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2024-05-19 16:48:24

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Polysphondylium pallidum, PN500

Number of genes found: 127

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10082 PPL_10613 EXOLTKG01B86TH-3_part2 CDS566168 1653 - 0.402904
g10159 PPL_10689 EXOLTKG01B86TH-3_part2 CDS797843 2160 + 0.428241
g10264 PPL_10814 very similar to A. thaliana AHL and SAL1 phosphatases and S. pombe tol1 (halotolerance protein) all related to the S. cerevisiae HAL2 these proteins are 3'-phosphoadenosine-5'-phosphate (PAP) phosphatases that also act as inositol polyphosphate 1-phosphatases.EXOLTKG01B86TH-3y_part1 CDS226476 1002 + 0.423154
g10326 PPL_10878 EXOLTKG01B86TH-3y_part1 CDS392939 2445 + 0.361554
g10381 PPL_10939 EXOLTKG01B86TH-3y_part2 CDS66355 1680 - 0.34881
g10557 PPL_13628 EXOLTKG02GJRTE-5 CDS454310 1086 - 0.360958
g10671 PPL_11263 ortholog of the human SOD2 the mitochondrial superoxide dismutase belongs to the ironmanganese superoxide dismutase familyPN500-F-W-a08d11.p658-5_part2 CDS289952 684 + 0.444444
g10753 PPL_11343 PN500-F-W-a08d11.p658-5_part2 CDS528576 4200 - 0.443571
g10795 PPL_11385 PN500-F-W-a08d11.p658-5_part2 CDS673563 3309 - 0.458144
g10804 PPL_11393 PN500-F-W-a08d11.p658-5_part2 CDS699396 1587 + 0.377442
g10864 PPL_11463 PN500-F-W-a08d11.p658-5_part2 CDS859123 1506 + 0.460823
g11051 PPL_11802 PN500-G-d-72b01.r1-5 CDS184712 1554 + 0.400257
g11073 PPL_11828 PN500-G-d-72b01.r1-5 CDS255915 585 + 0.329915
g11173 PPL_11932 PN500-G-d-72b01.r1-5 CDS533719 3600 + 0.439444
g11248 PPL_12005 PN500-G-d-72b01.r1-5 CDS735411 2481 - 0.351471
g11293 PPL_11557 PN500-G-d-188d09.r1-5 CDS41765 3876 + 0.386223
g11418 PPL_00046 contig_new08661_1.exp-5 CDS120423 3867 + 0.431084
g1253 PPL_01462 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimers br bNomenclature conflict:b Do not confuse this gene with clc also known as clcA encoding the clathrin light chainDPPA0090b03.f1-3_x_part2 CDS208249 2505 - 0.434331
g128 PPL_00227 superoxide dismutase of the SOD1 family expressed at constant levels throughout the life cycle and upregulated upon oxidative stress enriched in prespore cellsDPPA0004F08.r1-5_part2 CDS364808 351 - 0.48433
g1327 PPL_01538 DPPA0090b03.f1-3_x_part3 CDS44498 2961 - 0.46741
g1392 PPL_01606 DPPA0090b03.f1-3_x_part3 CDS224979 1212 + 0.431518
g1451 PPL_01672 DPPA0090b03.f1-3_x_part3 CDS387416 1008 + 0.46131
g1499 PPL_01728 similar to Arabidopsis AMT1 involved in transporting ammonia in the environment into the cell contains 11 transmembrane domainsDPPA0090b03.f1-3_x_part3 CDS527361 1272 + 0.492138
g1608 PPL_12847 DPPA0090b03.f1-3_x_part3 CDS821929 2769 + 0.346334
g1858 PPL_02109 DPPA0090b03.f1-3_x_part3 CDS1540562 5058 + 0.410439
g1868 PPL_02119 DPPA0090b03.f1-3_x_part3 CDS1573555 1341 + 0.416107
g190 PPL_00295 DPPA0004F08.r1-5_part2 CDS537130 2763 - 0.435396
g2062 PPL_02329 DPPA0090b03.f1-3_x_part3 CDS2168227 4368 - 0.389881
