | - | 0.212891 | |
DDB_G0274465 | DDB_G0274465 | conserved hypothetical protein contains an N-terminal hydrophobic region | DDB0232429 | CDS | 4494014 | 483 | - | 0.242236 |
DDB_G0274715 | DDB_G0274715 | DDB0232429 | CDS | 4110567 | 1332 | - | 0.231982 | |
DDB_G0275001 | DDB_G0275001 | DDB0232429 | CDS | 4873769 | 564 | + | 0.351064 | |
DDB_G0275353 | DDB_G0275353 | DDB0232429 | CDS | 5409975 | 1443 | + | 0.27027 | |
DDB_G0275399 | DDB_G0275399 | DDB0232429 | CDS | 5375069 | 6531 | + | 0.239473 | |
DDB_G0275513 | DDB_G0275513 | conserved in bacteria plants and protozoans contains two transmembrane domains | DDB0232429 | CDS | 6033383 | 315 | - | 0.28254 |
DDB_G0275543 | DDB_G0275543 | DDB0232429 | CDS | 5736589 | 1005 | + | 0.21791 | |
DDB_G0275599 | DDB_G0275599 | DDB0232429 | CDS | 5578557 | 768 | - | 0.251302 | |
DDB_G0275625 | DDB_G0275625 | DDB0232429 | CDS | 5947660 | 876 | + | 0.276256 | |
DDB_G0275805 | DDB_G0275805 | DDB0232429 | CDS | 5565701 | 2154 | + | 0.285051 | |
DDB_G0275899 | DDB_G0275899 | contains 12 putative transmembrane domains similar to D. purpureum protein | DDB0232429 | CDS | 5966546 | 3738 | - | 0.277956 |
DDB_G0276015 | DDB_G0276015 | DDB0232429 | CDS | 6195575 | 1545 | - | 0.264725 | |
DDB_G0276075 | DDB_G0276075 | DDB0232429 | CDS | 6429266 | 1113 | + | 0.297394 | |
DDB_G0276135 | DDB_G0276135 | DDB0232429 | CDS | 6238985 | 918 | + | 0.237473 | |
DDB_G0276583 | DDB_G0276583 | DDB0232429 | CDS | 7017424 | 2673 | - | 0.171343 | |
DDB_G0276697 | DDB_G0276697 | DDB0232429 | CDS | 7143862 | 672 | + | 0.27381 | |
DDB_G0276705 | DDB_G0276705 | DDB0232429 | CDS | 7149874 | 672 | + | 0.278274 | |
DDB_G0276739 | DDB_G0276739 | DDB0232429 | CDS | 7159124 | 639 | + | 0.280125 | |
DDB_G0276745 | DDB_G0276745 | DDB0232429 | CDS | 7155346 | 672 | + | 0.275298 | |
DDB_G0276747 | DDB_G0276747 | DDB0232429 | CDS | 7151707 | 672 | + | 0.285714 | |
DDB_G0276817 | DDB_G0276817 | DDB0232429 | CDS | 7392401 | 744 | - | 0.270161 | |
DDB_G0277201 | DDB_G0277201 | DDB0232429 | CDS | 7738970 | 717 | - | 0.377964 | |
DDB_G0277475 | DDB_G0277475 | DDB0232429 | CDS | 8147736 | 1395 | + | 0.317563 | |
DDB_G0277631 | DDB_G0277631 | DDB0232429 | CDS | 8282560 | 633 | - | 0.281201 | |
DDB_G0277687 | DDB_G0277687 | DDB0232429 | CDS | 8316109 | 5757 | + | 0.258121 | |
DDB_G0277699 | DDB_G0277699 | DDB0232429 | CDS | 8366249 | 681 | - | 0.234949 | |
DDB_G0277895 | DDB_G0277895 | DDB0232430 | CDS | 94751 | 462 | + | 0.409091 | |
DDB_G0278163 | DDB_G0278163 | contains a conserved TM2 domain a pair of transmembrane alpha helices connected by a short linker | DDB0232430 | CDS | 387740 | 486 | - | 0.37037 |
DDB_G0278331 | DDB_G0278331 | DDB0232430 | CDS | 711190 | 2481 | + | 0.294236 | |
DDB_G0278355 | DDB_G0278355 | DDB0232430 | CDS | 739670 | 2070 | + | 0.282126 | |
DDB_G0278459 | DDB_G0278459 | DDB0232430 | CDS | 909148 | 327 | - | 0.24159 | |
DDB_G0278491 | DDB_G0278491 | DDB0232430 | CDS | 965453 | 1356 | - | 0.231563 | |
DDB_G0278541 | DDB_G0278541 | MBOAT family protein membrane proteins that contains a variety of acyltransferase enzymes most similar to S. cerevisiae ALE1 and mammalian MBOAT2 contains 9 predicted transmembrane domains | DDB0232430 | CDS | 1041012 | 1410 | - | 0.334752 |
