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2024-05-19 18:45:02

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Dictyostelium discoideum AX4, AX4

Number of genes found: 440

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Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DDB_G0267448 DDB_G0267448 DDB0232428 CDS481685 1146 - 0.286213
DDB_G0267492 DDB_G0267492 putative metalloprotease of the peptidase M41 family which belong to a larger family of zinc metalloproteases includes the cell division protein FtsHDDB0232428 CDS215251 2163 - 0.314378
DDB_G0267512 DDB_G0267512 DDB0232428 CDS257711 1011 - 0.338279
DDB_G0267526 DDB_G0267526 DDB0232428 CDS272779 981 + 0.282365
DDB_G0267952 DDB_G0267952 DDB0232428 CDS1173990 831 - 0.247894
DDB_G0267994 DDB_G0267994 DDB0232428 CDS1246116 1227 - 0.326813
DDB_G0268034 DDB_G0268034 homolog of mammalian Rab GDP dissociation inhibitor alpha forms a soluble complex with Rab proteins thereby preventing exchange of GDP for GTPDDB0232428 CDS1340557 1365 + 0.347985
DDB_G0268066 DDB_G0268066 DDB0232428 CDS1394864 2595 + 0.210019
DDB_G0268138 DDB_G0268138 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232428 CDS1528262 609 + 0.302135
DDB_G0268156 DDB_G0268156 DDB0232428 CDS1548695 1461 - 0.216975
DDB_G0268192 DDB_G0268192 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232428 CDS1640028 465 - 0.275269
DDB_G0268334 DDB_G0268334 DDB0232428 CDS714031 2337 - 0.273427
DDB_G0268358 DDB_G0268358 ortholog of the human SDCCAG10 (Serologically Defined Colon Cancer Antigen 10) PPIase is an enzyme that accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptidesDDB0232428 CDS936052 1482 + 0.262483
DDB_G0268850 DDB_G0268850 similar though smaller than H. sapiens SACS a very large protein. The SACS defect causes autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS) a neurodegenerative disease D. discoideum contains three nearly identical genes located next to each other contains two putative ATP binding domains.DDB0232428 CDS2235139 7986 + 0.262334
DDB_G0268856 DDB_G0268856 DDB0232428 CDS2261646 1941 + 0.267388
DDB_G0268872 DDB_G0268872 similar to members of the ubiquitin specific peptidase (USP) family including USP44 and USP3DDB0232428 CDS2287976 6378 + 0.298056
DDB_G0268884 DDB_G0268884 ortholog of E. coli OsmC a stress-inducible protein there is another member of this family in Dictyostelium DDB0232428 CDS2309454 471 + 0.314225
DDB_G0268902 DDB_G0268902 DDB0232428 CDS2346148 1926 + 0.20405
DDB_G0269018 DDB_G0269018 DDB0232428 CDS2258756 1953 + 0.273938
DDB_G0269256 DDB_G0269256 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domain identical to DDB0232428 CDS2408349 465 + 0.27957
DDB_G0269260 DDB_G0269260 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232428 CDS2415581 465 + 0.273118
DDB_G0269270 DDB_G0269270 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domain identical to DDB0232428 CDS2428475 465 - 0.27957
DDB_G0269282 DDB_G0269282 DDB0232428 CDS2445906 975 - 0.324103
DDB_G0269350 DDB_G0269350 DDB0232428 CDS2573853 2109 - 0.245614
DDB_G0269392 DDB_G0269392 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232428 CDS2689530 429 - 0.275058
DDB_G0269418 DDB_G0269418 similar to E. coli OsmC a stress-inducible protein and down-regulated by hyperosmotic shock there is another member of this gene family in Dictyostelium DDB0232428 CDS2728317 489 - 0.280164
DDB_G0269736 DDB_G0269736 DDB0232428 CDS3451792 2052 - 0.207602
DDB_G0269782 DDB_G0269782 DDB0232428 CDS3553343 840 - 0.263095
DDB_G0269808 DDB_G0269808 DDB0232428 CDS3646239 465 - 0.255914
DDB_G0269860 DDB_G0269860 similar to importin-7 and importin-8 from numerous eukaryotes involved in nuclear protein importDDB0232428 CDS3747132 3198 + 0.288618
DDB_G0270088 DDB_G0270088 DDB0232428 CDS4195432 1680 - 0.325
DDB_G0270252 DDB_G0270252 DDB0232428 CDS4519307 2043 - 0.256975
DDB_G0270268 DDB_G0270268 DDB0232428 CDS4540670 1617 + 0.222016
DDB_G0270416 DDB_G0270416 DDB0232428 CDS4823455 2646 + 0.228647
DDB_G0270420 DDB_G0270420 DDB0232428 CDS4840357 966 - 0.308489
DDB_G0270694 DDB_G0270694 belongs to the band 7 proteins integral membrane proteins that ares thought to regulate cation conductance stomatin is an erythrocyte membrane protein contains one predicted transmembrane domainDDB0232428 CDS3908437 1125 - 0.310222
DDB_G0270776 DDB_G0270776 conserved eukaryotic protein of unknown function ortholog of human SPATA20 (spermatogenesis associated 20)DDB0232428 CDS4646538 2475 + 0.273939
DDB_G0271084 DDB_G0271084 DDB0232428 CDS4795072 495 + 0.240404
DDB_G0271296 DDB_G0271296 DDB0232429 CDS141746 1875 + 0.2304
DDB_G0271348 DDB_G0271348 DDB0232429 CDS62552 3114 + 0.221901
DDB_G0271700 DDB_G0271700 contains a thioredoxin domain which functions as a general disulfide isomerase enriched in gametesDDB0232429 CDS730777 900 - 0.26
DDB_G0271726 DDB_G0271726 DDB0232429 CDS858649 516 + 0.333333
DDB_G0271798 DDB_G0271798 DDB0232429 CDS755175 2511 + 0.240143
DDB_G0271892 DDB_G0271892 similar to bacterial glutathione S-transferase catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232429 CDS1035063 684 - 0.302632
DDB_G0271958 DDB_G0271958 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232429 CDS1074422 717 - 0.1841
DDB_G0272230 DDB_G0272230 DDB0232429 CDS1716242 675 - 0.245926
DDB_G0272280 DDB_G0272280 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232429 CDS1570828 546 + 0.287546
DDB_G0272298 DDB_G0272298 DDB0232429 CDS1664020 918 - 0.310458
DDB_G0272342 DDB_G0272342 DDB0232429 CDS1338747 1281 + 0.330211
DDB_G0272418 DDB_G0272418 DDB0232429 CDS1503629 399 - 0.285714
DDB_G0272632 DDB_G0272632 catalyzes the reaction RX glutathione HX R-S-glutathione there is a second copy of this gene DDB0232429 CDS2282062 597 + 0.309883
DDB_G0272700 DDB_G0272700 DDB0232429 CDS1921731 621 - 0.330113
DDB_G0272777 DDB_G0272777 member of the same super family as valosin-containing protein (VCP) and CDC48brbr bCommunity annotation:b DDB G0272777 appears to be the Dicty-specific AAA-ATPase related cdc48 (cdcD) in Dicty and other organisms. When DDB0232429 CDS2164739 2217 + 0.249436
DDB_G0272983 DDB_G0272983 contains one DnaJ N-terminal domain and one MYND-type zinc finger domain contains 8 putative transmembrane domainsDDB0232429 CDS2010405 1719 - 0.268179
DDB_G0273093 DDB_G0273093 similar to the mammalian Hypoxia up-regulated protein 1 (HYOU1) a protein that plays a role in cytoprotective cellular mechanisms triggered by oxygen deprivation there is a second copy of this gene DDB0232429 CDS2591482 2781 - 0.280834
DDB_G0273813 DDB_G0273813 similar to the mammalian Hypoxia up-regulated protein 1 (HYOU1) a protein that plays a role in cytoprotective cellular mechanisms triggered by oxygen deprivation there is a second copy of this gene DDB0232429 CDS3437085 2781 + 0.280834