g2153 PPL_02431 DPPA0090b03.f1-3_x_part3 CDS2406877 5463 - 0.406004
g2157 PPL_02435 DPPA0090b03.f1-3_x_part3 CDS2418494 1536 - 0.411458
g2224 PPL_02516 DPPA0090b03.f1-3_x_part4 CDS180421 2160 + 0.378241
g2225 PPL_02517 P-type ATPase (E1-E2) ortholog of human ATP9B and yeast NEO1 which is involved in transport from the Golgi to the ERDPPA0090b03.f1-3_x_part4 CDS184436 3879 + 0.392369
g2561 PPL_02881 DPPA0090b03.f1-3_y_part1 CDS777401 1329 + 0.456734
g2652 PPL_02987 DPPA0090b03.f1-3_y_part1 CDS1032667 834 - 0.454436
g2762 PPL_03111 homologous to bacterial genes that are involved in the transport of arsenate selenate and other anionic compounds outside the cellDPPA0090b03.f1-3_y_part1 CDS1356597 1026 - 0.365497
g278 PPL_00386 DPPA0004F08.r1-5_part2 CDS806524 3240 - 0.353704
g2869 PPL_12998 DPPA0090b03.f1-3_y_part1 CDS1636403 3282 + 0.418038
g3042 PPL_03415 DPPA0090b03.f1-3_y_part1 CDS2100567 2340 + 0.382906
g3077 PPL_03451 ortholog of bacterial Mgsup2sup transporter mgtA contains eight transmembrane domainsDPPA0090b03.f1-3_y_part1 CDS2187122 2808 - 0.445157
g3108 PPL_03487 member of the ZIP (Zrt- and Irt-like Protein) family capable of transporting zinc and other metal ions contains 6 transmembrane domainsDPPA0090b03.f1-3_y_part1 CDS2281990 1047 + 0.439351
g3125 PPL_03538 catalyzes the reaction NADPH n oxidized hemoprotein NADP() n reduced hemoprotein similar to the H. sapiens POR protein that is defect in adrenal hyperplasia variant type (AHV) a syndrome with disordered steroidogenesisDPPA0186d03.f1-5 CDS25510 1926 - 0.441848
g3275 PPL_13048 DPPB0337b12.r1-5 CDS176828 1041 + 0.414986
g3307 PPL_03746 DPPB0337b12.r1-5 CDS255629 1554 + 0.433719
g3456 PPL_03917 similar to bacterial PPK (PPK1 family) which synthesizes poly P a polymer of up to hundreds of phosphate residuesDPPB0337b12.r1-5 CDS660457 3612 - 0.419435
g3563 PPL_04029 DPPB0337b12.r1-5 CDS949786 558 - 0.342294
g3717 PPL_04200 DPPB0360e11.f1-5 CDS45539 2874 - 0.362909
g3758 PPL_04245 DPPB0360e11.f1-5 CDS161115 1764 - 0.447846
g3774 PPL_04263 catalyzes the reaction 2Hsub2subOsub2sub catalase 2Hsub2subO Osub2sub expressed throughout development expression restricted to prestalk cells during post-aggregationbr bNomenclature conflict:b Do not confuse the acrA gene encoding the late development adenylate cyclase ACR with the genetic locus acrA corresponding to the catA catalase that confers resistance to acriflavin (DPPB0360e11.f1-5 CDS202680 1491 + 0.474178
g3881 PPL_04385 DPPB0360e11.f1-5 CDS567516 846 + 0.297872
g3948 PPL_04459 DPPB0360e11.f1-5 CDS749554 1743 - 0.45611
g4007 PPL_04527 DPPB0360e11.f1-5 CDS945466 2085 + 0.383213
g4191 PPL_04728 E0KFERV02EE9X2-3_part1 CDS441691 2904 + 0.435262
g4217 PPL_04764 E0KFERV02EE9X2-3_part1 CDS537461 2418 - 0.392887
g4465 PPL_05062 E3JQK7F01CUWUC-3_part1 CDS31916 2943 - 0.348624
g4669 PPL_05289 catalyzes the reaction ATP Hsub2subO Nasupsupn Ksupsupout ADP phosphate Nasupsupout Ksupsupn br contains 10 transmembrane domainsE3JQK7F01EFZL8-5 CDS98733 3096 + 0.399871