DDB_G0278709 | DDB_G0278709 | DDB0232430 | CDS | 1084792 | 1122 | + | 0.292335 | |
DDB_G0278747 | DDB_G0278747 | DDB0232430 | CDS | 1113093 | 1689 | + | 0.255773 | |
DDB_G0278989 | DDB_G0278989 | DDB0232430 | CDS | 1479334 | 465 | + | 0.331183 | |
DDB_G0279093 | DDB_G0279093 | similar to kelch proteins that contain the BTBPOZ domain and are actin binding proteins such as mayven and actinfilin the BTBPOZ domain contains the K channel tertramerization domain | DDB0232430 | CDS | 1618503 | 2349 | + | 0.257982 |
DDB_G0279131 | DDB_G0279131 | GFA enzymes catalyze the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione all known members of this family contain 5 strongly conserved cysteine residues | DDB0232430 | CDS | 1671588 | 465 | - | 0.292473 |
DDB_G0279299 | DDB_G0279299 | DDB0232430 | CDS | 1899915 | 411 | + | 0.277372 | |
DDB_G0279531 | DDB_G0279531 | DDB0232430 | CDS | 2217133 | 699 | - | 0.226037 | |
DDB_G0279743 | DDB_G0279743 | DDB0232430 | CDS | 2495088 | 1248 | - | 0.260417 | |
DDB_G0279753 | DDB_G0279753 | DDB0232430 | CDS | 2506085 | 3855 | + | 0.239948 | |
DDB_G0279829 | DDB_G0279829 | contains six putative transmembrane domains and is similar to DUF1295 a protein family of unknown function | DDB0232430 | CDS | 2599428 | 804 | - | 0.24005 |
DDB_G0279843 | DDB_G0279843 | DDB0232430 | CDS | 2627370 | 816 | + | 0.305147 | |
DDB_G0279905 | DDB_G0279905 | DDB0232430 | CDS | 2680036 | 876 | + | 0.223744 | |
DDB_G0280065 | DDB_G0280065 | DDB0232430 | CDS | 2880772 | 4209 | + | 0.274174 | |
DDB_G0280069 | DDB_G0280069 | DDB0232430 | CDS | 2889026 | 1032 | - | 0.263566 | |
DDB_G0280445 | DDB_G0280445 | GFA enzymes catalyze the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione all known members of this family contain 5 strongly conserved cysteine residues | DDB0232430 | CDS | 3367339 | 432 | - | 0.270833 |
DDB_G0280551 | DDB_G0280551 | DDB0232430 | CDS | 3483317 | 1038 | + | 0.273603 | |
DDB_G0280783 | DDB_G0280783 | DDB0232430 | CDS | 3739979 | 375 | + | 0.248 | |
DDB_G0281425 | DDB_G0281425 | DDB0232430 | CDS | 4468486 | 1356 | - | 0.285398 | |
DDB_G0281625 | DDB_G0281625 | conserved hypothetical protein present in bacteria nematodes plants and fungi | DDB0232430 | CDS | 4723898 | 462 | - | 0.242424 |
DDB_G0281875 | DDB_G0281875 | DDB0232430 | CDS | 5056031 | 612 | + | 0.320261 | |
DDB_G0282549 | DDB_G0282549 | DDB0232430 | CDS | 5917328 | 924 | - | 0.212121 | |
DDB_G0282879 | DDB_G0282879 | DDB0232430 | CDS | 6331837 | 861 | - | 0.24158 | |
DDB_G0282971 | DDB_G0282971 | DDB0232431 | CDS | 74287 | 2331 | + | 0.299013 | |
DDB_G0283145 | DDB_G0283145 | DDB0232431 | CDS | 254487 | 771 | - | 0.32166 | |
DDB_G0283437 | DDB_G0283437 | DDB0232431 | CDS | 697659 | 621 | + | 0.281804 | |
DDB_G0283521 | DDB_G0283521 | DDB0232431 | CDS | 678402 | 3705 | - | 0.215385 | |
DDB_G0283925 | DDB_G0283925 | DDB0232431 | CDS | 1306681 | 465 | - | 0.324731 | |
DDB_G0284135 | DDB_G0284135 | DDB0232431 | CDS | 1634829 | 2763 | + | 0.312704 | |
DDB_G0284383 | DDB_G0284383 | DDB0232431 | CDS | 1920700 | 2409 | + | 0.288501 | |
DDB_G0284461 | DDB_G0284461 | DDB0232431 | CDS | 2003252 | 1872 | - | 0.277778 | |