DDB_G0274081 DDB_G0274081 catalyzes the reaction RX glutathione HX R-S-glutathione there is a second copy of this gene DDB0232429 CDS3748941 597 - 0.309883
DDB_G0274207 DDB_G0274207 DDB0232429 CDS4778748 3777 - 0.243315
DDB_G0274223 DDB_G0274223 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232429 CDS4720551 783 + 0.273308
DDB_G0274329 DDB_G0274329 DDB0232429 CDS3880324 609 - 0.269294
DDB_G0274345 DDB_G0274345 belongs to the band 7 proteins integral membrane proteins that ares thought to regulate cation conductance stomatin is an erythrocyte membrane protein contains an N-terminal transmembrane domain that might be a signal sequenceDDB0232429 CDS3908527 1005 + 0.271642
DDB_G0274385 DDB_G0274385 DDB0232429 CDS4876346 1077 + 0.311978
DDB_G0274657 DDB_G0274657 related to glutaredoxin which functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotidesDDB0232429 CDS4453801 432 + 0.305556
DDB_G0274705 DDB_G0274705 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232429 CDS4155932 780 + 0.261538
DDB_G0274795 DDB_G0274795 very similar to mammalian USP48 ubiquitin-specific protease catalyzes the hydrolysis of various forms of polymeric ubiquitin sequences and removes ubiquitin from larger groupsDDB0232429 CDS3857138 4074 - 0.241041
DDB_G0274827 DDB_G0274827 DDB0232429 CDS4039593 2760 - 0.267391
DDB_G0274887 DDB_G0274887 DDB0232429 CDS4345083 1044 + 0.251916
DDB_G0274897 DDB_G0274897 DDB0232429 CDS4364366 2733 - 0.312477
DDB_G0275025 DDB_G0275025 contains one thioredoxin domain similar to human PDIA6 (protein disulfide isomerase A6)DDB0232429 CDS5326205 1230 + 0.264228
DDB_G0275109 DDB_G0275109 DDB0232429 CDS5033896 1845 - 0.197832
DDB_G0275227 DDB_G0275227 similar to FKBP-type peptidyl-prolyl isomerase which functions as a receptor for immunosuppressants in vertebratesDDB0232429 CDS4935740 324 - 0.361111
DDB_G0275415 DDB_G0275415 DDB0232429 CDS5440439 8976 + 0.29434
DDB_G0275555 DDB_G0275555 DDB0232429 CDS5684935 723 + 0.271093
DDB_G0275595 DDB_G0275595 DDB0232429 CDS5571932 2052 - 0.220273
DDB_G0275693 DDB_G0275693 DDB0232429 CDS5531426 2103 + 0.300048
DDB_G0275755 DDB_G0275755 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232429 CDS5846616 597 - 0.274707
DDB_G0276057 DDB_G0276057 DDB0232429 CDS6469384 1623 - 0.32902
DDB_G0276111 DDB_G0276111 DDB0232429 CDS6270826 1248 + 0.308494
DDB_G0276169 DDB_G0276169 similar to S. cerevisiae MSP1 a mitochondrial protein involved in sorting of proteins in the mitochondriaDDB0232429 CDS6497773 993 + 0.286002
DDB_G0276351 DDB_G0276351 similar to bacterial glutathione S-transferase catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232429 CDS6703448 693 + 0.292929
DDB_G0276445 DDB_G0276445 highly similar to human HSPA5 (78 kDa glucose-regulated protein precursor GRP78) contains a predicted endoplasmic reticulum targeting sequenceDDB0232429 CDS6984336 1977 - 0.373293
DDB_G0276527 DDB_G0276527 contains 3 major domains: one RCC1 domain one protein kinase domain and one HECT domain N-terminal region beongs to the SerThr protein kinase family C-terminal region belongs to the CAMK SerThr protein kinase family.DDB0232429 CDS6772155 5664 - 0.240643
DDB_G0276625 DDB_G0276625 belongs to the drugmetabolite transporter superfamily similar to human SLC35D1 (UDP-glucuronic acidUDP-N-acetylgalactosamine transporter) and S. cerevisiae VRG4 (GDP-mannose transporter 1) contains 8 putative transmembrane domainsDDB0232429 CDS7055459 945 - 0.271958
DDB_G0277039 DDB_G0277039 DDB0232429 CDS7313618 1260 + 0.246825
DDB_G0277307 DDB_G0277307 highly similar to H. sapiens LONP1 and S. cerevisiae PIM1 Lon protease family members are often located in the mitochondria there is a second Lon protease in DictyosteliumDDB0232429 CDS7634314 2511 - 0.322979
DDB_G0277625 DDB_G0277625 DDB0232429 CDS8269607 1263 - 0.278702
DDB_G0277695 DDB_G0277695 DDB0232429 CDS8344683 1074 + 0.297952
DDB_G0277775 DDB_G0277775 DDB0232429 CDS8465643 375 - 0.333333
DDB_G0278063 DDB_G0278063 highly similar to H. sapiens LONP1 and S. cerevisiae PIM1 Lon protease family members are often located in the mitochondria there is a second Lon protease in DictyosteliumDDB0232430 CDS211823 2871 + 0.290143
DDB_G0278075 DDB_G0278075 DDB0232430 CDS233703 699 + 0.271817
DDB_G0278123 DDB_G0278123 DDB0232430 CDS326427 222 - 0.405405
DDB_G0278179 DDB_G0278179 contains two myb domains similar to Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein (NP_187752.1) and Mus musculus zuotin related factor 2 (NP_033610.1)DDB0232430 CDS400484 1905 - 0.371129
DDB_G0278233 DDB_G0278233 DDB0232430 CDS516517 915 + 0.269945
DDB_G0278333 DDB_G0278333 DDB0232430 CDS713907 1950 - 0.315385
DDB_G0278435 DDB_G0278435 DDB0232430 CDS877848 2661 - 0.269823
DDB_G0278455 DDB_G0278455 DDB0232430 CDS904324 1101 - 0.229791
DDB_G0278501 DDB_G0278501 weakly similar to yeast transmembrane ubiquitin ligase E3 (TUL1) protein involved in ubiquitinating and sorting certain membrane proteins contains 6 predicted transmembrane domains and one additional signal sequenceDDB0232430 CDS976180 2001 + 0.246877
DDB_G0278631 DDB_G0278631 putative ortholog of H. sapiens SLC35D2 UDP-N-acetylglucosamineUDP-glucoseGDP-mannose transporter contains 10 putative transmembrane domainsDDB0232430 CDS462648 1149 + 0.222802
DDB_G0278789 DDB_G0278789 similar to DNAJA3 DnaJ homolog subfamily A member 3DDB0232430 CDS1182227 1383 + 0.336226
DDB_G0278997 DDB_G0278997 conserved in bacteria and plants there is an almost identical gene DDB0232430 CDS1499624 876 + 0.270548
DDB_G0278999 DDB_G0278999 conserved in bacteria and plants there is an almost identical gene DDB0232430 CDS1501033 876 + 0.270548
DDB_G0279011 DDB_G0279011 DDB0232430 CDS1513004 270 - 0.296296
DDB_G0279049 DDB_G0279049 conserved in dictyostelids contains a predicted peroxisomal targeting signalDDB0232430 CDS1554715 2550 + 0.236863
DDB_G0279111 DDB_G0279111 DDB0232430 CDS1646736 1122 + 0.251337
DDB_G0279271 DDB_G0279271 belongs to the band 7 proteins integral membrane proteins that ares thought to regulate cation conductance stomatin is an erythrocyte membrane protein contains an N-terminal transmembrane domain that might be a signal sequenceDDB0232430 CDS1870767 1029 + 0.276968
DDB_G0279375 DDB_G0279375 related to the Ovarian Tumour (OTU) gene of Drosophila function is unknown but conserved cysteine and histidine and possibly the aspartate residues suggests that those not yet recognized as peptidases could possess cysteine protease activityDDB0232430 CDS2006606 1023 - 0.250244
DDB_G0279491 DDB_G0279491 DDB0232430 CDS2147617 1725 - 0.277681