g4782 PPL_05416 E3JQK7F01EFZL8-5 CDS432101 1674 - 0.366189
g4829 PPL_05467 E3JQK7F01EFZL8-5 CDS577309 1344 + 0.446429
g4921 PPL_05564 E3JQK7F01EFZL8-5 CDS820710 207 - 0.425121
g5018 PPL_05660 E3JQK7F01EFZL8-5 CDS1074722 1155 + 0.359307
g5019 PPL_05661 belongs to a family of zinc transporters that are integral membrane proteins which are found to increase tolerance to divalent metal ions contains 6 putative transmembrane domainsE3JQK7F01EFZL8-5 CDS1076285 1659 + 0.38698
g5058 PPL_05704 E3JQK7F01EFZL8-5 CDS1165783 2799 - 0.413362
g5134 PPL_05781 E3JQK7F01EFZL8-5 CDS1398087 2784 + 0.386853
g5138 PPL_05785 E3JQK7F01EFZL8-5 CDS1409593 1695 - 0.422419
g5185 PPL_05838 E3JQK7F02G10GF-5 CDS78319 1776 - 0.481419
g5196 PPL_05847 similar to Arabidopsis AMT1 involved in transporting ammonia in the environment into the cell contains 11 transmembrane domainsE3JQK7F02G10GF-5 CDS108306 1290 - 0.471318
g5216 PPL_05868 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimersE3JQK7F02G10GF-5 CDS172205 2241 - 0.4083
g5245 PPL_05897 E3JQK7F02G10GF-5 CDS262512 1335 - 0.412734
g534 PPL_00669 DPPA0004F08.r1-5_part3 CDS12073 2106 + 0.446819
g5361 PPL_06017 E3JQK7F02G10GF-5 CDS581444 3102 - 0.383623
g5612 PPL_06276 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimersE3JQK7F02HEVRT-5 CDS196082 2412 - 0.424959
g5731 PPL_06419 E3JQK7F02HEVRT-5 CDS583758 588 - 0.394558
g5732 PPL_06421 E3JQK7F02HEVRT-5 CDS586330 582 - 0.402062
g576 PPL_00709 P-type ATPase (E1-E2) highly similar to human ATP8A1 believed to be involved in the transport of aminophospholipidsDPPA0004F08.r1-5_part3 CDS107720 4014 - 0.431241
g5881 PPL_06577 E3JQK7F02HW0LE-5_part2 CDS1372 1272 + 0.386792
g5924 PPL_06625 E3JQK7F02HW0LE-5_part2 CDS117772 3132 + 0.450192
g6019 PPL_06742 E3JQK7F02HW0LE-5_part2 CDS377999 1815 - 0.426446
g6069 PPL_06792 E3JQK7F02HW0LE-5_part2 CDS501479 1128 - 0.414894
g6304 PPL_07043 E3JQK7F02HW0LE-5_part2 CDS1160215 1329 - 0.421369
g635 PPL_12720 DPPA0004F08.r1-5_part3 CDS282863 1014 - 0.418146
g6372 PPL_07119 E3JQK7F02HW0LE-5_part2 CDS1371353 3639 + 0.422644
g6418 PPL_07179 E3JQK7F02HW0LE-5_part2 CDS1507634 2751 - 0.39731
g6478 PPL_07243 catalyzes the reaction NADPH n oxidized hemoprotein NADP() n reduced hemoprotein involved in the metabolism of compounds that control Dictyostelium cell differentiationE3JQK7F02HW0LE-5_part2 CDS1667506 1896 - 0.434072
g6571 PPL_07346 E3JQK7F02HW0LE-5_part2 CDS1941325 3393 - 0.383142
g665 PPL_00800 DPPA0004F08.r1-5_part3 CDS361938 1695 + 0.339823
g6698 PPL_07498 EVG8W8Q01C9YYY-5_part2 CDS126045 3090 + 0.446602
g6736 PPL_07539 EVG8W8Q01EEF2G-5 CDS27100 1614 - 0.36741
g6775 PPL_07583 belongs to a family of zinc transporters that are integral membrane proteins which are found to increase tolerance to divalent metal ions contains 6 putative transmembrane domainsEVG8W8Q01EEF2G-5 CDS143632 1584 - 0.445076
g6864 PPL_07684 EVG8W8Q02J3HU6-3_part1 CDS81370 1884 + 0.393312