DDB_G0284569 | DDB_G0284569 | DDB0232431 | CDS | 2167100 | 2379 | + | 0.226566 | |
DDB_G0284895 | DDB_G0284895 | contains an N-terminal SCP domain that occurs in prokaryotic and eukaryotic proteins proposed to be Ca chelating serine proteases also contains two C-terminal WSC domains which are putative carbohydrate binding domains | DDB0232431 | CDS | 2608632 | 2283 | + | 0.297854 |
DDB_G0285577 | DDB_G0285577 | DDB0232431 | CDS | 3396934 | 1275 | - | 0.219608 | |
DDB_G0285595 | DDB_G0285595 | DDB0232431 | CDS | 3427765 | 573 | + | 0.249564 | |
DDB_G0285825 | DDB_G0285825 | DDB0232431 | CDS | 3705430 | 468 | - | 0.273504 | |
DDB_G0286045 | DDB_G0286045 | one of many putative Dictyostelium potassium channels contains 3 pentapeptide repeats | DDB0232431 | CDS | 3992727 | 2226 | + | 0.27044 |
DDB_G0286259 | DDB_G0286259 | protein conserved in bacteria and plants D. discoideum contains a second highly similar protein ( | DDB0232431 | CDS | 4259863 | 537 | + | 0.258845 |
DDB_G0286315 | DDB_G0286315 | conserved protein contains a signal peptide and 11 transmembrane domains | DDB0232431 | CDS | 4343761 | 2028 | + | 0.296844 |
DDB_G0286377 | DDB_G0286377 | DDB0232431 | CDS | 4383620 | 2157 | - | 0.251275 | |
DDB_G0286505 | DDB_G0286505 | DDB0232431 | CDS | 4570772 | 1404 | + | 0.255698 | |
DDB_G0287015 | DDB_G0287015 | DDB0232431 | CDS | 5207077 | 414 | + | 0.345411 | |
DDB_G0287043 | DDB_G0287043 | DDB0232431 | CDS | 5225371 | 1083 | + | 0.263158 | |
DDB_G0287217 | DDB_G0287217 | DDB0232432 | CDS | 5282 | 3435 | + | 0.2131 | |
DDB_G0287311_ps | DDB_G0287311 | putative pseudogene similar to D. discoideum genes | DDB0232432 | CDS | 113384 | 336 | - | 0.27381 |
DDB_G0287439 | DDB_G0287439 | DDB0232432 | CDS | 148729 | 888 | - | 0.269144 | |
DDB_G0287543 | DDB_G0287543 | very similar to H. sapiens B-cell receptor-associated protein 29 and 31 (BCAP2931) and S. cerevisiae endoplasmic reticulum transmembrane protein 1 and 3 (YET13) contains a putative signal peptide and two transmembrane domains | DDB0232432 | CDS | 400560 | 588 | + | 0.270408 |
DDB_G0287671 | DDB_G0287671 | DDB0232432 | CDS | 512195 | 633 | + | 0.28278 | |
DDB_G0287757 | DDB_G0287757 | ortholog of the conserved IMPACT (Imprinted and ancient) protein a translational regulator that ensures constant high levels of translation under amino acid starvation | DDB0232432 | CDS | 661336 | 1038 | + | 0.233141 |
DDB_G0287989 | DDB_G0287989 | DDB0232432 | CDS | 937712 | 1149 | - | 0.255004 | |
DDB_G0288227 | DDB_G0288227 | similar to the mammalian SET domain-containing protein 7 (SETD7) a histone methyltransferase that specifically monomethylates Lys-4 of histone H3 | DDB0232432 | CDS | 1280700 | 1194 | + | 0.303183 |
DDB_G0288493 | DDB_G0288493 | DDB0232432 | CDS | 1604662 | 480 | - | 0.30625 | |
DDB_G0288847 | DDB_G0288847 | DDB0232432 | CDS | 2055893 | 450 | - | 0.295556 | |
DDB_G0289063 | DDB_G0289063 | DDB0232432 | CDS | 2312279 | 816 | + | 0.281863 | |
DDB_G0289191 | DDB_G0289191 | DDB0232432 | CDS | 2454071 | 837 | + | 0.216249 | |
DDB_G0289321 | DDB_G0289321 | DDB0232432 | CDS | 2637678 | 2571 | + | 0.28238 | |