DDB_G0279949 DDB_G0279949 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232430 CDS2741741 456 - 0.307018
DDB_G0279951 DDB_G0279951 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232430 CDS2743413 459 - 0.276688
DDB_G0279973 DDB_G0279973 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232430 CDS2800822 459 - 0.296296
DDB_G0280089 DDB_G0280089 DDB0232430 CDS2915769 1374 - 0.342795
DDB_G0280091 DDB_G0280091 homolog of human UBE2H (ubiquitin-conjugating enzyme E2 H) and S. pombe ubc8 catalyzes the covalent attachment of ubiquitin to other proteinsDDB0232430 CDS2919337 558 - 0.310036
DDB_G0280143 DDB_G0280143 DDB0232430 CDS3004846 1986 - 0.270896
DDB_G0280187 DDB_G0280187 similar to cathepsin Z a papain cysteine protease family proteinDDB0232430 CDS3078456 876 + 0.374429
DDB_G0280215 DDB_G0280215 DDB0232430 CDS3121269 1251 + 0.343725
DDB_G0280227 DDB_G0280227 DDB0232430 CDS3139657 1737 - 0.176166
DDB_G0280317 DDB_G0280317 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232430 CDS3248423 615 - 0.284553
DDB_G0280347 DDB_G0280347 DDB0232430 CDS3287782 378 + 0.306878
DDB_G0280773 DDB_G0280773 DDB0232430 CDS3724009 2985 + 0.236181
DDB_G0280877 DDB_G0280877 DDB0232430 CDS3825256 2100 + 0.261429
DDB_G0280881 DDB_G0280881 catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232430 CDS3830874 783 - 0.274585
DDB_G0280889 DDB_G0280889 DDB0232430 CDS3835530 897 - 0.238573
DDB_G0281081 DDB_G0281081 DDB0232430 CDS4027472 1944 + 0.288066
DDB_G0281369 DDB_G0281369 DDB0232430 CDS4370772 1206 - 0.308458
DDB_G0281521 DDB_G0281521 member of the bromo-AAAATPase (BRAT) class of chromatin assembly proteinsDDB0232430 CDS4480305 5403 - 0.277624
DDB_G0281527 DDB_G0281527 DDB0232430 CDS4520387 1878 + 0.205005
DDB_G0281679 DDB_G0281679 DDB0232430 CDS4804047 1176 + 0.244898
DDB_G0281775 DDB_G0281775 DDB0232430 CDS4948067 1248 + 0.306891
DDB_G0281833 DDB_G0281833 DDB0232430 CDS4994441 456 - 0.313596
DDB_G0282215 DDB_G0282215 DDB0232430 CDS5528630 1605 - 0.261682
DDB_G0282241 DDB_G0282241 DDB0232430 CDS5561439 2478 + 0.24778
DDB_G0282267 DDB_G0282267 similar to FKBP-type peptidyl-prolyl isomerase which functions as a receptor for immunosuppressants in vertebratesDDB0232430 CDS5592466 402 + 0.310945
DDB_G0282313 DDB_G0282313 DDB0232430 CDS5624970 1092 - 0.320513
DDB_G0282463 DDB_G0282463 DDB0232430 CDS5792759 2337 + 0.286264
DDB_G0282517 DDB_G0282517 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232430 CDS5877016 726 - 0.316804
DDB_G0282783 DDB_G0282783 similar to a D. purpureum proteinDDB0232430 CDS5921147 9054 + 0.230175
DDB_G0282845 DDB_G0282845 DDB0232430 CDS6289243 1224 - 0.258987
DDB_G0283033 DDB_G0283033 DDB0232431 CDS178285 2304 - 0.268229
DDB_G0283471 DDB_G0283471 DDB0232431 CDS738038 6009 - 0.192045
DDB_G0283575 DDB_G0283575 catalyzes the reaction RX glutathione HX R-S-glutathione enriched in prespore cellsDDB0232431 CDS855359 597 + 0.303183
DDB_G0283655 DDB_G0283655 DDB0232431 CDS925419 1524 - 0.224409
DDB_G0283815 DDB_G0283815 DDB0232431 CDS1148242 1332 - 0.231982
DDB_G0283979 DDB_G0283979 DDB0232431 CDS1413537 3600 + 0.265833
DDB_G0284247 DDB_G0284247 DDB0232431 CDS1749570 1854 + 0.228695
DDB_G0284249 DDB_G0284249 putative metalloprotease of the peptidase M41 family which belong to a larger family of zinc metalloproteases includes the cell division protein FtsH and the yeast mitochondrial respiratory chain complexes assembly proteinDDB0232431 CDS1751734 2295 - 0.31329
DDB_G0284263 DDB_G0284263 conserved protein ortholog of human DNAJC11DDB0232431 CDS1795281 1728 - 0.284144
DDB_G0284381 DDB_G0284381 DDB0232431 CDS1916862 3270 + 0.307951
DDB_G0284627 DDB_G0284627 belongs to the band 7 proteins integral membrane proteins that ares thought to regulate cation conductance stomatin is an erythrocyte membrane protein contains an N-terminal transmembrane domain that might be a signal sequenceDDB0232431 CDS2260399 1161 - 0.274763
DDB_G0284847 DDB_G0284847 homolog of human SDF2 (stromal cell-derived factor 2) contains 3 MIR domainsDDB0232431 CDS2556090 639 - 0.317684
DDB_G0284939 DDB_G0284939 DDB0232431 CDS2667885 396 + 0.282828
DDB_G0284941 DDB_G0284941 DDB0232431 CDS2668956 381 + 0.230971
DDB_G0285063 DDB_G0285063 similar to the H. sapiens HUWE1 an E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins.DDB0232431 CDS2707152 11379 - 0.321997
DDB_G0285145 DDB_G0285145 DDB0232431 CDS2915991 1305 + 0.2659
DDB_G0285273 DDB_G0285273 highly conserved protein containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232431 CDS3047069 474 + 0.308017
DDB_G0285333 DDB_G0285333 DDB0232431 CDS3097865 816 - 0.310049
DDB_G0285357 DDB_G0285357 similar to FKBP-type peptidyl-prolyl isomerase which functions as a receptor for immunosuppressants in vertebratesDDB0232431 CDS3165268 1095 - 0.36895
DDB_G0285389 DDB_G0285389 putative ortholog of H. sapiens UXT (ubiquitously-expressed transcript) related to prefoldin alphaDDB0232431 CDS3107718 486 - 0.201646
DDB_G0285471 DDB_G0285471 belongs to the DUF836 family similar to S. cerevisiae glutaredoxin-like protein YDR286CDDB0232431 CDS3274352 327 + 0.217125
DDB_G0285611 DDB_G0285611 DDB0232431 CDS3459087 1167 + 0.24593
DDB_G0285613 DDB_G0285613 DDB0232431 CDS3463966 1338 + 0.254111
DDB_G0285709 DDB_G0285709 DDB0232431 CDS3622848 1554 + 0.341055
DDB_G0285765 DDB_G0285765 DDB0232431 CDS3445107 2346 - 0.252771
DDB_G0286165 DDB_G0286165 DDB0232431 CDS4105304 1455 + 0.181443
DDB_G0286341 DDB_G0286341 highly similar to bacterial glutathione S-transferase catalyzes the reaction RX glutathione HX R-S-glutathioneDDB0232431 CDS4285901 975 + 0.300513
DDB_G0286401 DDB_G0286401 DDB0232431 CDS4410583 1149 - 0.238468
DDB_G0286511 DDB_G0286511 similar to human ubiquitin-conjugating enzyme E2 J2 (UBE2J2) and yeast ubiquitin-conjugating 6 (UBC6)DDB0232431 CDS4575968 726 - 0.311295
DDB_G0286765 DDB_G0286765 similar to BCS1 a mitochondrial chaperone required for assembly of cytochrome BC(1) complex expressed in pstA and pstO cells and in the upper and lower cups during culminationDDB0232431 CDS4940455 1725 + 0.276522
DDB_G0286931 DDB_G0286931 DDB0232431 CDS5091515 15669 + 0.264535
DDB_G0286955 DDB_G0286955 DDB0232431 CDS5145533 1125 - 0.277333
DDB_G0286977 DDB_G0286977 DDB0232431 CDS5148727 1143 - 0.276465
DDB_G0287077 DDB_G0287077 DDB0232431 CDS5299968 1221 + 0.22932
DDB_G0287153 DDB_G0287153 DDB0232431 CDS5400400 480 + 0.308333
DDB_G0287165 DDB_G0287165 similar to spastin (spastic paraplegia 4 protein) a mammalian ATP-dependent microtubule severing proteinDDB0232431 CDS5420537 1968 + 0.269817
DDB_G0287215 DDB_G0287215 DDB0232432 CDS3070 1113 - 0.28841