g6933 PPL_07752 EVG8W8Q02J3HU6-3_part1 CDS251108 2643 + 0.42868
g7025 PPL_07846 EVG8W8Q02J3HU6-3_part1 CDS521387 1731 - 0.370306
g7042 PPL_07860 EVG8W8Q02J3HU6-3_part1 CDS562562 2283 + 0.460797
g7043 PPL_13375 EVG8W8Q02J3HU6-3_part1 CDS565004 597 + 0.422111
g7056 PPL_07874 EVG8W8Q02J3HU6-3_part1 CDS603944 1479 + 0.392833
g7142 PPL_07960 EVG8W8Q02J3HU6-3_part2 CDS177257 2541 - 0.410468
g7233 PPL_08067 EVG8W8Q02J3HU6-3_part3 CDS49468 2085 + 0.370264
g7619 PPL_08517 EVG8W8Q02J3HU6-3_part3 CDS1161291 1575 + 0.415873
g7741 PPL_08646 EVKQ3GG01CS5PZ-3_part1 CDS276413 1209 + 0.497105
g7782 PPL_08697 EVKQ3GG01CS5PZ-3_part1 CDS385176 1062 + 0.449153
g789 PPL_00950 DPPA0061d07.r1-5 CDS287448 1515 + 0.438284
g8065 PPL_09008 NRAMP family protein similar to bacterial manganese transport protein mntH contains 12 transmembrane domains involved in iron homeostasis and resistance to pathogenic bacteriaEVKQ3GG01CS5PZ-3_part1 CDS1232876 1572 + 0.335242
g8073 PPL_13446 EVKQ3GG01CS5PZ-3_part1 CDS1255961 2004 - 0.433134
g8111 PPL_09054 EVKQ3GG01CS5PZ-3_part1 CDS1360787 1380 + 0.404348
g8125 PPL_09071 EVKQ3GG01CS5PZ-3_part1 CDS1396767 2775 + 0.456937
g8249 PPL_09198 EVKQ3GG01CS5PZ-3_part1 CDS1751263 1923 - 0.355174
g8281 PPL_09236 EVKQ3GG01CS5PZ-3_part1 CDS1848876 1974 + 0.39615
g8298 PPL_09257 EVKQ3GG01CS5PZ-3_part2 CDS23415 3672 - 0.363017
g8365 PPL_09330 EVKQ3GG01CS5PZ-3_part2 CDS209674 1353 - 0.414634
g8656 PPL_12290 EVKQ3GG01DOIJB_part1 CDS669962 1248 + 0.463141
g8821 PPL_12462 EVKQ3GG01DOIJB_part2 CDS276611 3354 + 0.361956
g8827 PPL_12470 EVKQ3GG01DOIJB_part2 CDS292648 1818 + 0.309131
g8833 PPL_12476 EVKQ3GG01DOIJB_part2 CDS310834 2274 + 0.418206
g888 PPL_01054 DPPA0061d07.r1-5 CDS549018 1458 + 0.432099
g8896 PPL_12544 EVKQ3GG01DOIJB_part2 CDS516671 1938 - 0.334365
g8897 PPL_12545 EVKQ3GG01DOIJB_part2 CDS519243 2880 - 0.441319
g9016 PPL_09438 EVKQ3GG02I325Y-5_part1 CDS92763 1248 - 0.358974
g9090 PPL_09524 catalyzes the reaction ATP Hsub2subO Nasupsupn Ksupsupout ADP phosphate Nasupsupout Ksupsupn br contains 10 transmembrane domainsEVKQ3GG02I325Y-5_part1 CDS305571 3810 - 0.447507
g9128 PPL_13520 EVKQ3GG02I325Y-5_part1 CDS423319 1365 - 0.454945
g9129 PPL_13521 EVKQ3GG02I325Y-5_part1 CDS424769 2262 - 0.411583
g9301 PPL_09742 EVKQ3GG02I325Y-5_part1 CDS877323 1884 - 0.392781
g9406 PPL_09861 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimersEVKQ3GG02I325Y-5_part1 CDS1218716 2475 + 0.424646
g951 PPL_01117 DPPA0061d07.r1-5 CDS737759 1560 + 0.365385
g964 PPL_01130 DPPA0061d07.r1-5 CDS762788 3291 - 0.45275
g9669 PPL_10155 EWNM59D01C4IL7-5_part1 CDS478082 681 - 0.405286
g9839 PPL_10356 EWNM59D01C4IL7-5_part1 CDS1000271 744 + 0.36828
g9892 PPL_10414 EXOLTKG01B86TH-3_part1 CDS97254 2595 - 0.416185
g9917 PPL_10442 converts 1D-myo-inositol 14-bisphosphate H2O to 1D-myo-inositol 4-phosphate phosphateEXOLTKG01B86TH-3_part2 CDS62907 879 + 0.450512
g9982 PPL_10510 EXOLTKG01B86TH-3_part2 CDS240902 1647 + 0.389192