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2024-05-19 16:48:40

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Polysphondylium pallidum, PN500

Number of genes found: 356

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
dph5 PPL_02612 ortholog to the conserved DPH5 a methyltransferase which in S. cerevisiae is required for synthesis of diphthamide a modified histidine residue of translation elongation factor 2DPPA0090b03.f1-3_y_part1 CDS112605 867 - 0.429066
g10006 PPL_13587 EXOLTKG01B86TH-3_part2 CDS323052 393 - 0.458015
g1001 PPL_01164 catalyzes the reaction ATP L-asparagine tRNAAsn AMP diphosphate L-asparaginyl-tRNAAsn similar to bacterial Asn-tRNA-ligasesDPPA0061d07.r1-5 CDS864690 1488 + 0.389113
g10018 PPL_10544 EXOLTKG01B86TH-3_part2 CDS360080 1596 + 0.399123
g10030 PPL_10557 EXOLTKG01B86TH-3_part2 CDS423155 2085 - 0.398082
g1006 PPL_01169 DPPA0061d07.r1-5 CDS879450 1593 + 0.411802
g10061 PPL_10592 EXOLTKG01B86TH-3_part2 CDS509293 2106 + 0.390788
g10068 PPL_10600 EXOLTKG01B86TH-3_part2 CDS526577 1662 - 0.478339
g10084 PPL_10615 40S ribosomal protein SA (p40) homolog belongs to the ribosomal protein S2P family contains ribosomal protein S2 domainEXOLTKG01B86TH-3_part2 CDS571248 741 - 0.493927
g10148 PPL_10677 EXOLTKG01B86TH-3_part2 CDS763921 330 - 0.554545
g10173 PPL_10708 EXOLTKG01B86TH-3_part2 CDS856360 1620 - 0.443827
g10214 PPL_10756 EXOLTKG01B86TH-3y_part1 CDS45672 3327 + 0.400962
g10278 PPL_10827 EXOLTKG01B86TH-3y_part1 CDS274476 1392 - 0.306034
g10375 PPL_10931 EXOLTKG01B86TH-3y_part2 CDS53266 2256 - 0.477837
g10434 PPL_10990 EXOLTKG02GJRTE-5 CDS106230 5679 + 0.412397
g10435 PPL_10991 ortholog of the mammalian C15orf15 gene and the S. cerevisiae RLP24 protein which is involved in the biogenesis of the 60S ribosomal subunit and at the end of biogenesis is likely to be exchanged for its ribosomal homologue rpl24EXOLTKG02GJRTE-5 CDS112654 465 - 0.389247
g10495 PPL_11075 EXOLTKG02GJRTE-5 CDS302732 1944 - 0.417695
g1056 PPL_01228 DPPA0061d07.r1-5 CDS1016289 4956 - 0.355125
g10618 PPL_11203 PN500-F-W-a08d11.p658-5_part2 CDS150471 447 - 0.472036
g10628 PPL_11212 PN500-F-W-a08d11.p658-5_part2 CDS171756 582 + 0.487972
g10633 PPL_11219 PN500-F-W-a08d11.p658-5_part2 CDS184986 456 - 0.504386
g10634 PPL_11220 PN500-F-W-a08d11.p658-5_part2 CDS187826 492 + 0.506098
g10637 PPL_11223 PN500-F-W-a08d11.p658-5_part2 CDS196565 1314 - 0.347032
g10647 PPL_11233 PN500-F-W-a08d11.p658-5_part2 CDS230916 1173 - 0.458653
g10675 PPL_11267 PN500-F-W-a08d11.p658-5_part2 CDS298512 1749 - 0.352773
g10718 PPL_11311 catalyzes the reaction ATP L-glutamate tRNAGlu AMP diphosphate L-glutamyl-tRNAGluPN500-F-W-a08d11.p658-5_part2 CDS431463 1722 - 0.373984
g10720 PPL_11313 catalyzes the reaction L-asparagine Hsub2subO L-aspartate NHsub3subPN500-F-W-a08d11.p658-5_part2 CDS434816 1251 - 0.434053
g10728 PPL_11321 PN500-F-W-a08d11.p658-5_part2 CDS459158 1443 + 0.354816
g10929 PPL_11677 PN500-G-d-22a07.f1-5 CDS7253 642 + 0.359813
g10941 PPL_11687 PN500-G-d-37g01.f1-5 CDS10949 2517 - 0.470799
g11015 PPL_11763 PN500-G-d-72b01.r1-5 CDS68191 1083 + 0.353647
g11020 PPL_11771 PN500-G-d-72b01.r1-5 CDS88930 714 - 0.417367
g11030 PPL_11782 PN500-G-d-72b01.r1-5 CDS123849 351 - 0.441595
g11042 PPL_11794 PN500-G-d-72b01.r1-5 CDS161609 1302 - 0.296467
g11054 PPL_11809 EIF1SUI1 ortholog the eukaryotic initiation factor 1 involved in recognition of the initiator codonPN500-G-d-72b01.r1-5 CDS196540 336 - 0.357143
g1107 PPL_01287 DPPA0061d07.r1-5 CDS1182276 1149 + 0.360313
g11100 PPL_13675 catalyzes the reaction ATP L-serine tRNASer AMP diphosphate L-seryl-tRNASerPN500-G-d-72b01.r1-5 CDS346392 1470 + 0.417687
g11149 PPL_11907 PN500-G-d-72b01.r1-5 CDS478236 321 + 0.46729
g11175 PPL_13682 similar to S. cerevisiae pus3 which introduces pseudouridines at position 38 or 39 in tRNAPN500-G-d-72b01.r1-5 CDS543678 645 + 0.316279