DDB_G0287221 DDB_G0287221 similar to TRIP12 (thyroid hormone receptor interactor 12) a component of PA700 an ATP-dependent multisubunit protein that activates the proteolytic activities of the 20S proteasomeDDB0232432 CDS10149 6294 - 0.317445
DDB_G0287225 DDB_G0287225 DDB0232432 CDS21182 2106 + 0.195632
DDB_G0287257 DDB_G0287257 DDB0232432 CDS49910 1513 - 0.356907
DDB_G0287559 DDB_G0287559 DDB0232432 CDS419276 579 - 0.262522
DDB_G0287759 DDB_G0287759 DDB0232432 CDS662849 1140 - 0.261404
DDB_G0287793 DDB_G0287793 similar to human GSTT2 (glutathione S-transferase theta-2) glutathione transferases participate in the detoxification of reactive electrophilic compounds by catalysing their conjugation to glutathione contains a predicted peroxisomal targeting signalDDB0232432 CDS710171 669 + 0.246637
DDB_G0287811 DDB_G0287811 DDB0232432 CDS748966 309 + 0.326861
DDB_G0287847 DDB_G0287847 DDB0232432 CDS813389 2040 + 0.260294
DDB_G0287851 DDB_G0287851 DDB0232432 CDS822730 2889 + 0.317411
DDB_G0288153 DDB_G0288153 belongs to the thioredoxin family lacks redox-active cysteines compared with many homologs so may be catalytically inactiveDDB0232432 CDS1158956 327 - 0.235474
DDB_G0288221 DDB_G0288221 DDB0232432 CDS1272181 1188 + 0.313131
DDB_G0288265 DDB_G0288265 very similar to S. cerevisiae HSP10 A. thaliana CPN10 and human HSPE1 (HSP10)mitochondrial chaperoninsDDB0232432 CDS1314543 309 + 0.291262
DDB_G0288345 DDB_G0288345 DDB0232432 CDS1413915 1554 + 0.261261
DDB_G0288363 DDB_G0288363 belongs to the peptidase S8 family contains a predicted signal peptide contains one EGF-like domainDDB0232432 CDS1391586 2037 + 0.311733
DDB_G0288381 DDB_G0288381 DDB0232432 CDS1460823 1650 - 0.270303
DDB_G0288593 DDB_G0288593 DDB0232432 CDS1728286 2085 - 0.313669
DDB_G0288595 DDB_G0288595 DDB0232432 CDS1730911 1224 + 0.227124
DDB_G0288639 DDB_G0288639 conserved protein DnaJ homolog subfamily C member 7 (DNAJC7)DDB0232432 CDS1756684 1620 + 0.334568
DDB_G0288697 DDB_G0288697 DDB0232432 CDS1839851 1758 - 0.303185
DDB_G0288849 DDB_G0288849 contains a predicted signal peptide and a putative C-terminal transmembrane domain similar to S. cerevisiae ERO1 (endoplasmic oxidoreductin-1) which is required for the formation of disulfide bonds in the proteins in the endoplasmic reticulumDDB0232432 CDS2057527 1662 - 0.253309
DDB_G0288861 DDB_G0288861 DDB0232432 CDS1954614 2169 + 0.319963
DDB_G0288999_ps DDB_G0288999 putative pseudogene highly conserved family containing an alkyl hydroperoxide reductasethiol specific antioxidantmal allergen domainDDB0232432 CDS2216611 453 - 0.267108
DDB_G0289047 DDB_G0289047 highly similar to bacterial ClpB expressed in prespore cellsDDB0232432 CDS2299492 2388 - 0.348827
DDB_G0289557 DDB_G0289557 DDB0232432 CDS2946489 2328 - 0.226804
DDB_G0289991 DDB_G0289991 DDB0232432 CDS3521273 1203 - 0.284289
DDB_G0290017 DDB_G0290017 DDB0232432 CDS3543307 531 - 0.271186
DDB_G0290333 DDB_G0290333 belongs to the peptidase S53 family similar to P. polycephalum physarolisin contains a predicted signal peptideDDB0232432 CDS3973178 1797 + 0.413467
DDB_G0290433 DDB_G0290433 DDB0232432 CDS4118281 4869 - 0.326556
DDB_G0290545 DDB_G0290545 DDB0232432 CDS4245577 2238 + 0.224754
DDB_G0290547 DDB_G0290547 DDB0232432 CDS4248317 444 - 0.34009
DDB_G0290629 DDB_G0290629 DDB0232432 CDS4394537 2913 - 0.252317
DDB_G0290995 DDB_G0290995 DDB0232432 CDS4867138 909 - 0.246425
DDB_G0291191 DDB_G0291191 DDB0232432 CDS5086072 1059 - 0.367328
DDB_G0291281 DDB_G0291281 DDB0232433 CDS48286 372 + 0.282258
DDB_G0291299 DDB_G0291299 DDB0232433 CDS80308 1407 - 0.294243
DDB_G0291314 DDB_G0291314 highly similar to plant HSP101 expressed in prespore cellsDDB0232433 CDS116087 2661 + 0.34611
DDB_G0291366 DDB_G0291366 belongs to the thioredoxin family similar to A. thaliana PRXIIF (peroxiredoxin IIF) lacks redox-active cysteine compared with many homologs so may be catalytically inactiveDDB0232433 CDS184226 549 - 0.275046
DDB_G0292030 DDB_G0292030 DDB0232433 CDS1049058 1038 - 0.226397
DDB_G0292046 DDB_G0292046 DDB0232433 CDS1071921 9723 + 0.246735
DDB_G0292282 DDB_G0292282 DDB0232433 CDS1385822 1779 + 0.226532
DDB_G0292290 DDB_G0292290 DDB0232433 CDS1396696 2310 + 0.237662
DDB_G0292334 DDB_G0292334 DDB0232433 CDS1502579 2331 - 0.277134
DDB_G0292462 DDB_G0292462 DDB0232433 CDS1678244 972 + 0.322016
DDB_G0292710 DDB_G0292710 contains one PPIase cyclophilin-type domain and one RRM (RNA recognition motif) domain homolog of human PPIL4 and S. pombe cyp6 PPIase is an enzyme that accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptidesDDB0232433 CDS1995447 1470 - 0.278912
DDB_G0293122 DDB_G0293122 similar to human GSTT2 (glutathione S-transferase theta-2) glutathione transferases participate in the detoxification of reactive electrophilic compounds by catalysing their conjugation to glutathioneDDB0232433 CDS2554630 660 - 0.237879
DDB_G0293154 DDB_G0293154 this gene belongs to the trx family of genes and is located next to DDB0232433 CDS2334087 153 - 0.30719
DDB_G0293328 DDB_G0293328 DDB0232433 CDS2760211 396 + 0.39899
DDB_G0293378 DDB_G0293378 DDB0232433 CDS2818966 1650 + 0.287273
DDB_G0293388 DDB_G0293388 putative ATP-dependent metalloprotease FtsH similar to S. cerevisiae YME1 that plays a role in mitochondrial protein metabolismDDB0232433 CDS2798298 2304 - 0.327691
DDB_G0293448 DDB_G0293448 DDB0232433 CDS2875111 1431 - 0.245982
DDB_G0293508 DDB_G0293508 DDB0232433 CDS2972530 3108 + 0.287323
DDB_G0293672 DDB_G0293672 DDB0232433 CDS3242621 285 + 0.249123
DDB_G0293674 DDB_G0293674 DDB0232433 CDS3243242 1893 + 0.310618
DDB_G0293678 DDB_G0293678 DDB0232433 CDS3246808 1710 + 0.293567
DDB_G0293770 DDB_G0293770 DDB0232433 CDS3303029 6324 - 0.306293
DDB_G0294635 DDB_G0294635 DDB0232430 CDS2232590 2457 + 0.265364
DDB_G0295681 DDB_G0295681 DDB0232430 CDS32370 336 + 0.357143
DDB_G0295803 DDB_G0295803 DDB0232433 CDS1775198 486 + 0.162551
DDB_G0295811 DDB_G0295811 DDB0232430 CDS1753571 912 - 0.288377
DDB_G0304475 DDB_G0304475 DDB0232430 CDS168687 1329 + 0.320542
abcB5 DDB_G0292554 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS1786504 2094 - 0.294651
abcB6 DDB_G0282931 half transporter consisting of one ABC domain and one transmembrane domainDDB0232431 CDS9046 2037 - 0.300442
adprh DDB_G0289675 conserved enzyme catalyzes the reaction: N(omega)-(ADP-D-ribosyl)-L-arginine H(2)O ADP-ribose L-arginine reverses the reaction of mono-ADP-ribosylationDDB0232432 CDS3077727 1179 - 0.31637
ahsa DDB_G0269712 DDB0232428 CDS3388870 1152 - 0.332465
amfr DDB_G0279345 ortholog of the long isoform (isoform 2) of the human autocrine motility factor receptor a RING finger-dependent ubiquitin protein ligase (E3) of the endoplasmic reticulum that is involved in tumor invasion and metastasis contains four putative transmembrane domains and an additional signal sequenceDDB0232430 CDS1961529 2040 - 0.258824