DDB_G0289585 | DDB_G0289585 | leucine-rich repeat protein with filaminABP280 at the carboxyl terminus | DDB0232432 | CDS | 2989530 | 1497 | - | 0.297261 |
DDB_G0289707 | DDB_G0289707 | DDB0232432 | CDS | 3143077 | 1071 | + | 0.267974 | |
DDB_G0289715 | DDB_G0289715 | DDB0232432 | CDS | 3153407 | 846 | - | 0.326241 | |
DDB_G0289729 | DDB_G0289729 | DDB0232432 | CDS | 3173059 | 534 | - | 0.237828 | |
DDB_G0289733 | DDB_G0289733 | similar to fungal and plant proteins contains 4 putative transmembrane domains | DDB0232432 | CDS | 3177932 | 561 | - | 0.28877 |
DDB_G0289831 | DDB_G0289831 | contains a HDc domain (metal-dependent phosphohydrolases with conserved | DDB0232432 | CDS | 3320745 | 657 | + | 0.210046 |
DDB_G0290007 | DDB_G0290007 | DDB0232432 | CDS | 3538386 | 591 | - | 0.233503 | |
DDB_G0290785 | DDB_G0290785 | DDB0232432 | CDS | 4596636 | 1551 | - | 0.294004 | |
DDB_G0290965 | DDB_G0290965 | DDB0232432 | CDS | 4802105 | 1728 | - | 0.23669 | |
DDB_G0291181 | DDB_G0291181 | DDB0232432 | CDS | 5105448 | 1080 | + | 0.327778 | |
DDB_G0291261 | DDB_G0291261 | protein conserved in bacteria and plants D. discoideum contains a second highly similar protein ( | DDB0232433 | CDS | 21629 | 558 | + | 0.283154 |
DDB_G0291532 | DDB_G0291532 | DDB0232433 | CDS | 486511 | 858 | + | 0.244755 | |
DDB_G0291554 | DDB_G0291554 | DDB0232433 | CDS | 506713 | 2334 | + | 0.340189 | |
DDB_G0291718 | DDB_G0291718 | DDB0232433 | CDS | 724492 | 1395 | + | 0.267384 | |
DDB_G0291800 | DDB_G0291800 | GFA enzymes catalyze the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione all known members of this family contain 5 strongly conserved cysteine residues | DDB0232433 | CDS | 768935 | 390 | - | 0.274359 |
DDB_G0292044 | DDB_G0292044 | DDB0232433 | CDS | 1069821 | 1617 | + | 0.246753 | |
DDB_G0292070 | DDB_G0292070 | DDB0232433 | CDS | 1148827 | 2484 | - | 0.296699 | |
DDB_G0292288 | DDB_G0292288 | DDB0232433 | CDS | 1393939 | 1008 | - | 0.318452 | |
DDB_G0292342 | DDB_G0292342 | DDB0232433 | CDS | 1441126 | 1017 | + | 0.212389 | |
DDB_G0292722 | DDB_G0292722 | DDB0232433 | CDS | 1834902 | 1026 | - | 0.246589 | |
DDB_G0292740 | DDB_G0292740 | related to H. sapiens BCSC-1 (LOH11CR2A) a possible tumor suppressor gene | DDB0232433 | CDS | 2078010 | 2733 | + | 0.279546 |
DDB_G0292952 | DDB_G0292952 | DDB0232433 | CDS | 2292229 | 2727 | - | 0.19802 | |
DDB_G0293042 | DDB_G0293042 | DDB0232433 | CDS | 2379108 | 1251 | - | 0.28697 | |
DDB_G0293044 | DDB_G0293044 | DDB0232433 | CDS | 2381806 | 2151 | - | 0.273826 | |
DDB_G0293206 | DDB_G0293206 | DDB0232433 | CDS | 2715182 | 549 | - | 0.202186 | |
DDB_G0293370 | DDB_G0293370 | DDB0232433 | CDS | 2797816 | 318 | + | 0.289308 | |
DDB_G0293404 | DDB_G0293404 | poorly characterized but highly conserved protein may function as a tRNA m5C methyltransferase chaperone | DDB0232433 | CDS | 2846362 | 456 | - | 0.265351 |