g11178 PPL_11936 similar to human EXOSC6 and S. pombe mtr3 which are components of the exosome a 3'-5' exoribonuclease complex involved in RNA processingPN500-G-d-72b01.r1-5 CDS551309 900 - 0.376667
g11184 PPL_11943 PN500-G-d-72b01.r1-5 CDS568206 3234 + 0.475572
g11187 PPL_11946 PN500-G-d-72b01.r1-5 CDS576172 660 + 0.351515
g11243 PPL_11999 PN500-G-d-72b01.r1-5 CDS723266 1146 - 0.417976
g1125 PPL_01307 DPPA0061d07.r1-5 CDS1224760 4881 - 0.366523
g11284 PPL_11547 PN500-G-d-188d09.r1-5 CDS17340 1179 + 0.364716
g1134 PPL_01317 DPPA0061d07.r1-5 CDS1251641 492 + 0.477642
g11346 PPL_11616 protein component of the small (40S) ribosomal subunit ribosomal protein S23 homologPN500-G-d-188d09.r1-5 CDS184197 588 + 0.442177
g11399 PPL_00025 contig_new08661_1.exp-5 CDS69296 1548 + 0.372739
g116 PPL_00213 DPPA0004F08.r1-5_part2 CDS335057 2250 - 0.430667
g117 PPL_00214 EIF2S2 ortholog the eukaryotic initiation factor 2 beta subunit in human binds to the 40S ribosome and to the mRNA for form a preinitiation complex complex composed of 3 subunitsDPPA0004F08.r1-5_part2 CDS337859 972 + 0.419753
g1173 PPL_01374 DPPA0090b03.f1-3_x_part1 CDS74964 2463 + 0.421843
g1186 PPL_01390 DPPA0090b03.f1-3_x_part1 CDS111988 2568 - 0.339174
g1196 PPL_01402 DPPA0090b03.f1-3_x_part2 CDS26704 1263 - 0.410135
g1247 PPL_01456 DPPA0090b03.f1-3_x_part2 CDS184284 357 - 0.467787
g1286 PPL_01496 EIF2S1 ortholog the eukaryotic initiation factor 2 alpha subunit in human binds to the 40S ribosome and to the mRNA for form a preinitiation complex contains an S1 RNA-binding domain characteristic of eIF2alphaDPPA0090b03.f1-3_x_part2 CDS306259 972 - 0.406379
g1328 PPL_12804 DPPA0090b03.f1-3_x_part3 CDS50693 1218 - 0.318555
g1332 PPL_01542 DPPA0090b03.f1-3_x_part3 CDS58367 1134 + 0.42769
g1353 PPL_01564 DPPA0090b03.f1-3_x_part3 CDS109147 1785 - 0.341737
g1403 PPL_01619 DPPA0090b03.f1-3_x_part3 CDS261674 762 - 0.452756
g1408 PPL_01624 DPPA0090b03.f1-3_x_part3 CDS273875 732 - 0.52459
g1414 PPL_01629 DPPA0090b03.f1-3_x_part3 CDS284044 3180 - 0.477987
g1417 PPL_01632 DPPA0090b03.f1-3_x_part3 CDS293366 1299 + 0.314088
g1421 PPL_12817 DPPA0090b03.f1-3_x_part3 CDS305213 3411 - 0.388742
g143 PPL_00245 DPPA0004F08.r1-5_part2 CDS403171 771 - 0.440986
g1439 PPL_01659 similar to eukaryotic initiation factor 4A isoform 3DPPA0090b03.f1-3_x_part3 CDS357426 1407 - 0.380952
g1448 PPL_01668 DPPA0090b03.f1-3_x_part3 CDS379622 708 + 0.353107
g1463 PPL_12822 elongation factor 1 alpha one of two genes coding for the same protein binds and bundles F-actinDPPA0090b03.f1-3_x_part3 CDS422238 1359 - 0.499632
g1500 PPL_01729 DPPA0090b03.f1-3_x_part3 CDS532356 2778 + 0.348812
g1511 PPL_01739 DPPA0090b03.f1-3_x_part3 CDS561287 1533 - 0.415525
g1524 PPL_01753 catalyzes the reaction ATP L-aspartate tRNAAsp AMP diphosphate L-aspartyl-tRNAAspDPPA0090b03.f1-3_x_part3 CDS599254 2127 - 0.435355
g1590 PPL_01824 DPPA0090b03.f1-3_x_part3 CDS772997 1275 + 0.357647
g166 PPL_00268 DPPA0004F08.r1-5_part2 CDS460530 624 - 0.487179
g1808 PPL_02049 DPPA0090b03.f1-3_x_part3 CDS1379378 639 - 0.386541
g1829 PPL_02075 DPPA0090b03.f1-3_x_part3 CDS1444784 1500 - 0.339333
g1884 PPL_02139 DPPA0090b03.f1-3_x_part3 CDS1631664 3357 + 0.406911
g1921 PPL_02177 DPPA0090b03.f1-3_x_part3 CDS1751678 465 + 0.460215
g1925 PPL_02181 DPPA0090b03.f1-3_x_part3 CDS1759139 669 - 0.38565
g1961 PPL_02220 DPPA0090b03.f1-3_x_part3 CDS1862223 561 - 0.351159
g2086 PPL_02356 DPPA0090b03.f1-3_x_part3 CDS2231539 2316 + 0.408895
g21 PPL_00101 DPPA0004F08.r1-5_part2 CDS55576 2052 + 0.361598
g2104 PPL_02379 DPPA0090b03.f1-3_x_part3 CDS2278450 1230 - 0.445528
g2116 PPL_12918 DPPA0090b03.f1-3_x_part3 CDS2303585 864 - 0.320602
g2119 PPL_02392 catalyzes the reaction GTP alpha-D-mannose 1-phosphate diphosphate GDP-mannoseDPPA0090b03.f1-3_x_part3 CDS2308702 1239 - 0.378531
