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2024-05-19 15:20:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Dictyostelium discoideum AX4, AX4

Number of genes found: 395

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Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DDB_G0267794 DDB_G0267794 DDB0232428 CDS860671 1923 - 0.314613
DDB_G0267850 DDB_G0267850 DDB0232428 CDS965758 1857 + 0.310716
DDB_G0267872 DDB_G0267872 conserved protein containing a Suneukaryotic nucleolar NOL1Nop2p domainDDB0232428 CDS1012281 2043 - 0.22467
DDB_G0268518 DDB_G0268518 DDB0232428 CDS810583 792 - 0.272727
DDB_G0269450 DDB_G0269450 DDB0232428 CDS2798117 621 - 0.233494
DDB_G0269640 DDB_G0269640 DDB0232428 CDS3205382 495 - 0.258586
DDB_G0269676 DDB_G0269676 DDB0232428 CDS3289699 1557 - 0.219011
DDB_G0269762 DDB_G0269762 DDB0232428 CDS3512075 2475 - 0.314747
DDB_G0269986 DDB_G0269986 DDB0232428 CDS3977474 2391 + 0.24634
DDB_G0270386 DDB_G0270386 DDB0232428 CDS4735593 1719 + 0.267016
DDB_G0270622 DDB_G0270622 DDB0232428 CDS3391069 255 + 0.298039
DDB_G0270910 DDB_G0270910 DDB0232428 CDS3293315 2934 + 0.293115
DDB_G0271100 DDB_G0271100 DDB0232429 CDS47597 1581 - 0.248577
DDB_G0271370 DDB_G0271370 DDB0232429 CDS115000 933 + 0.222937
DDB_G0271378 DDB_G0271378 DDB0232429 CDS147174 1689 - 0.201895
DDB_G0271396 DDB_G0271396 similar to human EXOSC6 and S. pombe mtr3 which are components of the exosome a 3'-5' exoribonuclease complex involved in RNA processingDDB0232429 CDS213822 654 + 0.318043
DDB_G0271470 DDB_G0271470 DDB0232429 CDS406925 528 - 0.284091
DDB_G0271796 DDB_G0271796 DDB0232429 CDS753355 951 + 0.233438
DDB_G0271854 DDB_G0271854 DDB0232429 CDS969621 849 + 0.269729
DDB_G0271910 DDB_G0271910 ortholog of human MCTS1 which is an anti-oncogene that may play a role in cell cycle regulation contains a PUA domain which is predicted to bind RNA DDB0232429 CDS1018193 549 + 0.26776
DDB_G0271914 DDB_G0271914 DDB0232429 CDS1000440 675 - 0.358519
DDB_G0272030 DDB_G0272030 DDB0232429 CDS1189650 678 - 0.361357
DDB_G0272442 DDB_G0272442 DDB0232429 CDS1598330 705 - 0.307801
DDB_G0272664 DDB_G0272664 DDB0232429 CDS2249594 393 + 0.302799
DDB_G0273135 DDB_G0273135 there is a second copy of this gene DDB0232429 CDS2846671 1029 + 0.221574
DDB_G0273295 DDB_G0273295 there is a second copy of this gene DDB0232429 CDS2642763 369 - 0.273713
DDB_G0273331 DDB_G0273331 there is a second copy of this gene DDB0232429 CDS2538856 657 + 0.242009
DDB_G0273343 DDB_G0273343 there is a second copy of this gene DDB0232429 CDS2638627 1158 - 0.212435
DDB_G0273411 DDB_G0273411 there is a second copy of this gene DDB0232429 CDS2935949 669 + 0.282511
DDB_G0273555 DDB_G0273555 there is a second copy of this gene DDB0232429 CDS3095016 669 - 0.282511
DDB_G0273625 DDB_G0273625 there is a second copy of this gene DDB0232429 CDS3184086 1029 - 0.221574
DDB_G0273771 DDB_G0273771 there is a second copy of this gene DDB0232429 CDS3388529 369 + 0.273713
DDB_G0273777 DDB_G0273777 there is a second copy of this gene DDB0232429 CDS3392002 1158 + 0.212435
DDB_G0273859 DDB_G0273859 there is a second copy of this gene DDB0232429 CDS3492274 657 - 0.242009
DDB_G0274407 DDB_G0274407 DDB0232429 CDS4661589 549 - 0.360656
DDB_G0275081 DDB_G0275081 similar to bacterial proteins of the YjgF superfamily homolog of Psedomonas sp. amnD (2-aminomuconate deaminase) also matches PFAM HMM for endoribonuclease L-PSPDDB0232429 CDS5148814 426 + 0.316901
DDB_G0275509 DDB_G0275509 DDB0232429 CDS6023716 2607 + 0.197929
DDB_G0275613 DDB_G0275613 DDB0232429 CDS5606831 1314 + 0.289954
DDB_G0275673 DDB_G0275673 DDB0232429 CDS5694864 363 + 0.250689
DDB_G0275751 DDB_G0275751 belongs to the IF-2 family an essential component for the initiation of protein synthesisDDB0232429 CDS5859705 2979 - 0.335347
DDB_G0275919 DDB_G0275919 DDB0232429 CDS6037798 2409 - 0.249481
DDB_G0275967 DDB_G0275967 DDB0232429 CDS6187951 1914 - 0.283699
DDB_G0276449 DDB_G0276449 DDB0232429 CDS6977542 1206 - 0.254561
DDB_G0276783 DDB_G0276783 homolog of human EXOSC3 (exosome component 3) and S. cerevisiae RRP40 (Ribosomal RNA-processing protein 40) S. cerevisiae RRP40 is a component of the exosome 3'-5' exoribonuclease complex but lacks exonuclease activityDDB0232429 CDS7291532 714 - 0.278711
DDB_G0277081 DDB_G0277081 DDB0232429 CDS7472098 1179 - 0.262935
DDB_G0277213 DDB_G0277213 DDB0232429 CDS7638955 705 + 0.370213
DDB_G0277347 DDB_G0277347 DDB0232429 CDS7797355 1278 - 0.2723
DDB_G0277355 DDB_G0277355 DDB0232429 CDS7838828 969 - 0.415893
DDB_G0277359 DDB_G0277359 DDB0232429 CDS7855699 1161 + 0.209302
DDB_G0277479 DDB_G0277479 DDB0232429 CDS8152464 1596 + 0.244987
DDB_G0277761 DDB_G0277761 similar to bacterial endoribonucleases similar to human HRSP12 (ribonuclease UK114) an endoribonuclease which cleaves mRNA and inhibits protein synthesis DDB0232429 CDS8470556 390 + 0.346154
DDB_G0278179 DDB_G0278179 contains two myb domains similar to Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein (NP_187752.1) and Mus musculus zuotin related factor 2 (NP_033610.1)DDB0232430 CDS400484 1905 - 0.371129
DDB_G0278505 DDB_G0278505 conserved in bacteria similar to human HEMK1 (hemK methyltransferase family member 1) and S. cerevisiae MTQ1 (mitochondrial N(5)-glutamine methyltransferase MTQ1)DDB0232430 CDS980321 1032 + 0.194767
DDB_G0278841 DDB_G0278841 DDB0232430 CDS1265394 1560 - 0.253846
DDB_G0278937 DDB_G0278937 DDB0232430 CDS1214678 2715 + 0.271455
DDB_G0278955 DDB_G0278955 DDB0232430 CDS1366879 1212 + 0.263201
DDB_G0279205 DDB_G0279205 similar to the conserved CAATT binding factor which is essential for growth and necessary for 60S ribosomal subunit biogenesisDDB0232430 CDS1747299 3162 - 0.280519