anapc10 DDB_G0268992 component of the anaphase-promoting complexcyclosome (APCC) a cell cycle-regulated ubiquitin ligase that controls progression through the cell cycleDDB0232428 CDS2080758 567 + 0.257496
anapc11 DDB_G0286909 component of the anaphase-promoting complexcyclosome (APCC) a cell cycle-regulated ubiquitin ligase that controls progression through the cell cycleDDB0232431 CDS5059870 264 - 0.348485
ate1 DDB_G0269024 ortholog of the conserved arginine-tRNA-protein transferase ATE1 involved in the post-translational conjugation of arginine to the amino termini of acceptor proteins which are then subject to degradation via the ubiquitin pathway catalyzes rhe reaction L-arginyl-tRNA protein tRNA L-arginyl-proteinDDB0232428 CDS2333199 1890 + 0.230688
atg4-1 DDB_G0273443 ortholog of the conserved ATG4 cysteine protease involved in autophagy there is a second copy of this gene DDB0232429 CDS2936962 2238 - 0.272118
atg4-2 DDB_G0273553 ortholog of the conserved ATG4 cysteine protease involved in autophagy there is a second copy of this gene DDB0232429 CDS3092131 2238 + 0.272118
atp12 DDB_G0292678 DDB0232433 CDS1937753 993 - 0.257805
bcs1lA DDB_G0289135 conserved mitochondrial chaperone necessary for the assembly of mitochondrial respiratory chain complex III Dictyostelium has a second BCS1-like protein DDB0232432 CDS2391473 1266 + 0.304897
bcs1lB DDB_G0291910 conserved mitochondrial chaperone necessary for the assembly of mitochondrial respiratory chain complex III Dictyostelium has a second BCS1-like protein DDB0232433 CDS923283 1377 + 0.304285
cct2 DDB_G0291358 DDB0232433 CDS177191 1599 - 0.358349
cct3 DDB_G0281741 DDB0232430 CDS4903167 1593 + 0.37602
cct4 DDB_G0292872 DDB0232433 CDS2188382 1602 - 0.373908
cct5 DDB_G0281849 DDB0232430 CDS5012149 1617 + 0.343847
cct6 DDB_G0277493 DDB0232429 CDS8001157 1620 - 0.340741
cct7 DDB_G0291225 DDB0232433 CDS201367 1668 + 0.41307
cct8 DDB_G0276233 DDB0232429 CDS6265977 1614 - 0.366791
cdc6 DDB_G0275983 bCommunity annotation:b ortholog of cdc6 long known to be a critical member of the DNA pre-replication complex and more recently implicated in control of mitosis (see DDB0232429 CDS6146641 1317 + 0.247532
cdcD DDB_G0288065 highly conserved protein CDC48 in yeasts DDB0232432 CDS1118593 2382 + 0.398825
cfaD DDB_G0281605 related to cysteine protease C1A but has no detectable peptidase activity autocrine secreted factor that slows cell proliferation and thus has the properties of a chalone generates two products a 65 kDa and a 27 kDa peptideDDB0232430 CDS4701100 1596 - 0.379073
copZa DDB_G0289523 zeta subunit of the coatomer complex essential for the secretory pathway there is another gene encoding a zeta subunit DDB0232432 CDS2913451 528 - 0.242424
copZb DDB_G0293086 zeta subunit of the coatomer complex involved in intracellular protein transport there is another gene encoding a zeta subunit DDB0232433 CDS2460151 537 + 0.266294
cox10 DDB_G0288169 ortholog of COX10 which catalyzes the first step in the conversion of protoheme to the heme A prosthetic group required for cytochrome c oxidase activity contains seven transmembrane domainsDDB0232432 CDS1175200 1350 - 0.302222
cox11 DDB_G0289353 ortholog of COX11 the mitochondrial inner membrane protein required for delivering copper to subunit 1 of cytochrome c oxidase.DDB0232432 CDS2677137 939 + 0.27263
coxA DDB_G0281549 ortholog of COX15 required for the hydroxylation of heme O to form heme A a component of cytochrome c oxidaseDDB0232430 CDS4977091 1449 - 0.31539
cprA DDB_G0290957 DDB0232432 CDS4812963 1032 + 0.312984
cprB DDB_G0279799 DDB0232430 CDS2569081 1131 - 0.322723
cprC DDB_G0283867 DDB0232431 CDS1092858 1014 + 0.302761
cprE DDB_G0272815 DDB0232429 CDS2212329 1035 - 0.357488
cprH DDB_G0278401 belongs to the peptidase family C1 sub-family C1A (papain family clan CA) repressed after Legionella pneumophila infectionDDB0232430 CDS822687 1014 + 0.309665
csn1 DDB_G0283587 subunit of the COP9 signalosome (CSN) a complex of the ubiquitin-proteasome pathway composed of eight subunits (CSN1-8)DDB0232431 CDS822737 1377 - 0.284677
csn2 DDB_G0289361 subunit of the COP9 signalosome (CSN) a complex of the ubiquitin-proteasome pathway composed of eight subunits (CSN1-8)DDB0232432 CDS2705143 1350 + 0.28
culA DDB_G0291972 very similar to mammalian cullin 1 (CUL1) involved in ubiquitin-mediated protein degradation which in Dictyostelium controls PKA function and regulates cell differentiationDDB0232433 CDS977829 2313 - 0.285776
culB DDB_G0267384 similar to mammalian cullin 1 and 2 (CUL1 CUL2) involved in ubiquitin-mediated protein degradation regulates prestalk cell differentiation in DictyosteliumDDB0232428 CDS551012 2316 - 0.255613
culC DDB_G0284903 very similar to mammalian cullin 3 (CUL3) acts as scaffold for ubiquitin ligases (E3) involved in ubiquitin-mediated protein degradationDDB0232431 CDS2621558 2310 - 0.290476
culD DDB_G0292794 very similar to mammalian cullin 4 (CUL4A and CUL4B) acts as scaffold for ubiquitin ligases (E3) involved in ubiquitin-mediated protein degradationDDB0232433 CDS2047275 2409 - 0.28352
culE DDB_G0278991 similar to mammalian cullin 1 2 and 5 (CUL1 CUL2 CUL5) acts as scaffold for ubiquitin ligases (E3) involved in ubiquitin-mediated protein degradationDDB0232430 CDS1485914 2253 - 0.316467
cypB DDB_G0269120 DDB0232428 CDS3371521 594 - 0.33165
cypD DDB_G0280401 DDB0232430 CDS3316821 525 - 0.321905
cypE DDB_G0269216 cyclosporin A-sensitive peptidylprolyl cis-trans isomerase binds the SKIP ortholog snwA in a cyclosporin-independent mannerDDB0232428 CDS3461467 471 - 0.295117
ddj1 DDB_G0280037 DDB0232430 CDS3103912 1236 - 0.394013
dhps DDB_G0285725 catalyzes the first step in the formation of deoxyhypusine: [eIF5A]-lysine spermidine [eIF5A]-deoxyhypusine propane-13-diamine an essential post-translational modification only found in mature eIF5A factor the second reaction is catalyzed by Dohh DDB0232431 CDS3636502 1131 + 0.318302
dnaja1 DDB_G0291568 conserved molecular chaperone DnaJ homolog subfamily A member 1DDB0232433 CDS558877 1380 + 0.365942
dnaja5 DDB_G0286579 conserved eukaryotic protein of unknown function contains DNAJ domain and two C2H2-like Zinc finger domainsDDB0232431 CDS4649529 1902 - 0.268665
dnajc13 DDB_G0286293 very similar to the mammalian DnaJ homolog subfamily C member 13 required in D. melanogaster (Rme-8) for receptor-mediated endocytosis 8DDB0232431 CDS4307439 7779 - 0.331919
dnajc19 DDB_G0283735 putative component of the PAM complex required for the ATP-dependent translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix defects in DNAJC19 in human cause dilated cardiomyopathy with ataxia (DCMA) contains one putative N-terminal signal sequenceDDB0232431 CDS1046052 342 + 0.304094