g2133 PPL_02408 DPPA0090b03.f1-3_x_part3 CDS2357259 270 - 0.462963
g2177 PPL_02462 DPPA0090b03.f1-3_x_part4 CDS54192 1446 - 0.457815
g2184 PPL_02471 DPPA0090b03.f1-3_x_part4 CDS73601 1155 - 0.498701
g2185 PPL_02472 DPPA0090b03.f1-3_x_part4 CDS76215 618 + 0.365696
g2374 PPL_02680 DPPA0090b03.f1-3_y_part1 CDS277447 1818 + 0.39879
g2391 PPL_02697 EIF4E ortholog the eukaryotic initiation factor 4E recognizes and binds the RNA cap during protein synthesisDPPA0090b03.f1-3_y_part1 CDS330066 774 - 0.386305
g2403 PPL_02709 DPPA0090b03.f1-3_y_part1 CDS352780 1998 - 0.296296
g2416 PPL_02726 ortholog of H. sapiens DDX52 and S. cerevisiae ROK1 (Rescuer Of Kem1) ROK1 required for 18S rRNA synthesisDPPA0090b03.f1-3_y_part1 CDS392904 2115 - 0.344208
g2491 PPL_02809 DPPA0090b03.f1-3_y_part1 CDS605591 2352 + 0.477891
g2498 PPL_02815 DPPA0090b03.f1-3_y_part1 CDS621173 3768 - 0.436571
g255 PPL_00363 DPPA0004F08.r1-5_part2 CDS744498 459 - 0.46841
g2614 PPL_12968 DPPA0090b03.f1-3_y_part1 CDS917312 1029 + 0.386783
g2767 PPL_03116 DPPA0090b03.f1-3_y_part1 CDS1369595 1584 - 0.339015
g2769 PPL_03118 DPPA0090b03.f1-3_y_part1 CDS1374515 783 - 0.471264
g2785 PPL_03137 DPPA0090b03.f1-3_y_part1 CDS1407761 696 - 0.385057
g2804 PPL_03158 DPPA0090b03.f1-3_y_part1 CDS1471034 426 - 0.453052
g2846 PPL_03199 DPPA0090b03.f1-3_y_part1 CDS1580353 732 - 0.389344
g2867 PPL_03222 DPPA0090b03.f1-3_y_part1 CDS1631573 516 + 0.513566
g2922 PPL_03279 DPPA0090b03.f1-3_y_part1 CDS1778202 972 - 0.371399
g2925 PPL_03283 DPPA0090b03.f1-3_y_part1 CDS1783642 885 - 0.428249
g2985 PPL_13014 catalyzes the reaction ATP L-tryptophan tRNATrp AMP diphosphate L-tryptophan-tRNAThr similar to bacterial tryptophan-tRNA ligasesDPPA0090b03.f1-3_y_part1 CDS1948131 1224 - 0.372549
g3006 PPL_03371 DPPA0090b03.f1-3_y_part1 CDS2004012 519 - 0.466281
g3061 PPL_03432 DPPA0090b03.f1-3_y_part1 CDS2150077 714 + 0.358543
g3093 PPL_03472 DPPA0090b03.f1-3_y_part1 CDS2250103 1392 - 0.353448
g3105 PPL_03484 catalyzes the reaction ATP L-glutamyl-tRNA(Gln) L-glutamine ADP phosphate L-glutaminyl-tRNA(Gln) L-glutamateDPPA0090b03.f1-3_y_part1 CDS2274297 1635 - 0.368196
g3158 PPL_03580 DPPA0255d09.f1-5 CDS96809 1689 - 0.490231
g3170 PPL_03594 DPPA0255d09.f1-5 CDS128172 1494 + 0.447791
g320 PPL_00432 DPPA0004F08.r1-5_part2 CDS926407 459 + 0.474946
g3202 PPL_03627 DPPA0255d09.f1-5 CDS222688 855 - 0.449123
g321 PPL_00433 DPPA0004F08.r1-5_part2 CDS927334 2187 + 0.404664
g3237 PPL_03674 DPPB0337b12.r1-5 CDS68868 2373 - 0.435314
g3251 PPL_03689 DPPB0337b12.r1-5 CDS106227 2013 - 0.448087
g3270 PPL_03709 DPPB0337b12.r1-5 CDS164996 1176 - 0.357143
g3273 PPL_03712 catalyzes the reaction ATP L-histidine tRNAHis AMP diphosphate L-histidyl-tRNAHisDPPB0337b12.r1-5 CDS172470 1530 + 0.453595
g3278 PPL_03716 protein component of the small (40S) ribosomal subunit expressed in vegetative cells and in prestalk cells during culminationDPPB0337b12.r1-5 CDS182166 807 + 0.531599
g3327 PPL_03768 DPPB0337b12.r1-5 CDS309109 1926 + 0.457425
g3378 PPL_03827 DPPB0337b12.r1-5 CDS458046 432 + 0.430556
g3421 PPL_03881 DPPB0337b12.r1-5 CDS553963 1947 + 0.38983
g3440 PPL_03900 DPPB0337b12.r1-5 CDS624095 1059 + 0.461756
g3474 PPL_03934 DPPB0337b12.r1-5 CDS707656 447 - 0.465324
g3505 PPL_03964 DPPB0337b12.r1-5 CDS787939 2094 - 0.391117
g3539 PPL_04003 DPPB0337b12.r1-5 CDS887312 372 + 0.365591
g3591 PPL_04060 DPPB0337b12.r1-5 CDS1041218 3180 + 0.389937
g3618 PPL_04087 DPPB0337b12.r1-5 CDS1110125 507 - 0.384615
g3632 PPL_04102 DPPB0337b12.r1-5 CDS1140928 1545 - 0.350162
g3633 PPL_04103 DPPB0337b12.r1-5 CDS1142942 573 + 0.460733
g3648 PPL_04122 DPPB0337b12.r1-5 CDS1186240 2001 - 0.350825
g3707 PPL_04191 ortholog of the human CPSF2 and yeast CFT2 the 100 kDa subunit of the cleavage and polyadenylation specificity factor (CPSF) complex required for 3' processing of mRNAsDPPB0360e11.f1-5 CDS11473 2217 + 0.410916