DDB_G0279227 DDB_G0279227 DDB0232430 CDS1794406 735 + 0.289796
DDB_G0279557 DDB_G0279557 contains 8 PUF domains D. melanogaster pumilio binds through a PUF domain to the 3' UTR of target mRNAsDDB0232430 CDS2250584 4488 - 0.343806
DDB_G0280251 DDB_G0280251 similar to human EXOSC7 which is a component of the exosome a 3'-5' exoribonuclease complex involved in RNA processingDDB0232430 CDS3165971 975 - 0.285128
DDB_G0280257 DDB_G0280257 DDB0232430 CDS3173383 1245 + 0.324498
DDB_G0280265 DDB_G0280265 DDB0232430 CDS3182303 543 + 0.232044
DDB_G0280287 DDB_G0280287 DDB0232430 CDS3207518 600 - 0.3
DDB_G0280463 DDB_G0280463 DDB0232430 CDS3394025 2241 - 0.262383
DDB_G0280507 DDB_G0280507 DDB0232430 CDS3459592 1359 - 0.260486
DDB_G0280703 DDB_G0280703 DDB0232430 CDS3648372 270 + 0.314815
DDB_G0281097 DDB_G0281097 DDB0232430 CDS4057793 1737 - 0.274036
DDB_G0281601 DDB_G0281601 DDB0232430 CDS4697870 429 - 0.261072
DDB_G0281619 DDB_G0281619 DDB0232430 CDS4714928 1515 + 0.213861
DDB_G0281925 DDB_G0281925 DDB0232430 CDS5132437 1761 - 0.366269
DDB_G0281979 DDB_G0281979 DDB0232430 CDS5208875 855 - 0.281871
DDB_G0282171 DDB_G0282171 DDB0232430 CDS5485189 684 - 0.387427
DDB_G0282255 DDB_G0282255 DDB0232430 CDS5579876 1152 - 0.366319
DDB_G0282387 DDB_G0282387 has similarity to mammalian exonuclease 3'-5' domain-like-containing protein 1 (EXDL1)DDB0232430 CDS5690073 1173 + 0.226769
DDB_G0282855 DDB_G0282855 DDB0232430 CDS6304937 1299 + 0.237875
DDB_G0282961 DDB_G0282961 DDB0232431 CDS57054 1716 - 0.277389
DDB_G0283061 DDB_G0283061 DDB0232431 CDS69391 1032 - 0.293605
DDB_G0283275 DDB_G0283275 similar to bacterial 50S ribosomal L4L1e proteinsDDB0232431 CDS442808 777 + 0.292149
DDB_G0283309 DDB_G0283309 similar to the eIF-2B alphabetadelta subunits familyDDB0232431 CDS511242 1041 - 0.397695
DDB_G0283407 DDB_G0283407 DDB0232431 CDS632298 1368 - 0.214181
DDB_G0283445 DDB_G0283445 DDB0232431 CDS707432 1284 + 0.221184
DDB_G0283773 DDB_G0283773 putative GTPase very conserved in protozoa and fungiDDB0232431 CDS1081883 1305 - 0.288123
DDB_G0283823 DDB_G0283823 DDB0232431 CDS1177277 600 + 0.273333
DDB_G0283861 DDB_G0283861 DDB0232431 CDS1072483 564 + 0.289007
DDB_G0284053 DDB_G0284053 DDB0232431 CDS1473938 714 + 0.268908
DDB_G0284575 DDB_G0284575 DDB0232431 CDS2173651 1815 - 0.344353
DDB_G0284841 DDB_G0284841 DDB0232431 CDS2510140 2640 + 0.273106
DDB_G0285237 DDB_G0285237 DDB0232431 CDS2990906 705 + 0.28227
DDB_G0285377 DDB_G0285377 DDB0232431 CDS3204171 666 - 0.279279
DDB_G0285499 DDB_G0285499 DDB0232431 CDS3314745 5034 + 0.197855
DDB_G0285543 DDB_G0285543 DDB0232431 CDS3362096 2157 + 0.255911
DDB_G0286023 DDB_G0286023 DDB0232431 CDS3954952 264 - 0.32197
DDB_G0286161 DDB_G0286161 DDB0232431 CDS4152139 1269 + 0.291568
DDB_G0286567 DDB_G0286567 DDB0232431 CDS4642679 1848 + 0.237554
DDB_G0286871 DDB_G0286871 DDB0232431 CDS5008976 573 + 0.233857
DDB_G0286929 DDB_G0286929 DDB0232431 CDS5090123 651 + 0.27957
DDB_G0286941 DDB_G0286941 DDB0232431 CDS5119924 2415 + 0.291511
DDB_G0287079 DDB_G0287079 DDB0232431 CDS5302047 1824 + 0.247259
DDB_G0287639 DDB_G0287639 DDB0232432 CDS538405 2037 + 0.258714
DDB_G0288019 DDB_G0288019 DDB0232432 CDS981451 720 - 0.306944
DDB_G0288099 DDB_G0288099 DDB0232432 CDS1100340 765 - 0.256209
DDB_G0288157 DDB_G0288157 DDB0232432 CDS1161244 732 - 0.266393
DDB_G0288477 DDB_G0288477 DDB0232432 CDS1580012 1914 - 0.3093
DDB_G0288821 DDB_G0288821 DDB0232432 CDS2033361 951 - 0.33123
DDB_G0288897 DDB_G0288897 DDB0232432 CDS2093655 1050 - 0.202857
DDB_G0289303 DDB_G0289303 DDB0232432 CDS2604715 1350 - 0.295556
DDB_G0289401 DDB_G0289401 DDB0232432 CDS2748299 780 - 0.255128
DDB_G0289415 DDB_G0289415 DDB0232432 CDS2775105 2037 - 0.307806
DDB_G0289469 DDB_G0289469 similar to D. purpureum and P. pallidum protein C-terminal region similar to ribosomal protein S15P familyDDB0232432 CDS2826905 1824 + 0.307018
DDB_G0289987 DDB_G0289987 DDB0232432 CDS3515224 3111 + 0.309547
DDB_G0290031 DDB_G0290031 belongs to the ribosomal protein S8e family ortholog of human TINP1 (TGF-beta-inducible nuclear protein 1) and S. cerevisiae NSA2 NSA2 (NOP seven associated 2) is involved in the biogenesis of the 60S ribosomal subunitDDB0232432 CDS3562515 783 + 0.342273
DDB_G0290147 DDB_G0290147 DDB0232432 CDS3711190 345 + 0.292754
DDB_G0290299 DDB_G0290299 DDB0232432 CDS3922756 363 - 0.289256
DDB_G0290387 DDB_G0290387 similar to D. purpureum proteins small gene family in both speciesDDB0232432 CDS4019200 927 + 0.307443
DDB_G0290553 DDB_G0290553 DDB0232432 CDS4265295 1506 - 0.233732
DDB_G0291310 DDB_G0291310 DDB0232433 CDS112763 1143 + 0.314086
DDB_G0291328 DDB_G0291328 DDB0232433 CDS128308 744 - 0.322581
DDB_G0291820 DDB_G0291820 DDB0232433 CDS810431 942 - 0.314225
DDB_G0292010 DDB_G0292010 DDB0232433 CDS1014321 2334 + 0.288346
DDB_G0292048 DDB_G0292048 DDB0232433 CDS1082258 774 + 0.237726
DDB_G0292080 DDB_G0292080 DDB0232433 CDS1159633 972 + 0.359053
DDB_G0292096 DDB_G0292096 contains a cytidine and deoxycytidylate deaminase zinc-binding region contains a carbohydrate-binding domain contains a predicted signal peptideDDB0232433 CDS1176701 966 - 0.421325
DDB_G0292108 DDB_G0292108 DDB0232433 CDS1192584 2490 - 0.278715
DDB_G0292138 DDB_G0292138 DDB0232433 CDS1250981 552 + 0.309783
DDB_G0292286 DDB_G0292286 DDB0232433 CDS1390052 3726 + 0.27241
DDB_G0292626 DDB_G0292626 belongs to the RAS-like GTPase superfamily similar to bacterial GTP-binding protein YchF similar to D. purpureum proteinDDB0232433 CDS1866598 1230 + 0.293496
DDB_G0292692 DDB_G0292692 DDB0232433 CDS1955631 882 + 0.246032