dnajc3 DDB_G0286251 DnaJ (Hsp40) homolog subfamily C member 3 which in H. sapiens is a interferon-induced double-stranded RNA-activated protein kinase inhibitorDDB0232431 CDS4252375 1509 + 0.319417
dph4 DDB_G0292980 DDB0232433 CDS2253222 513 + 0.224172
drcA DDB_G0293840 belongs to the glutathione S-transferase superfamily catalzyes the first step in the breakdown of differentiation-inducing factor 1DDB0232433 CDS3374878 828 + 0.270531
efa1G DDB_G0282979 component of the eukaryotic translation elongation factor EF-1 which plays a role in attaching aminoacyl-tRNAs to the ribosomeDDB0232431 CDS88701 1233 + 0.400649
espl1 DDB_G0290325 caspase-like protease also called separin (ESP1) which plays a central role in sister chromosome segregation in yeastbrbr bCommunity annotation:b espl1 is highly similar to separase (aka separin) a widely-conserved peptidase which cleaves the rad21ssc1 non-SMC subunit of cohesin rings remaining at the centromere at metaphase allowing the sister chromatids to separate. Consistent with this homology espl1 is overexpressed fourfold (p6e-14) in a Dicty strain in which the retinoblastoma-like gene rblA has been disrupted. Most genes with roles in S-phase or mitosis are overexpressed in this strain and most of the overexpressed genes have identifiable cell cycle functions. espl1 also shows the developmental time course most typical of cell cycle genes.br The separase inhibitor securin conserved between yeast and humans which is broken down at the metaphaseanaphase junction under control of the spindle checkpoint is not recognizable in Dicty. Securin is also unrecognizable plants however whleDDB0232432 CDS3958340 7284 - 0.240527
fntA DDB_G0283053 catalyzes the transfer of a farnesyl group or a geranylgeranyl group via a thioether linkage (-C-S-C-) to a cysteine at or near the carboxyl terminus of the protein forms a heterodimer with the DDB0232431 CDS15565 969 - 0.28483
fntB DDB_G0270948 catalyzes the transfer of a farnesyl group or a geranylgeranyl group via a thioether linkage (-C-S-C-) to a cysteine at or near the carboxyl terminus of the protein forms a heterodimer with the DDB0232428 CDS3561059 1503 + 0.27811
fpaA DDB_G0269230 component of the SCF ubiquitin ligase complex the fpaA gene encodes a protein almost identical to that of fpaB differing in one amino acid only series of glycosylation reactions attaches a pentasaccharide chain to HyPro143DDB0232428 CDS3989908 489 - 0.329243
fpaB-1 DDB_G0273251 component of the SCF ubiquitin ligase complex the fpaB gene encodes a protein almost identical to that of fpaA differing in one amino acid only series of glycosylation reactions attaches a pentasaccharide chain to HyPro143 there is a second copy of this gene DDB0232429 CDS2857157 489 - 0.331288
fpaB-2 DDB_G0273615 component of the SCF ubiquitin ligase complex the fpaB gene encodes a protein almost identical to that of fpaA differing in one amino acid only series of glycosylation reactions attaches a pentasaccharide chain to HyPro143 there is a second copy of this gene DDB0232429 CDS3173987 489 + 0.331288
gmsA DDB_G0286015 homologous to the Chlamydomonas reinhardtii a2gene enriched in gametesDDB0232431 CDS3951359 1347 - 0.368226
grp94 DDB_G0280057 DDB0232430 CDS3124645 2304 - 0.320312
grpE DDB_G0283763 similar to S. cerevisiae MGE1 and H. sapiens GrpE involved in protein import into mitochondriaDDB0232431 CDS1238328 642 - 0.302181
grxA DDB_G0290015 DDB0232432 CDS3542247 303 - 0.290429
hfnA DDB_G0283983 contains an N-terminal filaminABP280 repeat and a C-terminal HECT (Homologous to the E6-AP Carboxyl Terminus) domain the latter common in ubiquitin ligasesDDB0232431 CDS1259472 3363 + 0.223313
hspA DDB_G0288181 involved in phototaxis growth and morphogenesis and implicated in mitochondrial diseaseDDB0232432 CDS1238068 1671 + 0.36146
hspB DDB_G0269144 DDB0232428 CDS4410084 1923 - 0.334893
hspD DDB_G0267400 DDB0232428 CDS1280990 2103 - 0.336662
hspE-1 DDB_G0273249 there is a second copy of this gene DDB0232429 CDS2848730 1899 - 0.410742
hspE-2 DDB_G0273623 there is a second copy of this gene DDB0232429 CDS3181158 1899 + 0.410742
hspF-1 DDB_G0273409 there is a second copy of this gene DDB0232429 CDS2921093 702 - 0.237892
hspF-2 DDB_G0273561 there is a second copy of this gene DDB0232429 CDS3109992 702 + 0.237892
hspG1 DDB_G0275079 DDB0232429 CDS5147676 549 - 0.20765
hspG10 DDB_G0277123 DDB0232429 CDS7585241 225 + 0.24
hspG11 DDB_G0277125 DDB0232429 CDS7588267 333 + 0.252252
hspG12 DDB_G0277491 DDB0232429 CDS7996971 618 - 0.223301
hspG2 DDB_G0276003 DDB0232429 CDS6164176 603 + 0.215589
hspG3 DDB_G0276607 DDB0232429 CDS7032092 684 + 0.238304
hspG4 DDB_G0276587 DDB0232429 CDS7028602 600 + 0.218333
hspG5 DDB_G0276875 DDB0232429 CDS7572576 609 + 0.231527
hspG6 DDB_G0276949 DDB0232429 CDS7574080 633 + 0.227488
hspG7 DDB_G0276951 DDB0232429 CDS7575967 624 + 0.24359
hspG8 DDB_G0277119 DDB0232429 CDS7578926 636 + 0.243711
hspG9 DDB_G0276953 DDB0232429 CDS7581914 606 + 0.234323
hspH DDB_G0290187 DDB0232432 CDS3818443 2319 + 0.378611
hspI DDB_G0288921 DDB0232432 CDS2124478 672 - 0.258929
hspJ DDB_G0279447 DDB0232430 CDS2061353 486 - 0.17284
hspK DDB_G0275525 DDB0232429 CDS5922492 540 - 0.3
hspL DDB_G0267668 DDB0232428 CDS537016 399 + 0.263158
hspM DDB_G0280013 DDB0232430 CDS2706627 480 + 0.1875
hsp_ps DDB_G0281581 putative pseudogene similar to a gene family in Dictyostelium including DDB0232430 CDS4662931 357 + 0.291317
icmA-1 DDB_G0272799 prenylcysteine methyltransferase carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif such as NE81 (lmnB) there is a second copy of this gene DDB0232429 CDS2383418 714 - 0.303922
icmA-2 DDB_G0273995 carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif such as NE81 (lmnB) there is a second copy of this gene DDB0232429 CDS3647566 714 + 0.303922
impA DDB_G0285455 highly similar to FKBP-type peptidyl-prolyl isomerase which functions as a receptor for immunosuppressants in vertebrates the impA promoter is shared with and inversely regulated with dia1 during the growth-development transitionDDB0232431 CDS3249271 585 + 0.324786
limB DDB_G0284863 DDB0232431 CDS2691906 1662 + 0.353791
maf1 DDB_G0278673 negative regulator of RNA polymerase III homolog of H. sapiens and S. cerevisiae MAF1DDB0232430 CDS788140 837 - 0.259259
mai DDB_G0278155 catalyzes the reaction 4-maleylacetoacetate 4-fumarylacetoacetateDDB0232430 CDS376116 660 + 0.319697
mbtps1 DDB_G0282397 ortholog of H. sapiens MBTPS1 which catalyzes the first step in the proteolytic activation of sterol regulatory element-binding proteins (SREBPs)DDB0232430 CDS5699822 3996 - 0.287788