g3741 PPL_13093 DPPB0360e11.f1-5 CDS119550 672 + 0.428571
g3817 PPL_04310 DPPB0360e11.f1-5 CDS349802 558 + 0.331541
g3938 PPL_04449 DPPB0360e11.f1-5 CDS727925 1809 + 0.326147
g3942 PPL_04452 DPPB0360e11.f1-5 CDS734117 2112 + 0.441761
g3971 PPL_04483 DPPB0360e11.f1-5 CDS826536 1281 + 0.513661
g3972 PPL_04484 DPPB0360e11.f1-5 CDS828389 744 - 0.373656
g3980 PPL_04495 DPPB0360e11.f1-5 CDS859444 2877 + 0.491832
g4006 PPL_04526 utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNADPPB0360e11.f1-5 CDS943429 1038 - 0.506744
g4009 PPL_04529 DPPB0360e11.f1-5 CDS950442 312 - 0.467949
g4070 PPL_04591 E0KFERV02EE9X2-3_part1 CDS84018 675 + 0.431111
g4090 PPL_04614 catalyzes the reaction ATP L-alanine tRNAAla AMP diphosphate L-alanyl-tRNAAlaE0KFERV02EE9X2-3_part1 CDS132236 2775 - 0.39964
g4130 PPL_04657 conserved NMD3 protein which in S. cerevisiae is involved in the nuclear export of the large ribosomal subunitE0KFERV02EE9X2-3_part1 CDS249970 1575 + 0.428571
g4194 PPL_04731 E0KFERV02EE9X2-3_part1 CDS450036 3021 + 0.409798
g4246 PPL_04799 E0KFERV02EE9X2-3_part1 CDS624976 792 - 0.353535
g4287 PPL_04842 E0KFERV02EE9X2-3_part1 CDS732616 2178 - 0.424242
g4381 PPL_04959 E0KFERV02EE9X2-3_part2 CDS77822 1356 + 0.391593
g4390 PPL_04970 E0KFERV02EE9X2-3_part2 CDS97532 234 - 0.435897
g4466 PPL_05063 orthlog of the human SBDS protein which is mutated in a majority of patients with Shwachman-Bodian-Diamond syndrome localizes to the pseudopodia in cAMP gradientE3JQK7F01CUWUC-3_part1 CDS36124 750 - 0.418667
g4487 PPL_05084 E3JQK7F01CUWUC-3_part1 CDS85012 2190 - 0.356621
g4494 PPL_05093 E3JQK7F01CUWUC-3_part1 CDS99414 1323 - 0.363568
g4518 PPL_05122 E3JQK7F01CUWUC-3_part1 CDS171668 2268 - 0.468254
g4547 PPL_05151 E3JQK7F01CUWUC-3_part1 CDS257549 2799 - 0.410861
g4558 PPL_05163 E3JQK7F01CUWUC-3_part1 CDS281017 576 + 0.390625
g4592 PPL_05200 RrmJFtsJ ribosomal RNA methyltransferase family member well conserved heat shock proteins present in prokaryotes archaea and eukaryotes similar to S. cerevisiae MRM2 required for methylation of U(2791) in 21S rRNAE3JQK7F01CUWUC-3_part1 CDS393029 1011 - 0.340257
g461 PPL_00588 DPPA0004F08.r1-5_part2 CDS1346673 654 - 0.420489
g4622 PPL_05235 E3JQK7F01CUWUC-3_part1 CDS490209 1791 - 0.392518
g468 PPL_00598 ortholog of human and S. pombe nucleolar protein 58 members of this family are involved in a variety of functions during pre-mRNA splicingDPPA0004F08.r1-5_part2 CDS1372812 1728 - 0.479745
g4696 PPL_05321 conserved RNA helicase S. cerevisiae ortholog PRP5 is necessary for pre-spliceosome formationE3JQK7F01EFZL8-5 CDS177338 3474 + 0.447323
g4730 PPL_05356 E3JQK7F01EFZL8-5 CDS280469 381 - 0.480315
g4784 PPL_13186 E3JQK7F01EFZL8-5 CDS435950 585 - 0.425641
g4788 PPL_05424 E3JQK7F01EFZL8-5 CDS447518 762 - 0.451444
g4820 PPL_05458 E3JQK7F01EFZL8-5 CDS542170 1929 + 0.47071
g4842 PPL_05481 E3JQK7F01EFZL8-5 CDS612288 477 + 0.408805
g4858 PPL_05496 E3JQK7F01EFZL8-5 CDS651655 1851 - 0.390059
g4859 PPL_05497 E3JQK7F01EFZL8-5 CDS653687 1524 + 0.423228
g4864 PPL_05503 E3JQK7F01EFZL8-5 CDS670775 636 + 0.457547
g4881 PPL_05524 E3JQK7F01EFZL8-5 CDS716211 1992 - 0.404618
g4884 PPL_05527 E3JQK7F01EFZL8-5 CDS725678 1413 + 0.35598
g4891 PPL_05532 E3JQK7F01EFZL8-5 CDS745340 1293 - 0.451663
g4940 PPL_05586 catalyzes the reaction ATP L-Tyrosine tRNATyr AMP diphosphate L-tyrosyl-tRNATyrE3JQK7F01EFZL8-5 CDS862067 1167 + 0.429306
g4962 PPL_05606 E3JQK7F01EFZL8-5 CDS930213 2190 + 0.426484
g4982 PPL_05621 E3JQK7F01EFZL8-5 CDS984646 1644 - 0.425791
g5035 PPL_05677 E3JQK7F01EFZL8-5 CDS1113240 381 - 0.456693
g5043 PPL_05689 E3JQK7F01EFZL8-5 CDS1138855 1065 - 0.456338
g5083 PPL_05732 E3JQK7F01EFZL8-5 CDS1253196 1992 + 0.431225
g5087 PPL_05737 E3JQK7F01EFZL8-5 CDS1262858 474 - 0.466245
g5113 PPL_05761 E3JQK7F01EFZL8-5 CDS1334188 2145 - 0.440093