DDB_G0292882 DDB_G0292882 DDB0232433 CDS2208837 1020 - 0.32549
DDB_G0292914 DDB_G0292914 DDB0232433 CDS2269065 723 + 0.262794
DDB_G0293064 DDB_G0293064 DDB0232433 CDS2418202 1722 - 0.334495
DDB_G0293090 DDB_G0293090 DDB0232433 CDS2463701 6024 + 0.336155
DDB_G0293244 DDB_G0293244 DDB0232433 CDS2638704 1941 + 0.297269
DDB_G0293504 DDB_G0293504 belongs to the nucleotidyltransferase superfamily contains one poly A polymerase head domainDDB0232433 CDS2968920 1677 - 0.285033
DDB_G0293622 DDB_G0293622 DDB0232433 CDS3159608 2976 + 0.290995
DDB_G0295715 DDB_G0295715 DDB0232430 CDS5300180 4668 + 0.322408
DDB_G0295845 DDB_G0295845 DDB0232429 CDS1309841 711 - 0.299578
DG2033 DDB_G0278965 DDB0232430 CDS1480041 5043 + 0.223478
alaS DDB_G0277823 catalyzes the reaction ATP L-alanine tRNAAla AMP diphosphate L-alanyl-tRNAAlaDDB0232430 CDS919657 2841 - 0.377684
argS1 DDB_G0272867 catalyzes the reaction ATP L-arginine tRNAArg AMP diphosphate L-arginyl-tRNAArgDDB0232429 CDS2065311 1770 + 0.332203
argS2 DDB_G0287803 catalyzes the reaction ATP L-arginine tRNAArg AMP diphosphate L-arginyl-tRNAArgDDB0232432 CDS724797 2217 + 0.280108
asnS1 DDB_G0275263 catalyzes the reaction ATP L-asparagine tRNAAsn AMP diphosphate L-asparaginyl-tRNAAsn expression is repressed in low calciumDDB0232429 CDS5075841 1962 - 0.356269
asnS2 DDB_G0268100 catalyzes the reaction ATP L-asparagine tRNAAsn AMP diphosphate L-asparaginyl-tRNAAsn similar to bacterial Asn-tRNA-ligasesDDB0232428 CDS1453036 1383 - 0.315257
aspA DDB_G0271924 catalyzes the reaction L-asparagine Hsub2subO L-aspartate NHsub3subDDB0232429 CDS1048524 1308 + 0.316514
aspS1 DDB_G0272236 catalyzes the reaction ATP L-aspartate tRNAAsp AMP diphosphate L-aspartyl-tRNAAspDDB0232429 CDS1722204 1731 + 0.367995
aspS2 DDB_G0272304 catalyzes the reaction ATP L-aspartate tRNAAsp AMP diphosphate L-aspartyl-tRNAAspDDB0232429 CDS1720046 1710 + 0.201754
bms1l DDB_G0287891 DDB0232432 CDS751626 3618 + 0.298784
bxdc2 DDB_G0287937 ortholog of the H. sapiens BXDC2 and S. cerevisiae BRX1 a nucleolar protein involved in the assembly of the large ribosomal subunitDDB0232432 CDS871082 981 - 0.313965
bxdc5 DDB_G0285829 ortholog of S. cerevisiae RPF1 and H. sapiens BXDC5 a nucleolar protein involved in the assembly of the large ribosomal subunitDDB0232431 CDS3708077 954 - 0.292453
cpsf2 DDB_G0270392 ortholog of the human CPSF2 and yeast CFT2 the 100 kDa subunit of the cleavage and polyadenylation specificity factor (CPSF) complex required for 3' processing of mRNAsDDB0232428 CDS4749183 2355 + 0.292144
cpsf3 DDB_G0274799 ortholog of the human CPSF3 and yeast YSH1 the 73 kDa subunit of the cleavage and polyadenylation specificity factor (CPSF) complex required for 3' processing of mRNAsDDB0232429 CDS3904161 2325 - 0.308387
cysS DDB_G0287159 catalyzes the reaction ATP L-cysteine tRNACys AMP diphosphate L-cysteinyl-tRNACysDDB0232431 CDS5412959 1983 - 0.328795
dclre1 DDB_G0277755 putative ortholog of yeast PSO2 gene required for double-strand break repair also related to the NHEJ DNA repair protein ArtemisDDB0232429 CDS8451915 2763 + 0.247557
ddiA DDB_G0281293 DDB0232430 CDS4362245 672 - 0.352679
ddx1 DDB_G0269966 ortholog of ATP-dependent RNA helicase DDX1 contains an SPRY domain which is of unknown functionDDB0232428 CDS3941617 2298 + 0.302002
ddx10 DDB_G0284017 DDB0232431 CDS1436851 2637 + 0.277209
ddx17 DDB_G0293168 conserved RNA helicase very similar to mammalian DDX17 (p72) and DDX5 (p68) and yeast DBP2DDB0232433 CDS2360817 2358 - 0.370229
ddx18 DDB_G0282741 DDB0232430 CDS6230156 1809 - 0.334439
ddx20 DDB_G0277527 ortholog of H. sapiens DDX20Gemin 3 a component of Cajal bodies (CBs) and Gems nuclear organelles responsible for spliceosomal small nuclear ribonucleoprotein (snRNP) biogenesisDDB0232429 CDS8128317 2550 - 0.22902
ddx24 DDB_G0281841 DDB0232430 CDS5000989 2823 + 0.30039
ddx27 DDB_G0281711 DDB0232430 CDS4866495 2352 + 0.305697
ddx3 DDB_G0283661 conserved RNA helicase very similar to mammalian DDX3X and DDX3Y and yeast DBP1DDB0232431 CDS939305 2139 - 0.370266
ddx31 DDB_G0271708 DDB0232429 CDS830367 2727 + 0.26696
ddx41 DDB_G0287361 conserved RNA helicase ortholog of D. melanogaster DEAD box protein abstrakt which is required during post-transcriptional gene expressionDDB0232432 CDS183547 2016 - 0.315476
ddx42 DDB_G0288501 conserved putative RNA helicase very similar to mammalian DDX42DDB0232432 CDS1607944 2961 + 0.274232
ddx47 DDB_G0280147 DDB0232430 CDS3015956 1641 - 0.312614
ddx49 DDB_G0270396 DDB0232428 CDS4752654 1527 + 0.27112
ddx5 DDB_G0293036 DDB0232433 CDS2373448 2094 + 0.258835
ddx51 DDB_G0293740 DDB0232433 CDS3249527 1692 - 0.229905
ddx52 DDB_G0274325 ortholog of H. sapiens DDX52 and S. cerevisiae ROK1 (Rescuer Of Kem1) ROK1 required for 18S rRNA synthesisDDB0232429 CDS3957548 2007 + 0.271051
ddx55 DDB_G0291588 ortholog of H. sapiens DDX55 and S. cerevisiae SBP4 (Suppressor of PAB1) SBP4 required for synthesis of 60S ribosomal subunitsDDB0232433 CDS577637 1992 - 0.270582
ddx56 DDB_G0280407 ortholog of H. sapiens DDX56 and S. cerevisiae DBP9 (Dead Box Protein 9) involved in biogenesis of the 60S ribosomal subunitDDB0232430 CDS3312082 2058 + 0.266764
ddx6 DDB_G0291804 ortholog of H. sapiens DDX6 and S. cerevisiae DHH1 (DExDH-box Helicase)DDB0232433 CDS773358 1272 + 0.367925
denr DDB_G0279677 conserved protein contains a translation initiation factor SUI1 domainDDB0232430 CDS2428511 675 - 0.29037
dgat2 DDB_G0290279 conserved diglyceride acyltransferase most similar to U. ramanniana DGAT2B and H. sapiens DGAT2 catalyzing the reaction: acyl-CoA 12-diacylglycerol CoA triacylglycerol DDB0232432 CDS3856720 993 - 0.300101