mhsp70 DDB_G0293298 DDB0232433 CDS2761673 1977 + 0.376834
msrA DDB_G0276579 catalyzes the reaction L-methionine thioredoxin disulfide H2O L-methionine (S)-S-oxide thioredoxin functions as a repair enzyme for proteins that have been inactivated by oxidationDDB0232429 CDS7002973 492 - 0.325203
msrB DDB_G0291145 catalyzes the reaction L-methionine oxidized thioredoxin L-methionine R-oxide reduced thioredoxinDDB0232432 CDS5047547 573 + 0.267016
nfu1 DDB_G0285593 ortholog of S. cerevisiae NFU1 involved in iron metabolism in mitochondriaDDB0232431 CDS3425659 945 - 0.238095
nosA DDB_G0292264 DDB0232433 CDS1472850 3270 - 0.284404
nsfA DDB_G0276153 ATPase required for endocytosis membrane trafficking and cell motility acts as a SNAP receptor (SNARE) chaperone which binds through soluble NSF attachment proteins (SNAPs) to SNARE complexes and utilizes the energy of ATP hydrolysis to promote SNARE recyclingDDB0232429 CDS6318754 2217 + 0.345963
nup160 DDB_G0269502 component of the nuclear pore complex which plays a role in RNA exportDDB0232428 CDS2888658 5376 + 0.232887
nvl DDB_G0282181 DDB0232430 CDS5443128 2604 - 0.300307
orcA DDB_G0283073 DNA replication initiation is driven by a conserved six protein complex the origin recognition complex (ORC) has a role in both chromosomal replication and mating type transcriptional silencingDDB0232431 CDS182130 1896 - 0.2827
orcD DDB_G0271562 DNA replication initiation is driven by a conserved six protein complex the origin recognition complex (ORC) has a role in both chromosomal replication and mating type transcriptional silencingDDB0232429 CDS681736 1323 + 0.226757
pcmA DDB_G0280979 similar to PIMT or PCMT (L-isoaspartylD-aspartyl protein carboxyl methyltransferase or protein-L-isoaspartate (D-aspartate) O-methyltransferase)DDB0232430 CDS4356442 951 + 0.287066
pdi1 DDB_G0276141 DDB0232429 CDS6548168 1092 + 0.369048
pdi2 DDB_G0291434 DDB0232433 CDS299936 1542 - 0.33463
pex1 DDB_G0289867 ortholog of peroxin 1 AAA-family ATPase peroxin required for peroxisome biogenesis mutations in human homolog cause a variety of peroxisomal disordersDDB0232432 CDS3340420 3684 + 0.253529
pex4 DDB_G0274313 ortholog of peroxin 4 a peroxisomal ubiquitin conjugating enzyme required for peroxisomal matrix protein import and peroxisome biogenesisDDB0232429 CDS3939967 450 - 0.291111
pex6 DDB_G0292788 ortholog of peroxin 6 required for peroxisome biogenesis mutations in human homolog cause a variety of peroxisomal disordersDDB0232433 CDS2034271 3606 - 0.22518
pfdn1 DDB_G0287827 DDB0232432 CDS772980 348 - 0.238506
pfdn5 DDB_G0280607 DDB0232430 CDS3564619 483 + 0.287785
pfdn6 DDB_G0286147 DDB0232431 CDS4132037 423 + 0.255319
pggt1b DDB_G0269726 catalyzes the reaction geranylgeranyl diphosphate protein-cysteine S-geranylgeranyl-protein diphosphateDDB0232428 CDS3425762 1059 - 0.316336
pgpep DDB_G0267498 DDB0232428 CDS226283 624 + 0.241987
phbA DDB_G0290123 ortholog of the yeast Phb1p and other prohibitins that are inner mitochondrial membrane chaperones that stabilize newly synthesized proteins also suggested to play a role in cell senescenceDDB0232432 CDS3692217 816 - 0.300245
phbB DDB_G0284117 ortholog of the yeast Phb2p and other prohibitins that are inner mitochondrial membrane chaperones that stabilize newly synthesized proteins also suggested to play a role in cell senescenceDDB0232431 CDS1608856 882 + 0.290249
phlp2 DDB_G0285433 DDB0232431 CDS3253005 720 + 0.297222
phlp3 DDB_G0293848 DDB0232433 CDS3411418 555 - 0.257658
phyA DDB_G0277759 catalyzes the hydroxylation of Proline 143 of the Skp1 protein (FpaAFpaB)DDB0232429 CDS8457984 855 + 0.211696
pigK DDB_G0285461 DDB0232431 CDS3257355 1341 - 0.266219
pinA DDB_G0268618 DDB0232428 CDS1957162 807 - 0.313507
ppiA DDB_G0282359 DDB0232430 CDS5684660 540 + 0.409259
ppiD DDB_G0283663 ortholog of the mammalian PPID peptidyl-prolyl cis-trans isomerase (PPIase) accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptidesDDB0232431 CDS943186 1065 + 0.293897
ppiH DDB_G0274281 highly similar to human PPIH a snRNP-associated protein which interacts with PRP4DDB0232429 CDS4043724 606 + 0.30198
ppil2 DDB_G0284323 DDB0232431 CDS1783122 1845 + 0.266125
ppil3 DDB_G0291734 DDB0232433 CDS672553 486 - 0.281893
ppwd1 DDB_G0269054 conserved peptidyl-prolyl isomerase and WD repeat-containing protein that might be involved in pre-mRNA processing peptidyl-prolyl cis-trans isomerase (PPIase) accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptidesDDB0232428 CDS1931476 1908 + 0.28826
prdx4 DDB_G0274859 expressed in prespore cells ortholog of peroxiredoxin 4 catalyzes the reaction reduced thioredoxin Hsub2subOsub2sub oxidized thioredoxin Hsub2subODDB0232429 CDS4213176 1398 + 0.360515
prdx5 DDB_G0285741 DDB0232431 CDS3255042 519 + 0.358382
prtA DDB_G0271696 DDB0232429 CDS741000 1536 - 0.288411
psmA1 DDB_G0282363 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring) suppressor of tagB-stb10DDB0232430 CDS5739737 747 - 0.309237
psmA2 DDB_G0292122 subunit of an endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232433 CDS1227398 699 + 0.317597
psmA3 DDB_G0267408 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232428 CDS277655 747 - 0.323963
psmA4 DDB_G0280969 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232430 CDS4147505 753 - 0.335989
psmA5 DDB_G0268538 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232428 CDS1022895 726 + 0.331956
psmA6 DDB_G0278847 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232430 CDS1274786 753 + 0.330677
psmA7 DDB_G0272831 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232429 CDS2102038 753 - 0.321381
psmB1 DDB_G0272969 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232429 CDS1952612 711 - 0.322082
psmB2 DDB_G0269472 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232428 CDS2839118 597 + 0.304858
psmB3 DDB_G0269772 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232428 CDS3525818 618 + 0.317152
psmB4-1 DDB_G0273163 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring) there is a second copy of this gene DDB0232429 CDS2482779 780 + 0.303846
psmB4-2 DDB_G0273909 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring) there is a second copy of this gene DDB0232429 CDS3547766 780 - 0.303846
psmB5 DDB_G0293784 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232433 CDS3275662 819 - 0.328449
psmB6 DDB_G0267390 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring) shift of Dictyostelium cells from the proliferative to differentiated state highly expressed during the early stage of differentiationDDB0232428 CDS487456 645 - 0.339535
psmB7 DDB_G0283679 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232431 CDS967091 801 - 0.340824