g5128 PPL_05774 E3JQK7F01EFZL8-5 CDS1380973 1851 - 0.396002
g5133 PPL_05779 catalyzes the release of N-terminal amino acids preferentially methionine from peptides and arylamidesE3JQK7F01EFZL8-5 CDS1394097 1356 + 0.446903
g5164 PPL_05815 E3JQK7F02G10GF-5 CDS24694 1098 + 0.313297
g5165 PPL_05816 E3JQK7F02G10GF-5 CDS27367 657 + 0.490107
g5178 PPL_05831 ortholog of mammalian EXOSC10 and yeast RRP6 exonuclease component of the nuclear exosome in human part of a post-splicing multiprotein complex involved in both mRNA nuclear export and mRNA surveillanceE3JQK7F02G10GF-5 CDS59970 3036 - 0.413373
g5224 PPL_05876 E3JQK7F02G10GF-5 CDS196259 2001 - 0.426287
g5259 PPL_05912 E3JQK7F02G10GF-5 CDS296827 552 + 0.483696
g5266 PPL_05919 E3JQK7F02G10GF-5 CDS318203 456 + 0.495614
g5270 PPL_05923 E3JQK7F02G10GF-5 CDS329119 351 + 0.487179
g5273 PPL_05927 E3JQK7F02G10GF-5 CDS338840 555 + 0.477477
g5289 PPL_05942 E3JQK7F02G10GF-5 CDS389311 2133 - 0.431786
g5305 PPL_05956 E3JQK7F02G10GF-5 CDS418040 1647 - 0.336369
g5325 PPL_05974 similar to bacterial proteins of the YjgF superfamily homolog of Psedomonas sp. amnD (2-aminomuconate deaminase) also matches PFAM HMM for endoribonuclease L-PSPE3JQK7F02G10GF-5 CDS469965 414 - 0.403382
g5379 PPL_06036 catalyzes the reaction ATP L-valine tRNAVal AMP diphosphate L-valyl-tRNAValE3JQK7F02G10GF-5 CDS625468 3180 + 0.381761
g5424 PPL_06087 E3JQK7F02G10GF-5 CDS745214 2229 + 0.37371
g5449 PPL_06115 catalyzes the reaction ATP L-asparagine tRNAAsn AMP diphosphate L-asparaginyl-tRNAAsn expression is repressed in low calciumE3JQK7F02G10GF-5 CDS819373 1947 - 0.474576
g5473 PPL_06143 E3JQK7F02GERJ7-5 CDS56423 1563 + 0.333973
g5557 PPL_06222 E3JQK7F02HEVRT-5 CDS37731 4347 - 0.355648
g5572 PPL_06237 E3JQK7F02HEVRT-5 CDS78940 1635 + 0.407339
g5576 PPL_06240 E3JQK7F02HEVRT-5 CDS90689 1080 - 0.415741
g5580 PPL_06243 E3JQK7F02HEVRT-5 CDS104624 837 - 0.353644
g5596 PPL_06258 catalyzes the reaction ATP L-phenylalanine tRNAPhe AMP diphosphate L-phenylalanyl-tRNAPheE3JQK7F02HEVRT-5 CDS141850 1434 - 0.420502
g5640 PPL_06317 E3JQK7F02HEVRT-5 CDS290318 477 + 0.463312
g5646 PPL_06323 E3JQK7F02HEVRT-5 CDS316167 2640 - 0.385227
g5672 PPL_06350 E3JQK7F02HEVRT-5 CDS387503 1875 + 0.3952
g5673 PPL_06351 E3JQK7F02HEVRT-5 CDS389686 1461 + 0.404517
g5683 PPL_06362 E3JQK7F02HEVRT-5 CDS411011 1206 - 0.349917
g5695 PPL_06376 protein component of the small (40S) ribosomal subunit highly expressed in vegetative cells and in early developmentE3JQK7F02HEVRT-5 CDS460525 750 + 0.48
g5728 PPL_06414 E3JQK7F02HEVRT-5 CDS566725 276 + 0.442029
g5737 PPL_06425 E3JQK7F02HEVRT-5 CDS610335 2976 - 0.425739
g5739 PPL_13270 E3JQK7F02HEVRT-5 CDS616637 411 - 0.435523
g574 PPL_00707 DPPA0004F08.r1-5_part3 CDS104727 924 - 0.498918
g5771 PPL_06461 E3JQK7F02HEVRT-5 CDS701204 420 + 0.495238
g5847 PPL_06543 E3JQK7F02HP6OU-5 CDS170273 1179 + 0.434266
g5872 PPL_06566 E3JQK7F02HW0LE-5_part1 CDS6204 2349 - 0.408685
g599 PPL_00733 DPPA0004F08.r1-5_part3 CDS184293 1914 - 0.355277
g6060 PPL_06785 E3JQK7F02HW0LE-5_part2 CDS476703 720 - 0.533333
g6061 PPL_06786 E3JQK7F02HW0LE-5_part2 CDS479825 3594 + 0.463272
g6062 PPL_06787 E3JQK7F02HW0LE-5_part2 CDS483539 3024 - 0.444444
g6157 PPL_06883 E3JQK7F02HW0LE-5_part2 CDS745531 2490 + 0.410442
g624 PPL_00757 DPPA0004F08.r1-5_part3 CDS250439 2094 + 0.459408
g6251 PPL_06986 E3JQK7F02HW0LE-5_part2 CDS995117 2220 - 0.354054
g6252 PPL_06987 E3JQK7F02HW0LE-5_part2 CDS997555 1134 - 0.429453
g6279 PPL_07015 E3JQK7F02HW0LE-5_part2 CDS1083374 2739 + 0.379701
g6307 PPL_07047 putative eukaryotic translation initiation factor 2 alpha (eIF2alpha) kinase putative protein serinethreonine kinase contains the RWD domain found in GCN2 kinases and histidyl tRNA synthetases related to the GCN2 family of protein kinases that phosphorylate the alpha subunit of eIF2E3JQK7F02HW0LE-5_part2 CDS1174307 4758 - 0.444515