dimt1l DDB_G0283789 essential protein that dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle in S. cerevisiaeDDB0232431 CDS1107655 945 + 0.285714
dph1 DDB_G0284257 ortholog to the conserved DPH1 which in S. cerevisiae is required for synthesis of diphthamide a modified histidine residue of translation elongation factor 2DDB0232431 CDS1781348 1419 - 0.319239
dph2 DDB_G0295687 similar to the conserved DPH2 which in S. cerevisiae is required for synthesis of diphthamide a modified histidine residue of translation elongation factor 2DDB0232430 CDS2638120 1767 + 0.24335
dph5 DDB_G0276115 ortholog to the conserved DPH5 a methyltransferase which in S. cerevisiae is required for synthesis of diphthamide a modified histidine residue of translation elongation factor 2DDB0232429 CDS6268498 822 + 0.306569
drpp21 DDB_G0290281 ortholog of RPR2 a subunit of nuclear RNase P which cleaves tRNA precursors to generate mature 5' endsDDB0232432 CDS3858234 675 - 0.185185
drpp30 DDB_G0269980 DDB0232428 CDS3962023 1101 + 0.288828
dtd DDB_G0291273 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr) in yeast substrate specifity may be broaderDDB0232433 CDS40029 456 + 0.300439
dus1l DDB_G0278803 ortholog of S. cerevisiae DUS1 and the animal DUS1L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232430 CDS1208252 1308 + 0.323395
dus2l DDB_G0283877 ortholog of S. cerevisiae SMM1 and the animal DUS2L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232431 CDS1134008 1209 + 0.276261
dus3l DDB_G0292686 ortholog of S. cerevisiae DUS3 and the animal DUS3L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232433 CDS1949203 2016 + 0.291171
dus4l DDB_G0291360 ortholog of S. cerevisiae DUS4 and the animal DUS4L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232433 CDS180987 1035 - 0.282126
eIF1 DDB_G0274239 EIF1SUI1 ortholog the eukaryotic initiation factor 1 involved in recognition of the initiator codonDDB0232429 CDS4232211 333 - 0.336336
eIF1a DDB_G0278205 EIF1AX (eukaryotic initiation factor 1A X-linked) and EIF1AY (eukaryotic initiation factor 1A Y-linked) homologDDB0232430 CDS473374 426 - 0.335681
eIF4e DDB_G0268574 EIF4E ortholog the eukaryotic initiation factor 4E recognizes and binds the RNA cap during protein synthesisDDB0232428 CDS1556730 753 + 0.310757
eIF4e3 DDB_G0270406 EIF4E3 ortholog the eukaryotic initiation factor 4E member 3 recognizes and binds the RNA cap during protein synthesisDDB0232428 CDS4795840 2442 - 0.28706
eIF5 DDB_G0286753 EIF5 ortholog the eukaryotic initiation factor 5 catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complexDDB0232431 CDS4930004 1182 + 0.337563
eIF5b DDB_G0278815 EIF5B ortholog the eukaryotic initiation factor 5B promotes the binding of tRNA to the ribosomeDDB0232430 CDS1232003 3138 - 0.360102
eIF6 DDB_G0276493 prevents 60S and 40S ribosomal subunits to form the 80S ribosome by binding to the 60S subunit in Dictyosteliium nutrition uptake stimulates gene expressionDDB0232429 CDS6856691 735 - 0.361905
eRF3 DDB_G0277919 DDB0232430 CDS855258 1674 - 0.390681
efa1B DDB_G0284035 DDB0232431 CDS1535647 651 + 0.391705
efaAI DDB_G0269134 elongation factor 1 alpha one of two genes coding for the same protein binds and bundles F-actin expressed in prespore cellsDDB0232428 CDS2795744 1362 - 0.432452
efaAII DDB_G0269136 elongation factor 1 alpha one of two genes coding for the same protein binds and bundles F-actinDDB0232428 CDS2431765 1362 - 0.417768
efbA DDB_G0288373 translocates peptidyl-tRNA from the aminoacyl site to the peptidyl site on the ribosome during protein synthesis null mutants still synthesis protein suggesting that EF-2b (cinC) is the real translation elongation gectorDDB0232432 CDS1470619 2520 + 0.418651
eftud1 DDB_G0279689 DDB0232430 CDS2446020 3495 - 0.303577
eftud2 DDB_G0283359 highly conserved U5 small nuclear ribonucleoprotein subunit that is similar to elongation factor Tu ortholog of yeast SNU114 and human EFTUD2DDB0232431 CDS569125 3057 - 0.328099
eif2b1 DDB_G0288961 DDB0232432 CDS2146739 966 + 0.295031
eif2b2 DDB_G0291271 DDB0232433 CDS38541 1167 - 0.288775
eif2b3 DDB_G0290693 EIF2B3 ortholog the eukaryotic initiation factor 2B gamma subunit guanyl nucleotide exchange factor for eIF2 defects are linked to leukoencephalopathy with vanishing white matterDDB0232432 CDS4424632 1323 + 0.265306
eif2b4 DDB_G0290759 ortholog of human EIF2B4 delta subunit of the translation initiation factor eIF2B the guanine-nucleotide exchange factor for eIF2DDB0232432 CDS4569158 1860 + 0.317204
eif2b5 DDB_G0283163 EIF2B5 ortholog the eukaryotic initiation factor 2B epsilon subunit guanyl nucleotide exchange factor for eIF2 defects are linked to leukoencephalopathy with vanishing white matterDDB0232431 CDS349612 2124 - 0.303672
eif2s1 DDB_G0271862 EIF2S1 ortholog the eukaryotic initiation factor 2 alpha subunit in human binds to the 40S ribosome and to the mRNA for form a preinitiation complex contains an S1 RNA-binding domain characteristic of eIF2alphaDDB0232429 CDS944209 1026 + 0.334308
eif2s2 DDB_G0282035 EIF2S2 ortholog the eukaryotic initiation factor 2 beta subunit in human binds to the 40S ribosome and to the mRNA for form a preinitiation complex complex composed of 3 subunitsDDB0232430 CDS5298628 954 - 0.348008
eif2s3 DDB_G0278967 DDB0232430 CDS1529248 1383 - 0.348518
eif5a DDB_G0284861 DDB0232431 CDS2766075 480 + 0.395833
elp DDB_G0287987 similar to elongation factor 2 (EF-2) but lacks the EF-Tu binding domain 2 and EF-G domain EF-2 translocates peptidyl-tRNA from the aminoacyl site to the peptidyl site on the ribosome during protein synthesisDDB0232432 CDS934832 2520 + 0.271429