DDB_G0293866 | DDB_G0293866 | bCommunity annotation:b DDB_G0293866 has both N and C-terminal domains similar to aprataxin and contains a poly-ADP ribose binding domain. Aprataxin is suspected to play a role in several different DNA repair pathways specifically by resolving abortive ligation intermediates [see Ahe et. al Nature 443 713-6 (2006) Rass et al. JBC 282 9469-9474 (2007).]br DDB_GO293866 is 5-fold overexpressed in a Dicty strain in which the retinoblastoma-like gene rblA has been disrupted (Doquang et al in preparation). Genes whose products are involved in replication-coupled DNA repair are generally overexpressed 3 to 6-fold in this strain while genes in replication-independent repair pathways are overexpressed by smaller factors if at all. In mammalian cells aprataxin interacts with XRCC1 and Ligase3 which are involved in (replication-independent) excision repair. The corresponding Dictyostelium genes are overexpressed less than twofold in the rblA-disruptant. Harry MacWilliams September 2009br | DDB0232433 | CDS | 3400165 | 1692 | - | 0.22695 |
DDB_G0293922 | DDB_G0293922 | DDB0232433 | CDS | 3484508 | 1146 | + | 0.222513 | |
DDB_G0293938 | DDB_G0293938 | DDB0232433 | CDS | 3532350 | 1788 | + | 0.266779 | |
DDB_G0293946 | DDB_G0293946 | conserved protein similar to S. cerevisiae EMI5 a mitochondrial protein which is involved in meiotic-specific transcription and sporulation | DDB0232433 | CDS | 3558856 | 426 | + | 0.230047 |
DDB_G0295809 | DDB_G0295809 | DDB0232429 | CDS | 985804 | 303 | - | 0.214521 | |
adi1 | DDB_G0291376 | DDB0232433 | CDS | 203637 | 444 | - | 0.259009 | |
armc8 | DDB_G0270626 | DDB0232428 | CDS | 3447052 | 2109 | + | 0.288288 | |
arv1 | DDB_G0290221 | ortholog of in S. cerevisiae ARV1 that transports glycosylphosphatidylinositol intermediates into the ER lumen required for normal intracellular sterol distribution and for sphingolipid metabolism and required for viability in the absence of ARE2 (ACAT-related enzyme 2) | DDB0232432 | CDS | 3814762 | 741 | + | 0.264507 |
bxdc1 | DDB_G0292216 | ortholog of S. cerevisiae RPF2 and H. sapiens BXDC1 a nucleolar protein involved in the assembly of the large ribosomal subunit | DDB0232433 | CDS | 1328996 | 924 | - | 0.29329 |
ccdc130 | DDB_G0281599 | DDB0232430 | CDS | 4696808 | 978 | + | 0.216769 | |
ccdc94 | DDB_G0279481 | conserved hypothetical protein containing domain of unknown function DUF572 ortholog of human CCDC94 and yeast YJU2CWF16 believed to be involved in mRNA splicing | DDB0232430 | CDS | 2120888 | 975 | + | 0.246154 |
coq9 | DDB_G0274457 | ortholog of the conserved COQ9 a protein which in S. cerevisiae is required for ubiquinone (coenzyme Q) biosynthesis | DDB0232429 | CDS | 4525163 | 924 | - | 0.243506 |
derl1 | DDB_G0288833 | component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins contains 5 putative transmembrane domains | DDB0232432 | CDS | 2045678 | 729 | - | 0.292181 |
derl2 | DDB_G0285131 | component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins contains 5 putative transmembrane domains | DDB0232431 | CDS | 2896240 | 765 | - | 0.28366 |
dph3 | DDB_G0277061 | C-terminal half very similar to the conserved DPH3 the predicted Dictyostelium protein contains an additional repetitive N-terminal part that is not present in other species | DDB0232429 | CDS | 7407171 | 528 | - | 0.238636 |
emg1 | DDB_G0272732 | ortholog of S. cerevisiae and H. sapiens EMG1 involved in 40S ribosome biogenesis | DDB0232429 | CDS | 2220282 | 1017 | + | 0.298918 |
fam96A | DDB_G0292558 | DDB0232433 | CDS | 1882209 | 453 | - | 0.233996 | |