g6322 PPL_07063 E3JQK7F02HW0LE-5_part2 CDS1225882 483 - 0.354037
g6333 PPL_07077 ortholog of the human CPSF3 and yeast YSH1 the 73 kDa subunit of the cleavage and polyadenylation specificity factor (CPSF) complex required for 3' processing of mRNAsE3JQK7F02HW0LE-5_part2 CDS1253507 2382 + 0.426113
g6381 PPL_07128 E3JQK7F02HW0LE-5_part2 CDS1398605 1644 + 0.372263
g6386 PPL_07134 catalyzes the reaction ATP L-aspartate tRNAAsp AMP diphosphate L-aspartyl-tRNAAspE3JQK7F02HW0LE-5_part2 CDS1416236 1701 + 0.452675
g6387 PPL_07135 E3JQK7F02HW0LE-5_part2 CDS1418892 2391 - 0.420744
g6389 PPL_07137 E3JQK7F02HW0LE-5_part2 CDS1425031 858 - 0.463869
g6395 PPL_07147 E3JQK7F02HW0LE-5_part2 CDS1442239 957 + 0.359457
g6412 PPL_07172 ortholog of S. cerevisiae RRS1 an essential protein that binds ribosomal protein L11 and is required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis mouse homolog shows altered expression in Huntington's disease model miceE3JQK7F02HW0LE-5_part2 CDS1486048 969 - 0.374613
g6427 PPL_07188 E3JQK7F02HW0LE-5_part2 CDS1538082 1209 - 0.492969
g6462 PPL_07225 E3JQK7F02HW0LE-5_part2 CDS1630512 888 - 0.483108
g6485 PPL_13336 E3JQK7F02HW0LE-5_part2 CDS1682441 687 + 0.465793
g6486 PPL_07251 ortholog of ATP-dependent RNA helicase DDX1 contains an SPRY domain which is of unknown functionE3JQK7F02HW0LE-5_part2 CDS1683420 1467 + 0.39741
g65 PPL_00153 DPPA0004F08.r1-5_part2 CDS187560 2856 + 0.367297
g6506 PPL_07275 catalyzes the reaction ATP L-proline tRNAPro AMP diphosphate L-prolyl-tRNAProE3JQK7F02HW0LE-5_part2 CDS1738203 1914 - 0.414316
g6508 PPL_07276 E3JQK7F02HW0LE-5_part2 CDS1743927 651 + 0.491551
g6519 PPL_07288 catalyzes the reaction ATP L-serine tRNASer AMP diphosphate L-seryl-tRNASerE3JQK7F02HW0LE-5_part2 CDS1784520 1344 + 0.480655
g6578 PPL_07353 E3JQK7F02HW0LE-5_part2 CDS1959154 1893 + 0.416799
g6670 PPL_07466 EVG8W8Q01C9YYY-5_part2 CDS43763 630 - 0.419048
g6695 PPL_07493 EVG8W8Q01C9YYY-5_part2 CDS110236 2418 - 0.35732
g6742 PPL_07545 EVG8W8Q01EEF2G-5 CDS45974 1683 - 0.346405
g6791 PPL_07601 EVG8W8Q01EEF2G-5 CDS190731 1134 + 0.332451
g6798 PPL_07607 EVG8W8Q01EEF2G-5 CDS214514 1194 - 0.393635
g6847 PPL_07665 EVG8W8Q02J3HU6-3_part1 CDS46025 906 + 0.34989
g6850 PPL_07668 EVG8W8Q02J3HU6-3_part1 CDS51861 1710 - 0.399415
g6885 PPL_07706 EVG8W8Q02J3HU6-3_part1 CDS125369 885 + 0.363842
g691 PPL_00833 DPPA0004F08.r1-5_part3 CDS425999 1017 - 0.408063
g7009 PPL_07832 EVG8W8Q02J3HU6-3_part1 CDS478472 1305 - 0.34023
g704 PPL_00850 DPPA0061d07.r1-5 CDS8613 1851 + 0.389519
g7049 PPL_07866 EVG8W8Q02J3HU6-3_part1 CDS585427 315 - 0.501587
g7050 PPL_07867 ortholog of the conserved NIP7 nucleolar protein that is required for 60S ribosome subunit biogenesis contains a PUA domainEVG8W8Q02J3HU6-3_part1 CDS586517 633 + 0.309637
g7099 PPL_07917 EVG8W8Q02J3HU6-3_part2 CDS57116 2802 - 0.447894
g7104 PPL_07921 EVG8W8Q02J3HU6-3_part2 CDS72303 387 - 0.465116
g7116 PPL_07932 EVG8W8Q02J3HU6-3_part2 CDS95500 2511 + 0.479092
g7168 PPL_07986 EVG8W8Q02J3HU6-3_part2 CDS245742 672 - 0.35119
g7175 PPL_07995 EVG8W8Q02J3HU6-3_part2 CDS264119 447 + 0.483221
g721 PPL_00870 DPPA0061d07.r1-5 CDS71281 1335 - 0.474157
g7269 PPL_08111 EVG8W8Q02J3HU6-3_part3 CDS171205 600 - 0.466667
g7270 PPL_13391 EVG8W8Q02J3HU6-3_part3 CDS171816 1692 - 0.484043
g7298 PPL_08144 EVG8W8Q02J3HU6-3_part3 CDS255038 348 - 0.387931
g7299 PPL_08145 EVG8W8Q02J3HU6-3_part3 CDS255905 420 - 0.435714
g7382 PPL_08236 EVG8W8Q02J3HU6-3_part3 CDS484253 2154 + 0.399721
g7404 PPL_08264 catalyzes the reaction ATP L-histidine tRNAHis AMP diphosphate L-histidyl-tRNAHis similar to bacterial histidine-tRNA ligaseEVG8W8Q02J3HU6-3_part3 CDS552460 1323 + 0.371126
g7418 PPL_08282 EVG8W8Q02J3HU6-3_part3 CDS591206 669 + 0.475336
g7453 PPL_08319 EVG8W8Q02J3HU6-3_part3 CDS681214 468 - 0.369658
g7510 PPL_08386 EVG8W8Q02J3HU6-3_part3 CDS835824 1110 + 0.345946