erf1 DDB_G0288613 class I release factor of the translation termination machinery in eukaryotes with the universal genetic code predicted to recognizes all stop codons (UAA UAG and UGA)DDB0232432 CDS1753244 1326 - 0.361991
exdl2A DDB_G0278079 very similar to mammalian exonuclease 3'-5' domain-like-containing protein 2 (EXDL2) the upstream Dictyostelium gene is very similarDDB0232430 CDS242964 2157 + 0.243394
exdl2B DDB_G0278593 very similar to mammalian exonuclease 3'-5' domain-like-containing protein 2 (EXDL2) the downstream Dictyostelium gene is very similarDDB0232430 CDS240471 2061 + 0.246482
exosc10 DDB_G0271572 ortholog of mammalian EXOSC10 and yeast RRP6 exonuclease component of the nuclear exosome in human part of a post-splicing multiprotein complex involved in both mRNA nuclear export and mRNA surveillanceDDB0232429 CDS601251 3588 - 0.298495
fam49 DDB_G0272190 DDB0232429 CDS1409267 948 - 0.337553
fbl DDB_G0269878 utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNADDB0232428 CDS3783828 1005 + 0.418905
fsjA DDB_G0280483 ortholog of the RrmJFtsJ ribosomal RNA methyltransferase a well conserved heat shock protein present in prokaryotes archaea and eukaryotes responsible for methylating 23 S rRNADDB0232430 CDS3432872 813 - 0.264453
fsjB DDB_G0271998 RrmJFtsJ ribosomal RNA methyltransferase family member well conserved heat shock proteins present in prokaryotes archaea and eukaryotes similar to S. cerevisiae MRM2 required for methylation of U(2791) in 21S rRNADDB0232429 CDS1135748 1923 - 0.24753
fsjC DDB_G0284945 RrmJFtsJ ribosomal RNA methyltransferase family member well conserved heat shock proteins present in prokaryotes archaea and eukaryotes this is the ortholog of H. sapiens FTSJ3 involved in rRNA processing and 60S ribosomal subunit maturation (yeast)DDB0232431 CDS2672551 2502 - 0.321343
gatA DDB_G0286875 catalyzes the reaction ATP L-glutamyl-tRNA(Gln) L-glutamine ADP phosphate L-glutaminyl-tRNA(Gln) L-glutamateDDB0232431 CDS5011319 1653 + 0.260738
gatB DDB_G0268776 catalyzes the reaction ATP L-glutamyl-tRNA(Gln) L-glutamine ADP phosphate L-glutaminyl-tRNA(Gln) L-glutamateDDB0232428 CDS2075252 1617 + 0.260359
gfm1 DDB_G0270482 DDB0232428 CDS2561561 2205 + 0.329252
gfm2 DDB_G0267766 DDB0232428 CDS806804 2298 - 0.29765
glnS DDB_G0289481 induced by cycloheximide catalyzes the reaction ATP L-glutamine tRNAGln AMP diphosphate L-glutaminyl-tRNAGlnDDB0232432 CDS2857147 2340 + 0.335043
gluS DDB_G0287467 catalyzes the reaction ATP L-glutamate tRNAGlu AMP diphosphate L-glutamyl-tRNAGluDDB0232432 CDS295392 2295 - 0.34902
glyS DDB_G0284583 catalyzes the reaction ATP glycine tRNAGly AMP diphosphate glycyl-tRNAGlyDDB0232431 CDS2181616 2037 + 0.354934
gmppA DDB_G0271858 catalyzes the reaction GTP alpha-D-mannose 1-phosphate diphosphate GDP-mannoseDDB0232429 CDS932853 1239 - 0.305892
gmppB DDB_G0287619 catalyzes the reaction GTP alpha-D-mannose 1-phosphate diphosphate GDP-mannoseDDB0232432 CDS482074 1080 + 0.324074
hbs1 DDB_G0283769 DDB0232431 CDS1138835 2190 + 0.306393
helA DDB_G0292992 DDB0232433 CDS2367392 3276 + 0.291209
helB1 DDB_G0275443 conserved RNA helicase S. cerevisiae ortholog PRP5 is necessary for pre-spliceosome formationDDB0232429 CDS5780689 3456 - 0.335938
helB2 DDB_G0277857 conserved RNA helicase S. cerevisiae ortholog PRP28 is involved in RNA isomerization at the 5' splice siteDDB0232430 CDS776296 2505 + 0.335729
helC DDB_G0281553 DDB0232430 CDS4949807 1398 + 0.286838
hisS DDB_G0274159 catalyzes the reaction ATP L-histidine tRNAHis AMP diphosphate L-histidyl-tRNAHisDDB0232429 CDS4879244 1446 + 0.342324
ifdA DDB_G0269146 similar to eukaryotic translation initiation factor 4A isoform 2 DDB0232428 CDS2640023 1188 + 0.393939
ifkA DDB_G0272837 eukaryotic translation initiation factor 2 alpha (eIF2alpha) kinase putative protein serinethreonine kinase contains two kinase domains and a HisRS domain N-terminal kinase domain related to STE group C-terminal kinase domain related to GCN2 subfamilyDDB0232429 CDS2194537 6777 + 0.273425
ifkB DDB_G0276829 putative eukaryotic translation initiation factor 2 alpha (eIF2alpha) kinase putative protein serinethreonine kinase related to the GCN2 family of protein kinases contains a kinase domain and a HisRS domainDDB0232429 CDS7412574 4077 + 0.297768
ifkC DDB_G0276043 putative eukaryotic translation initiation factor 2 alpha (eIF2alpha) kinase putative protein serinethreonine kinase contains the RWD domain found in GCN2 kinases and histidyl tRNA synthetases related to the GCN2 family of protein kinases that phosphorylate the alpha subunit of eIF2DDB0232429 CDS6510818 5103 - 0.277288
ileS DDB_G0278293 catalyzes the reaction ATP L-isoleucine tRNAIle AMP diphosphate L-isoleucyl-tRNAIleDDB0232430 CDS632971 3204 - 0.36236
imp3 DDB_G0278983 ortholog of the conserved eukaryotic IMP3 component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP) required for pre-18S rRNA processing forms a heterotrimeric complex containing IMP4 and MPP10DDB0232430 CDS1474915 534 + 0.275281
imp4 DDB_G0302418 ortholog of the conserved eukaryotic IMP4 component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP) required for pre-18S rRNA processing forms a heterotrimeric complex containing IMP3 and MPP10DDB0232430 CDS4835697 861 + 0.297329
ints11 DDB_G0278189 ortholog of integrator complex subunit 1 component of a multiprotein mediator of small nuclear RNA processingDDB0232430 CDS423737 2235 + 0.273825