fam96B | DDB_G0283801 | DDB0232431 | CDS | 1121919 | 492 | + | 0.264228 | |
gacHH | DDB_G0272080 | DDB0232429 | CDS | 1238870 | 4572 | - | 0.302275 | |
gefAA | DDB_G0289613 | putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active form | DDB0232432 | CDS | 3026939 | 4116 | - | 0.276968 |
gefF | DDB_G0293006 | putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active form | DDB0232433 | CDS | 2493284 | 3384 | - | 0.330378 |
gefL | DDB_G0276371 | putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active form | DDB0232429 | CDS | 6706766 | 7071 | - | 0.28327 |
gefV | DDB_G0268578 | putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active form contains a RasGEF domain and 10 leucine-rich repeats | DDB0232428 | CDS | 1563062 | 5949 | + | 0.291478 |
gins1 | DDB_G0289271 | subunit 1 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevis | DDB0232432 | CDS | 2571168 | 576 | + | 0.243056 |
gins2 | DDB_G0293564 | subunit 2 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevis | DDB0232433 | CDS | 3050595 | 672 | - | 0.25 |
gins3 | DDB_G0291506 | subunit 3 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevis | DDB0232433 | CDS | 450396 | 798 | - | 0.211779 |
gins4 | DDB_G0269324 | subunit 4 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevis | DDB0232428 | CDS | 2543534 | 636 | - | 0.210692 |
gxcL | DDB_G0290023 | DDB0232432 | CDS | 3553377 | 2418 | - | 0.296112 | |
iliN | DDB_G0278481 | conserved protein induced by Legionella pneumophila infection | DDB0232430 | CDS | 950150 | 1527 | + | 0.362803 |
isca1 | DDB_G0280173 | DDB0232430 | CDS | 3050099 | 420 | + | 0.290476 | |
isca2 | DDB_G0284809 | DDB0232431 | CDS | 2506040 | 630 | - | 0.249206 | |
jcdG | DDB_G0287513 | conserved protein similar to H. sapiens C14orf169 | DDB0232432 | CDS | 349945 | 1545 | - | 0.322977 |
kctd9 | DDB_G0291330 | highly similar to vertebrate potassium channel tetramerization domain-containing proteins contains four pentapeptide repeats and a doublecourtin domain enriched in gametes | DDB0232433 | CDS | 130125 | 1467 | + | 0.324472 |
lrrA | DDB_G0294094 | putative ortholog of H. sapiens SHOC2 also known as Ras-binding protein Sur-8 | DDB0232429 | CDS | 440350 | 1533 | + | 0.332681 |
med12 | DDB_G0281277 | putative ortholog of the mediator of RNA polymerase II transcription subunit 12 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery | DDB0232430 | CDS | 4322929 | 8196 | - | 0.276232 |
med16 | DDB_G0279157 | putative ortholog of the poorly conserved mediator of RNA polymerase II transcription subunit 16 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA | DDB0232430 | CDS | 1701022 | 4533 | + | 0.270682 |
med26 | DDB_G0275733 | putative ortholog of the poorly conserved mediator of RNA polymerase II transcription subunit 26 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery | DDB0232429 | CDS | 5914994 | 6222 | + | 0.275635 |
midA | DDB_G0282615 | conserved protein required for mitochondrial complex I assembly both in Dictyostelium and in human interacts with the mitochondrial complex I protein | DDB0232430 | CDS | 6003476 | 1455 | + | 0.309278 |