g7528 PPL_08408 EVG8W8Q02J3HU6-3_part3 CDS891297 915 + 0.367213
g7541 PPL_08426 EVG8W8Q02J3HU6-3_part3 CDS936525 402 + 0.482587
g7618 PPL_08516 EVG8W8Q02J3HU6-3_part3 CDS1159929 741 + 0.395412
g7657 PPL_08559 EVKQ3GG01CS5PZ-3_part1 CDS33194 576 - 0.409722
g7730 PPL_08636 EVKQ3GG01CS5PZ-3_part1 CDS238687 396 - 0.464646
g7746 PPL_08652 EVKQ3GG01CS5PZ-3_part1 CDS288372 1104 - 0.506341
g7779 PPL_08694 catalyzes the reaction ATP L-arginine tRNAArg AMP diphosphate L-arginyl-tRNAArgEVKQ3GG01CS5PZ-3_part1 CDS378835 1704 + 0.462441
g7814 PPL_08734 EVKQ3GG01CS5PZ-3_part1 CDS478513 741 - 0.417004
g7869 PPL_08792 EVKQ3GG01CS5PZ-3_part1 CDS640627 267 + 0.423221
g7927 PPL_08858 EVKQ3GG01CS5PZ-3_part1 CDS857416 2109 - 0.366999
g7932 PPL_08864 EVKQ3GG01CS5PZ-3_part1 CDS868333 954 - 0.379455
g7965 PPL_08901 EVKQ3GG01CS5PZ-3_part1 CDS962066 1191 + 0.491184
g7993 PPL_08936 EVKQ3GG01CS5PZ-3_part1 CDS1053495 1287 + 0.363636
g7995 PPL_08938 EVKQ3GG01CS5PZ-3_part1 CDS1056769 2514 - 0.402148
g7996 PPL_08939 EVKQ3GG01CS5PZ-3_part1 CDS1059862 1326 + 0.456259
g7999 PPL_08942 EVKQ3GG01CS5PZ-3_part1 CDS1067793 618 - 0.478964
g8001 PPL_08944 EVKQ3GG01CS5PZ-3_part1 CDS1071175 444 - 0.481982
g8020 PPL_08962 EVKQ3GG01CS5PZ-3_part1 CDS1124705 1803 + 0.476983
g8032 PPL_08971 EVKQ3GG01CS5PZ-3_part1 CDS1157225 2640 - 0.373485
g8042 PPL_08983 EVKQ3GG01CS5PZ-3_part1 CDS1187721 663 - 0.472097
g8053 PPL_08993 EVKQ3GG01CS5PZ-3_part1 CDS1206349 954 - 0.353249
g8081 PPL_09024 EVKQ3GG01CS5PZ-3_part1 CDS1286063 333 - 0.498498
g8098 PPL_09040 EVKQ3GG01CS5PZ-3_part1 CDS1324100 3444 - 0.368177
g8100 PPL_09042 EVKQ3GG01CS5PZ-3_part1 CDS1332295 1995 - 0.404511
g8185 PPL_09129 EVKQ3GG01CS5PZ-3_part1 CDS1557286 345 + 0.411594
g8239 PPL_09188 EVKQ3GG01CS5PZ-3_part1 CDS1717559 744 - 0.435484
g8266 PPL_09216 EVKQ3GG01CS5PZ-3_part1 CDS1797376 738 - 0.432249
g8334 PPL_09293 EVKQ3GG01CS5PZ-3_part2 CDS131477 1059 + 0.499528
g8383 PPL_09347 EVKQ3GG01CS5PZ-3_part2 CDS251580 375 - 0.384
g8485 PPL_12093 EVKQ3GG01DOIJB_part1 CDS158408 666 - 0.456456
g8531 PPL_12150 EVKQ3GG01DOIJB_part1 CDS305147 1896 - 0.335443
g8579 PPL_12207 EVKQ3GG01DOIJB_part1 CDS453298 429 - 0.328671
g8610 PPL_12240 EVKQ3GG01DOIJB_part1 CDS535037 429 - 0.328671
g8640 PPL_12273 Ca(2)-dependent phospholipid-binding protein contains two C2 domains and a VWFA domain.EVKQ3GG01DOIJB_part1 CDS613050 1656 + 0.40942
g8662 PPL_12296 protein component of the small (40S) ribosomal subunit ribosomal protein S24 homologEVKQ3GG01DOIJB_part1 CDS688371 378 - 0.436508
g8688 PPL_12323 similar to eukaryotic translation initiation factor 4A isoform 2 EVKQ3GG01DOIJB_part1 CDS756580 1161 - 0.458226
g873 PPL_01040 DPPA0061d07.r1-5 CDS490687 1281 - 0.472287
g874 PPL_01041 similar to eukaryotic translation initiation factor 4A isoform 2 DPPA0061d07.r1-5 CDS493267 1251 + 0.423661
g8760 PPL_12398 EVKQ3GG01DOIJB_part2 CDS126805 561 + 0.461676
g8766 PPL_12406 belongs to the nucleotidyltransferase superfamily contains one poly A polymerase head domainEVKQ3GG01DOIJB_part2 CDS138316 1752 - 0.354452
g8780 PPL_12420 EVKQ3GG01DOIJB_part2 CDS163724 1131 + 0.439434
g8795 PPL_12436 EVKQ3GG01DOIJB_part2 CDS212202 336 - 0.363095
g8812 PPL_12453 EVKQ3GG01DOIJB_part2 CDS254865 1233 - 0.431468
g8816 PPL_12457 EVKQ3GG01DOIJB_part2 CDS263224 2280 + 0.435526
g8820 PPL_12461 EVKQ3GG01DOIJB_part2 CDS271102 1854 + 0.392125
g8831 PPL_12474 EVKQ3GG01DOIJB_part2 CDS306559 561 - 0.433155
g8839 PPL_13498 similar to eukaryotic initiation factor 4A isoform 3EVKQ3GG01DOIJB_part2 CDS329013 1269 - 0.41056
g8860 PPL_12508 catalyzes the reaction ATP L-threonine tRNAThr AMP diphosphate L-threonyl-tRNAThrEVKQ3GG01DOIJB_part2 CDS403847 2139 - 0.467041
g8900 PPL_12548 EVKQ3GG01DOIJB_part2 CDS530047 342 + 0.48538
g897 PPL_01063 DPPA0061d07.r1-5 CDS577476 708 + 0.362994