ints9 DDB_G0282473 ortholog of integrator complex subunit 9 component of a multiprotein mediator of small nuclear RNA processingDDB0232430 CDS5815575 2139 - 0.255259
iptA DDB_G0277215 similar to plant pathogenic bacteria Ipt proteins involved in cytokinin synthesis IPP transferases modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37)DDB0232429 CDS7652688 852 - 0.252347
iptB DDB_G0291528 DDB0232433 CDS482754 1569 + 0.203952
iptC-1 DDB_G0273039 IPP transferases modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) there is a second copy of this gene DDB0232429 CDS2360286 1242 + 0.223027
iptC-2 DDB_G0274017 IPP transferases modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) there is a second copy of this gene DDB0232429 CDS3669962 1242 - 0.223027
leuS DDB_G0285451 catalyzes the reaction ATP L-leucine tRNALeu AMP diphosphate L-leucyl-tRNALeuDDB0232431 CDS3240792 3177 + 0.352849
lysS DDB_G0281437 catalyzes the reaction ATP L-lysine tRNALys AMP diphosphate L-lysyl-tRNALysDDB0232430 CDS4498697 1656 - 0.384058
malaS DDB_G0275655 catalyzes the reaction ATP L-alanine tRNAAla AMP diphosphate L-alanyl-tRNAAlaDDB0232429 CDS5835586 2799 + 0.287245
map1d DDB_G0280127 releases N-terminal amino acids preferentially methionine from peptides and arylamides ortholog of the human mitochondrial MAPD1DDB0232430 CDS2983397 1215 - 0.283951
maspS DDB_G0270152 catalyzes the reaction ATP L-aspartate tRNAAsp AMP diphosphate L-aspartyl-tRNAAspDDB0232428 CDS4321908 2079 - 0.292929
mcysS DDB_G0277295 catalyzes the reaction ATP L-cysteine tRNACys AMP diphosphate L-cysteinyl-tRNACysDDB0232429 CDS7755927 1752 + 0.250571
metS DDB_G0279113 catalyzes the reaction ATP L-methionine tRNAMet AMP diphosphate L-methionyl-tRNAMetDDB0232430 CDS1648404 2211 - 0.341022
metap1 DDB_G0279433 catalyzes the release of N-terminal amino acids preferentially methionine from peptides and arylamidesDDB0232430 CDS2043258 1104 - 0.320652
metap2 DDB_G0270264 catalyzes the release of N-terminal amino acids preferentially methionine from peptides and arylamidesDDB0232428 CDS4531797 1311 + 0.348589
mgluS DDB_G0271906 catalyzes the reaction ATP L-glutamate tRNAGlu AMP diphosphate L-glutamyl-tRNAGluDDB0232429 CDS1062208 1755 - 0.267236
mhisS DDB_G0269822 catalyzes the reaction ATP L-histidine tRNAHis AMP diphosphate L-histidyl-tRNAHis similar to bacterial histidine-tRNA ligaseDDB0232428 CDS3669575 1506 - 0.249004
mileS DDB_G0293030 catalyzes the reaction ATP L-isoleucine tRNAIle AMP diphosphate L-isoleucyl-tRNAIleDDB0232433 CDS2348091 3105 - 0.287601
mleuS DDB_G0291346 catalyzes the reaction ATP L-leucine tRNALeu AMP diphosphate L-leucyl-tRNALeuDDB0232433 CDS154547 2823 + 0.29791
mlysS DDB_G0286517 catalyzes the reaction ATP L-lysine tRNALys AMP diphosphate L-lysyl-tRNALysDDB0232431 CDS4584316 1848 + 0.267316
mmetS DDB_G0285759 catalyzes the reaction ATP L-methionine tRNAMet AMP diphosphate L-methionyl-tRNAMetDDB0232431 CDS3423740 1728 + 0.305556
mpheS DDB_G0274371 catalyzes the reaction ATP L-phenylalanine tRNAPhe AMP diphosphate L-phenylalanyl-tRNAPheDDB0232429 CDS3786786 1365 - 0.276923
mpp10 DDB_G0279245 ortholog of H. sapiens MPHOSPH10 and S. cerevisiae MPP10 protein component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP) required for pre-18S rRNA processing forms a heterotrimeric complex containing IMP3 IMP4DDB0232430 CDS1824604 2298 + 0.27154
mproS DDB_G0276079 catalyzes the reaction ATP L-proline tRNAPro AMP diphosphate L-prolyl-tRNAProDDB0232429 CDS6422563 2025 + 0.25284
mrpl13 DDB_G0274959 DDB0232429 CDS4669717 684 + 0.312865
mrpl15 DDB_G0284405 DDB0232431 CDS1955406 756 + 0.308201
mrpl17 DDB_G0281435 DDB0232430 CDS4497695 549 + 0.29326
mrpl21 DDB_G0288799 DDB0232432 CDS1981150 519 - 0.265896
mrpl22 DDB_G0279519 DDB0232430 CDS2194197 714 - 0.285714
mrpl27 DDB_G0278889 DDB0232430 CDS1343635 429 + 0.298368
mrpl3 DDB_G0288983 DDB0232432 CDS2204231 1056 - 0.321023
mrpl33 DDB_G0278023 DDB0232430 CDS172946 192 - 0.265625
mrpl34 DDB_G0295825 DDB0232430 CDS4856414 510 - 0.252941
mrps10 DDB_G0279855 DDB0232430 CDS2553750 396 - 0.318182
mrps17 DDB_G0277195 DDB0232429 CDS7731826 384 - 0.273438
mrt4 DDB_G0276411 DDB0232429 CDS6846542 672 - 0.282738
mserS DDB_G0267604 catalyzes the reaction ATP L-serine tRNASer AMP diphosphate L-seryl-tRNASerDDB0232428 CDS406648 1578 - 0.299113
mtrpS DDB_G0274567 catalyzes the reaction ATP L-tryptophan tRNATrp AMP diphosphate L-tryptophan-tRNAThr similar to bacterial tryptophan-tRNA ligasesDDB0232429 CDS3980092 1134 - 0.261023
mtyrS DDB_G0279715 catalyzes the reaction ATP L-Tyrosine tRNATyr AMP diphosphate L-tyrosyl-tRNATyr similar to bacterial tyrosine-tRNA ligasesDDB0232430 CDS2475392 1449 - 0.287095
nhp2l1 DDB_G0282243 ortholog of human NHP2L1 which is believed to play a role in spliceosome assembly similar to ribosomal protein L7AE but is not likely to be a ribosomal proteinDDB0232430 CDS5564223 390 + 0.348718
nip7 DDB_G0295477 ortholog of the conserved NIP7 nucleolar protein that is required for 60S ribosome subunit biogenesis contains a PUA domainDDB0232429 CDS615393 540 + 0.272222
nmd3 DDB_G0271306 conserved NMD3 protein which in S. cerevisiae is involved in the nuclear export of the large ribosomal subunitDDB0232429 CDS129822 1593 - 0.323917
nol1 DDB_G0281685 possible RNA methyltransferase ortholog of H. sapiens NOL1 and S. cerevisiae NOP2DDB0232430 CDS4810538 1944 - 0.326646
nol5a DDB_G0285679 ortholog of H. sapiens NOL5A and S. cerevisiae SIK1 SIK1 is a component of the box CD snoRNP complex involved in rRNA processingDDB0232431 CDS3582121 1623 + 0.325323
nola1 DDB_G0279013 component of the HACA small nucleolar ribonucleoprotein (HACA snoRNP) complex required for pre-mRNA processing and pseudouridylationDDB0232430 CDS1514463 693 + 0.47619