mpl1 | DDB_G0269918 | negatively regulates the phosphorylation state of Erk2 expressed weakly in vegetative cells and maximally at aggregation highly similar to neighboring gene | DDB0232428 | CDS | 3862624 | 2505 | + | 0.261078 |
mpl2 | DDB_G0270688 | highly similar to neighboring gene | DDB0232428 | CDS | 3859398 | 2088 | + | 0.234195 |
mybH | DDB_G0277927 | DDB0232430 | CDS | 16340 | 3654 | - | 0.246305 | |
nif3 | DDB_G0270854 | ortholog of human NIF3L1 belongs to the UPF0135 (NIF3) family | DDB0232428 | CDS | 2581654 | 1065 | - | 0.266667 |
orfR1062 | DDB_G0272114 | DDB0232429 | CDS | 1665521 | 2322 | - | 0.316107 | |
pigL | DDB_G0293136 | DDB0232433 | CDS | 2582359 | 777 | + | 0.245817 | |
pigV | DDB_G0280891 | DDB0232430 | CDS | 3836784 | 1908 | - | 0.22065 | |
pigW | DDB_G0286111 | DDB0232431 | CDS | 3995640 | 1479 | - | 0.257606 | |
pprA | DDB_G0284039 | DDB0232431 | CDS | 1595576 | 1011 | - | 0.2364 | |
pus7 | DDB_G0271632 | ortholog of S. cerevisiae PUS7 which catalyzes pseudouridylation at position 35 in U2 snRNA position 50 in 5S rRNA position 13 in cytoplasmic tRNAs and position 35 in pre-tRNA(Tyr) conserved in archaea vertebrates and some bacteria | DDB0232429 | CDS | 580601 | 2190 | + | 0.296347 |
roco10 | DDB_G0291710 | member of the TKL (tyrosine kinase-like) group and the ROCO family of protein kinases contains RhoGAP LRR Roc COR RGS (regulator of G-protein signaling) Kelch repeats and protein kinase domains | DDB0232433 | CDS | 648952 | 7941 | - | 0.290769 |
rsc43 | DDB_G0285251 | DDB0232431 | CDS | 3035959 | 771 | - | 0.293126 | |
sigH | DDB_G0276757 | expressed in prespore cells contains two predicted transmembrane domains | DDB0232429 | CDS | 7176768 | 177 | - | 0.355932 |
surf1-1 | DDB_G0272889 | ortholog of SURF1 encoding a factor involved in the biogenesis of cytochrome c oxidase mutated in Leigh syndrome there is a second copy of this gene | DDB0232429 | CDS | 2379312 | 813 | - | 0.280443 |
surf1-2 | DDB_G0274001 | ortholog of SURF1 encoding a factor involved in the biogenesis of cytochrome c oxidase mutated in Leigh syndrome there is a second copy of this gene | DDB0232429 | CDS | 3651662 | 813 | + | 0.280443 |
thg1 | DDB_G0291830 | conserved eukaryotic protein that has been shown in S. cerevisiae to be an essential tRNAHis guanylyltransferase that adds a guanosine residue to the 5' end of tRNAHis after transcription and RNase P cleavage conserved domain also known as DUF549 domain | DDB0232433 | CDS | 833386 | 771 | + | 0.265888 |
tmem14A | DDB_G0288759 | one of two Dictyostelium proteins in the eukaryotic transmembrane protein 14 (TMEM14) family contains four putative transmembrane domains | DDB0232432 | CDS | 1930552 | 309 | - | 0.304207 |
ugt1 | DDB_G0290339 | CAZy family GT28 contains a glycosyltransferase 28 domain and a partial MurG acetylglucosaminetransferase domain | DDB0232432 | CDS | 3987458 | 1197 | + | 0.233918 |
utp11 | DDB_G0270230 | DDB0232428 | CDS | 4445249 | 753 | + | 0.260292 | |
utp14 | DDB_G0279371 | DDB0232430 | CDS | 2000722 | 2964 | - | 0.263833 | |
vilD | DDB_G0282725 | belongs to the villingelsolin family contains 7 gelsolin-like repeats and one villin headpiece domain | DDB0232430 | CDS | 6207123 | 5328 | - | 0.306869 |