psmC1 DDB_G0270784 ATPase subunit and regulatory subcomplex of the 26S proteasome TAT binding protein homolog involved in growth and morphogenesisDDB0232428 CDS4684536 1320 - 0.37197
psmC2 DDB_G0276917 DDB0232429 CDS7234040 1287 - 0.367521
psmC3 DDB_G0284415 DDB0232431 CDS1968066 1266 + 0.347551
psmC4 DDB_G0289003 ATPase subunit and regulatory subcomplex of the 26S proteasome developmentally regulated TAT binding protein homologDDB0232432 CDS2227887 1212 + 0.326733
psmC5 DDB_G0292382 ATPase subunit and regulatory subcomplex of the 26S proteasome developmentally regulated TAT binding protein homologDDB0232433 CDS1673522 1212 - 0.334158
psmC6 DDB_G0284517 DDB0232431 CDS2090141 1182 + 0.335871
psmD1 DDB_G0287953 DDB0232432 CDS881632 2928 - 0.35929
psmD11 DDB_G0281315 DDB0232430 CDS4153223 1242 + 0.274557
psmD12 DDB_G0281051 DDB0232430 CDS3979792 1344 + 0.284226
psmD2 DDB_G0293752 DDB0232433 CDS3279468 2682 + 0.346383
psmD4 DDB_G0275775 contains one von Willebrand factor type A (VWFA) domain and two ubiquitin interacting motifsDDB0232429 CDS5689186 1050 + 0.32381
psmD6 DDB_G0270188 DDB0232428 CDS4382128 1149 + 0.278503
rabggta DDB_G0269570 catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC -XCXC and -CCXX C-terminal forms a hetero-dimer with the DDB0232428 CDS3019090 936 + 0.244658
rabggtb DDB_G0290671 catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC -XCXC and -CCXX C-terminal forms a hetero-dimer with the DDB0232432 CDS4317912 1020 + 0.281373
rad6 DDB_G0275787 RAD6 homolog an E2 ubiquitin-conjugating enzyme involved in postreplication repair forms a heterodimer with RAD18DDB0232429 CDS5646909 456 + 0.350877
rbx1 DDB_G0287629 DDB0232432 CDS496993 315 + 0.342857
rcaA DDB_G0272120 DDB0232429 CDS1622396 2535 - 0.341617
spyA DDB_G0285263 CAZy family GT41 contains 7 TPRs (Tetratrico Peptide Repeats)DDB0232431 CDS3029506 2595 - 0.246243
sumo DDB_G0286189 sumoylates the MAP kinase kinase Mek1 (mekA) sumoylation is involved in cellular translocation after cAMP stimulation and activation of the kinaseDDB0232431 CDS4217038 297 + 0.356902
tbcD DDB_G0268516 DDB0232428 CDS802089 4443 + 0.238352
tcp1 DDB_G0269190 DDB0232428 CDS4885046 1647 + 0.364299
timm22 DDB_G0283865 DDB0232431 CDS1077530 537 - 0.340782
tpp1 DDB_G0269914 ortholog of CLN2TPP1 contains a predicted signal peptide enriched in prespore cellsDDB0232428 CDS3852049 1803 - 0.32335
trap1 DDB_G0276947 similar to metazoan TRAP1 member of the HSP90 family translocates to mitochondria during the prestarvation responseDDB0232429 CDS7541980 2136 + 0.309457
trrA DDB_G0280815 catalyzes the reaction thioredoxin NADP thioredoxin disulfide NADPH HDDB0232430 CDS3775563 960 - 0.377083
trxC DDB_G0294489 small disulphide-containing redox protein that serves as a general protein disulphide oxidoreductase up-regulated at 6 hr developmental stageDDB0232433 CDS2335005 315 - 0.32381
trxD DDB_G0287849 DDB0232432 CDS820586 315 - 0.260317
trxE DDB_G0287227 DDB0232432 CDS23737 318 + 0.393082
txnl4a DDB_G0275407 DDB0232429 CDS5420626 426 - 0.300469
ubc9 DDB_G0287693 DDB0232432 CDS688286 480 - 0.33125
ubcB DDB_G0284865 high similarity to E2ubiquitin-conjugating enzymes from yeast metazoans and plants ubiquitin-conjugating enzymes (EC: 6.3.2.19) (UBC or E2 enzymes) catalyze the covalent attachment of ubiquitin to target proteinsDDB0232431 CDS2571519 447 - 0.340045
ubcC DDB_G0284009 DDB0232431 CDS1428069 708 + 0.310734
ube2c DDB_G0278775 putative ortholog of S. pombe ubc11 and H. sapiens UBE2C involved in the destruction of cyclins during mitosisbrbr bCommunity annotation:b A role of this gene in cell cycle progression is supported by its sevenfold overexpression in a Dicty strain lacking the Dicty retinoblastoma like gene DDB0232430 CDS1152307 462 + 0.30303
ube2m DDB_G0281725 DDB0232430 CDS4883727 693 + 0.314574
ube2n DDB_G0277267 DDB0232429 CDS7854255 465 + 0.344086
ube2s DDB_G0289021 DDB0232432 CDS2250572 648 + 0.290123
ube2t DDB_G0291199 interacts with the Fanconi anaemia complex involved DNA cross-link repair null mutant is sensitive to DNA damaging agents brbr the mammalian Fanconi anaemia nuclear complex includes FANC A B C E F G L and M the FA complex interacts with ube2t a E2 ubiquitin-conjugating enzyme to monoubiquitinate FANCD2 and FANCI. Ubiquinated FANCD2 and FANCI form a complex that colocalizes at sites of DNA damage with the FANCJ helicase as well as FANCN and FANCD1 Dictyostelium has orthologs for DDB0232432 CDS5123925 879 - 0.246871
ube2v DDB_G0292596 DDB0232433 CDS1823383 417 - 0.290168
ube2w DDB_G0268938 conserved E2 ubiquitin-conjugating protein which catalyzes the covalent attachment of ubiquitin to other proteinsDDB0232428 CDS1961102 450 + 0.317778
ube3a DDB_G0290179 DDB0232432 CDS3742663 2163 - 0.273694
ubpA DDB_G0291239 DDB0232433 CDS283328 2514 + 0.333731
ubpB DDB_G0275021 ubiquitin carboxyl-terminal hydrolase shown to deubiquinate mkkA putative ortholog of H. sapiens USP10DDB0232429 CDS5178139 1356 + 0.286136
uduE DDB_G0277099 upregulated in the uninfected DDB0232429 CDS7502309 294 - 0.227891
ufd1 DDB_G0271122 similar to S. cerevisiae UDF1 together with npl4 and cdcD involved in recognition of polyubiquitinated proteins and their presentation to the 26S proteasome for degradation DDB0232429 CDS33552 993 - 0.288016
urm1 DDB_G0283737 homolog of human and S. cerevisiae URM1 yeast URM1 is involved in tRNA modification and is alsoindirectly involved in oxidative stress response and regulation of budding and haploid invasive growthDDB0232431 CDS1046828 291 - 0.261168
usp12 DDB_G0290453 DDB0232432 CDS4071585 1428 - 0.226891
usp14 DDB_G0271264 DDB0232429 CDS183660 1539 + 0.302794
usp39 DDB_G0278929 similar to Arabidopsis thaliana ubiquitin carboxyl-terminal hydrolase family protein ortholog of yeast SAD1 which plays a role in pre-mRNA splicingDDB0232430 CDS1417023 2157 + 0.236439
usp40 DDB_G0289611 DDB0232432 CDS3021100 5034 - 0.283472
usp7 DDB_G0276443 DDB0232429 CDS6959828 3921 - 0.263453
v4-7 DDB_G0281823 DDB0232430 CDS5023432 2109 - 0.373637
vacA DDB_G0289485 DDB0232432 CDS2888908 1797 + 0.341681
vacB DDB_G0279191 marker of the post-lysosomal vacuole plays a role late in the endocytic pathway may target the vacuole for exocytosisDDB0232430 CDS1911215 1779 + 0.323215
vacC DDB_G0279307 very similar to Dictyostelium vacuolin A and BDDB0232430 CDS1908644 1761 + 0.319137
vps4 DDB_G0284347 DDB0232431 CDS1865073 1335 + 0.326592
yod1 DDB_G0271346 DDB0232429 CDS66274 978 + 0.284254
zmpste24 DDB_G0290849 proteolytically removes the C-terminal three residues of farnesylated proteins contains 6 putative transmembrane domains and an additional signal peptideDDB0232432 CDS4673270 1281 - 0.251366