g9033 PPL_13511 EVKQ3GG02I325Y-5_part1 CDS133136 1638 - 0.383394
g906 PPL_01074 DPPA0061d07.r1-5 CDS603328 1848 + 0.396645
g9062 PPL_09491 catalyzes the reaction: S-adenosyl-L-methionine tRNA S-adenosyl-L-homocysteine tRNA containing 5-methylaminomethyl-2-thiouridylateEVKQ3GG02I325Y-5_part1 CDS210421 1347 - 0.410542
g9098 PPL_09530 conserved splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint the human ortholog (BAT1) forms a homodimer and interacts directly with EVKQ3GG02I325Y-5_part1 CDS336425 1158 + 0.462867
g9195 PPL_09628 EVKQ3GG02I325Y-5_part1 CDS611887 546 - 0.384615
g9206 PPL_09635 EVKQ3GG02I325Y-5_part1 CDS635519 2313 + 0.459144
g9253 PPL_09688 EVKQ3GG02I325Y-5_part1 CDS762710 891 + 0.417508
g9261 PPL_09696 EVKQ3GG02I325Y-5_part1 CDS784696 2154 + 0.409935
g927 PPL_01092 catalyzes the reaction ATP L-threonine tRNAThr AMP diphosphate L-threonyl-tRNAThrDPPA0061d07.r1-5 CDS661614 2208 - 0.428442
g9369 PPL_09814 elongation factor 1 alpha one of two genes coding for the same protein binds and bundles F-actinEVKQ3GG02I325Y-5_part1 CDS1128368 1329 + 0.462754
g9377 PPL_09825 EVKQ3GG02I325Y-5_part1 CDS1150567 270 + 0.388889
g9421 PPL_09878 EVKQ3GG02I325Y-5_part1 CDS1281621 453 - 0.384106
g9449 PPL_09908 protein component of the small (40S) ribosomal subunit ribosomal protein S25 homologEVKQ3GG02I325Y-5_part2_part2 CDS8494 333 - 0.459459
g9454 PPL_09913 EVKQ3GG02I325Y-5_part2_part2 CDS17437 474 + 0.468354
g9468 PPL_09926 EVKQ3GG02I325Y-5_part2_part2 CDS58147 1914 + 0.361024
g9479 PPL_09940 ortholog of the human TRM61 and yeast GCD14 which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA as a heterodimer with EVKQ3GG02I325Y-5_part2_part2 CDS89965 993 - 0.391742
g9496 PPL_13549 EVKQ3GG02I325Y-5_part2_part2 CDS132786 447 + 0.357942
g9534 PPL_10010 EWNM59D01C4IL7-5_part1 CDS104067 498 + 0.493976
g9540 PPL_10017 catalyzes the reaction ATP L-valine tRNAVal AMP diphosphate L-valyl-tRNAValEWNM59D01C4IL7-5_part1 CDS116471 3192 + 0.477444
g9554 PPL_10034 EWNM59D01C4IL7-5_part1 CDS157222 480 + 0.333333
g957 PPL_01123 belongs to the RAS-like GTPase superfamily ortholog of human OLA1DPPA0061d07.r1-5 CDS750659 1182 - 0.42978
g9573 PPL_13555 ortholog of human MCTS1 which is an anti-oncogene that may play a role in cell cycle regulation contains a PUA domain which is predicted to bind RNA EWNM59D01C4IL7-5_part1 CDS212223 276 - 0.384058
g9612 PPL_10093 EWNM59D01C4IL7-5_part1 CDS312144 1920 - 0.399479
g9632 PPL_10114 EWNM59D01C4IL7-5_part1 CDS365679 738 - 0.331978
g9714 PPL_10208 EWNM59D01C4IL7-5_part1 CDS629722 1704 + 0.454225
g9743 PPL_10239 conserved protein containing a Suneukaryotic nucleolar NOL1Nop2p domainEWNM59D01C4IL7-5_part1 CDS714742 2283 - 0.35173
g9747 PPL_10244 EWNM59D01C4IL7-5_part1 CDS728048 435 - 0.344828
g9748 PPL_10245 EWNM59D01C4IL7-5_part1 CDS729201 1041 + 0.37464
g9776 PPL_10283 EWNM59D01C4IL7-5_part1 CDS820241 516 - 0.472868
g9834 PPL_10351 EWNM59D01C4IL7-5_part1 CDS987539 558 - 0.408602
g985 PPL_01150 ortholog of human and S. pombe nucleolar protein 58 members of this family are involved in a variety of functions during pre-mRNA splicingDPPA0061d07.r1-5 CDS823641 1857 - 0.435649
g9922 PPL_10451 EXOLTKG01B86TH-3_part2 CDS82808 756 + 0.398148
g993 PPL_01156 belongs to the IF-2 family an essential component for the initiation of protein synthesisDPPA0061d07.r1-5 CDS843416 1938 + 0.478328
g9935 PPL_10464 EXOLTKG01B86TH-3_part2 CDS125276 1866 + 0.401393
g9953 PPL_10483 EXOLTKG01B86TH-3_part2 CDS166623 441 - 0.39229
rpl7 PPL_11556 PN500-G-d-188d09.r1-5 CDS38813 561 + 0.470588
rpl8 PPL_06670 protein component of the large (60S) ribosomal subunit ribosomal protein L8 homologE3JQK7F02HW0LE-5_part2 CDS202029 762 - 0.503937
trpS PPL_01688 catalyzes the reaction ATP L-tryptophan tRNATrp AMP diphosphate L-tryptophan-tRNAThrDPPA0090b03.f1-3_x_part3 CDS425053 1257 + 0.324582