nola2 DDB_G0289699 component of the HACA small nucleolar ribonucleoprotein (HACA snoRNP) complex required for pre-mRNA processing and pseudouridylationDDB0232432 CDS3120417 435 + 0.303448
nola3 DDB_G0288347 component of the HACA small nucleolar ribonucleoprotein (HACA snoRNP) complex required for pre-mRNA processing and pseudouridylationDDB0232432 CDS1416040 195 + 0.323077
nola4 DDB_G0281933 ortholog of human DKC1 (DysKeratosis Congenita 1) and yeast CBF5 (Centromere Binding Factor 5) component of the HACA small nucleolar ribonucleoprotein (HACA snoRNP) complex required for pre-mRNA processing and pseudouridylationDDB0232430 CDS5161271 1623 - 0.370302
nop58 DDB_G0268098 ortholog of human and S. pombe nucleolar protein 58 members of this family are involved in a variety of functions during pre-mRNA splicingDDB0232428 CDS1450677 1917 - 0.344288
ola1 DDB_G0268758 belongs to the RAS-like GTPase superfamily ortholog of human OLA1DDB0232428 CDS2048942 1182 + 0.315567
phesA DDB_G0287141 catalyzes the reaction ATP L-phenylalanine tRNAPhe AMP diphosphate L-phenylalanyl-tRNAPhe in S. cerevisiae acts as a tetramer composed of two alpha and two beta subunitsDDB0232431 CDS5374001 1464 + 0.295082
phesB DDB_G0277303 catalyzes the reaction ATP L-phenylalanine tRNAPhe AMP diphosphate L-phenylalanyl-tRNAPhe in S. cerevisiae acts as a tetramer composed of two alpha and two beta subunitsDDB0232429 CDS7623909 1854 - 0.302589
pop4 DDB_G0288543 DDB0232432 CDS1668067 759 - 0.258235
pop5 DDB_G0291662 DDB0232433 CDS281774 516 - 0.24031
prfA DDB_G0283175 required for the termination of protein biosynthesis class I release factors bind to ribosomes that have encountered a stop codon at their decoding site and induce release of the nascent polypeptide mediates UAA and UAG-dependent termination in prokaryotesDDB0232431 CDS360952 1293 + 0.329466
prfB DDB_G0288835 required for the termination of protein biosynthesis class I release factors bind to ribosomes that have encountered a stop codon at their decoding site and induce release of the nascent polypeptide mediates UAA and UGA-dependent termination in prokaryotesDDB0232432 CDS2047432 1275 + 0.28549
prlA DDB_G0282361 DDB0232430 CDS5825075 1158 + 0.358377
proS DDB_G0284197 catalyzes the reaction ATP L-proline tRNAPro AMP diphosphate L-prolyl-tRNAProDDB0232431 CDS1680128 1647 + 0.375228
prpf31 DDB_G0289595 component of the U4U6-U5 snRNP complex defects in human PRPF31 are the cause of retinitis pigmentosa 11 (RP11)DDB0232432 CDS2984110 1383 - 0.295734
pus1 DDB_G0290987 ortholog of S. cerevisiae PUS1a tRNA:pseudouridine synthase that introduces pseudouridines at positions 26-28 34-36 65 and 67 of tRNA nuclear protein that appears to be involved in tRNA export also acts on U2 snRNADDB0232432 CDS4857087 1791 - 0.289224
pus3 DDB_G0288909 similar to S. cerevisiae pus3 which introduces pseudouridines at position 38 or 39 in tRNADDB0232432 CDS2110038 1476 + 0.25271
qtrt1 DDB_G0291802 catalyzes the reaction [tRNA]-guanine queuine [tRNA]-queuine guanineDDB0232433 CDS770747 1344 - 0.385417
rab_ps2 DDB_G0275101 putative pseudogene Rab family proteinDDB0232429 CDS5064677 321 - 0.286604
rlp24 DDB_G0272789 ortholog of the mammalian C15orf15 gene and the S. cerevisiae RLP24 protein which is involved in the biogenesis of the 60S ribosomal subunit and at the end of biogenesis is likely to be exchanged for its ribosomal homologue rpl24DDB0232429 CDS2178487 495 - 0.290909
rpl10 DDB_G0288273 DDB0232432 CDS1312496 654 - 0.408257
rpl10a DDB_G0276871 DDB0232429 CDS7540396 654 + 0.382263
rpl11 DDB_G0279189 DDB0232430 CDS1766422 609 - 0.403941
rpl12 DDB_G0288295 DDB0232432 CDS1359447 501 + 0.411178
rpl13 DDB_G0291870 DDB0232433 CDS852689 630 + 0.420635
rpl13a DDB_G0275881 DDB0232429 CDS5876511 564 + 0.423759
rpl14 DDB_G0277975 DDB0232430 CDS87206 474 + 0.413502
rpl15-1 DDB_G0272893 protein component of the large (60S) ribosomal subunit there is a second copy of this gene DDB0232429 CDS2395262 618 - 0.435275
rpl15-2 DDB_G0273983 protein component of the large (60S) ribosomal subunitthere is a second copy of this gene DDB0232429 CDS3635653 618 + 0.435275
rpl17 DDB_G0285277 DDB0232431 CDS3049805 543 + 0.412523
rpl18 DDB_G0279997 DDB0232430 CDS2837555 546 + 0.380952
rpl18a DDB_G0285881 DDB0232431 CDS3775456 516 + 0.395349
rpl19 DDB_G0281565 DDB0232430 CDS4825161 561 + 0.4082
rpl21 DDB_G0279387 DDB0232430 CDS1751733 483 - 0.434783
rpl23 DDB_G0290315 DDB0232432 CDS3946402 411 - 0.420925
rpl23a DDB_G0293502 DDB0232433 CDS2967908 510 + 0.4
rpl24 DDB_G0280229 DDB0232430 CDS3141943 384 + 0.393229
rpl26 DDB_G0283741 DDB0232431 CDS1048980 420 + 0.390476
rpl27 DDB_G0271298 DDB0232429 CDS140424 435 - 0.425287
rpl27a DDB_G0292388 DDB0232433 CDS1592145 447 - 0.411633
rpl3 DDB_G0291862 protein component of the large (60S) ribosomal subunit ribosomal protein L3 homologDDB0232433 CDS954736 1197 - 0.404344
rpl30 DDB_G0270380 DDB0232428 CDS4730345 339 - 0.362832
rpl31 DDB_G0279061 DDB0232430 CDS1578225 336 - 0.407738
rpl32 DDB_G0271976 DDB0232429 CDS1095789 402 + 0.405473
rpl34 DDB_G0286389 DDB0232431 CDS4400738 369 - 0.365854
rpl35 DDB_G0288349 DDB0232432 CDS1418812 381 - 0.39895
rpl35a DDB_G0270424 DDB0232428 CDS4849685 318 + 0.389937
rpl36 DDB_G0271668 DDB0232429 CDS733224 318 - 0.399371
rpl36a DDB_G0270984 DDB0232428 CDS3772004 312 + 0.394231
rpl37 DDB_G0285971 DDB0232431 CDS3886590 276 + 0.42029
rpl37A DDB_G0281093 DDB0232430 CDS4045953 276 + 0.431159
rpl39 DDB_G0302511 DDB0232432 CDS657459 156 - 0.333333
rpl4 DDB_G0277803 protein component of the large (60S) ribosomal subunit ribosomal protein L4 homologDDB0232429 CDS8431684 1110 + 0.443243
rpl5 DDB_G0278539 protein component of the large (60S) ribosomal subunit ribosomal protein L5 homologDDB0232430 CDS1039561 879 - 0.416382
rpl6 DDB_G0292460 protein component of the large (60S) ribosomal subunit ribosomal protein L6 homologDDB0232433 CDS1676096 711 + 0.410689
rpl7 DDB_G0276441 DDB0232429 CDS6956284 741 - 0.395412
rpl7a DDB_G0277629 protein component of the large (60S) ribosomal subunit ribosomal protein L7a homologDDB0232429 CDS8280728 858 - 0.405594
rpl8 DDB_G0274113 protein component of the large (60S) ribosomal subunit ribosomal protein L8 homologDDB0232429 CDS4593609 768 - 0.440104
rpl9 DDB_G0278959 protein component of the large (60S) ribosomal subunit ribosomal protein L9 homologDDB0232430 CDS1387306 567 - 0.368607
rplP0 DDB_G0286501 DDB0232431 CDS4590677 918 - 0.418301
rplP1 DDB_G0277907 DDB0232430 CDS1026839 342 + 0.453216
rplP2 DDB_G0283393 DDB0232431 CDS661727 321 - 0.485981
rplp1B DDB_G0287995 DDB0232432 CDS942400 303 + 0.475248
rps10 DDB_G0286117 protein component of the small (40S) ribosomal subunit highly expressed in vegetative cells and in early developmentDDB0232431 CDS4072416 465 - 0.415054
rps11 DDB_G0282601 protein component of the small (40S) ribosomal subunit ribosomal protein S11 homologDDB0232430 CDS5991308 468 + 0.40812
rps12 DDB_G0284237 protein component of the small (40S) ribosomal subunit ribosomal protein S12 homologDDB0232431 CDS1729814 411 - 0.413625
rps13 DDB_G0284533 protein component of the small (40S) ribosomal subunit ribosomal protein S13 homologDDB0232431 CDS2127182 456 - 0.388158
rps14 DDB_G0291526 protein component of the small (40S) ribosomal subunit ribosomal protein S14 homologDDB0232433 CDS481211 459 - 0.444444
rps15 DDB_G0285561 protein component of the small (40S) ribosomal subunit ribosomal protein S15 homologDDB0232431 CDS3385002 435 + 0.402299
rps15a DDB_G0276457 protein component of the small (40S) ribosomal subunit ribosomal protein S15a homologDDB0232429 CDS6809160 393 + 0.391858
rps16 DDB_G0284093 protein component of the small (40S) ribosomal subunit ribosomal protein S16 homologDDB0232431 CDS1558362 444 + 0.387387
rps17 DDB_G0290141 protein component of the small (40S) ribosomal subunit ribosomal protein S17 homologDDB0232432 CDS3706333 408 + 0.377451
rps18 DDB_G0276415 protein component of the small (40S) ribosomal subunit ribosomal protein S18 homologDDB0232429 CDS6891141 465 + 0.382796
rps19 DDB_G0279207 protein component of the small (40S) ribosomal subunit ribosomal protein S19 homologDDB0232430 CDS1760514 447 + 0.434004
rps2 DDB_G0293742 protein component of the small (40S) ribosomal subunit expressed in vegetative cells and in prestalk cells during culminationDDB0232433 CDS3277669 798 + 0.45614
rps20 DDB_G0278429 protein component of the small (40S) ribosomal subunit ribosomal protein S20 homologDDB0232430 CDS871775 375 - 0.405333
rps23 DDB_G0272250 protein component of the small (40S) ribosomal subunit ribosomal protein S23 homologDDB0232429 CDS1373618 432 + 0.416667
rps24 DDB_G0275473 protein component of the small (40S) ribosomal subunit ribosomal protein S24 homologDDB0232429 CDS6089719 381 - 0.406824
rps25 DDB_G0271148 protein component of the small (40S) ribosomal subunit ribosomal protein S25 homologDDB0232429 CDS133239 333 - 0.399399
rps26 DDB_G0281677 protein component of the small (40S) ribosomal subunit ribosomal protein S26 homologDDB0232430 CDS4801949 339 - 0.430678
rps27 DDB_G0277635 protein component of the small (40S) ribosomal subunit ribosomal protein S27 homologDDB0232429 CDS8305176 258 + 0.406977
rps28 DDB_G0285597 protein component of the small (40S) ribosomal subunit ribosomal protein S28 homologDDB0232431 CDS3428530 219 - 0.429224
rps29 DDB_G0272308 protein component of the small (40S) ribosomal subunit ribosomal protein S29 homologDDB0232429 CDS1258878 168 + 0.446429
rps3 DDB_G0293000 DDB0232433 CDS2556040 657 - 0.418569
rps3a DDB_G0277345 DDB0232429 CDS7795600 822 + 0.417275
rps4 DDB_G0272825 protein component of the small (40S) ribosomal subunit highly expressed in vegetative cells and in early developmentDDB0232429 CDS2019070 804 - 0.422886
rps5 DDB_G0286075 DDB0232431 CDS4031568 573 + 0.418848
rps6 DDB_G0280823 DDB0232430 CDS1442353 711 + 0.419128
rps8 DDB_G0291864 DDB0232433 CDS844628 636 + 0.418239
rps9 DDB_G0289877 DDB0232432 CDS3486480 558 + 0.40681
rpsA DDB_G0270316 40S ribosomal protein SA (p40) homolog belongs to the ribosomal protein S2P family contains ribosomal protein S2 domainDDB0232428 CDS4628419 738 - 0.415989
rrs1 DDB_G0274521 ortholog of S. cerevisiae RRS1 an essential protein that binds ribosomal protein L11 and is required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis mouse homolog shows altered expression in Huntington's disease model miceDDB0232429 CDS4289980 954 - 0.303983
rsmJ DDB_G0279305 DDB0232430 CDS1907472 579 + 0.219344
sbds DDB_G0272324 orthlog of the human SBDS protein which is mutated in a majority of patients with Shwachman-Bodian-Diamond syndrome localizes to the pseudopodia in cAMP gradientDDB0232429 CDS1287157 825 + 0.299394
serS DDB_G0272660 catalyzes the reaction ATP L-serine tRNASer AMP diphosphate L-seryl-tRNASerDDB0232429 CDS2243539 1356 + 0.343658
tfb1m DDB_G0286199 DDB0232431 CDS4166229 1458 - 0.268176
thrS1 DDB_G0288267 catalyzes the reaction ATP L-threonine tRNAThr AMP diphosphate L-threonyl-tRNAThrDDB0232432 CDS1320046 2133 - 0.33849
thrS2 DDB_G0274545 catalyzes the reaction ATP L-threonine tRNAThr AMP diphosphate L-threonyl-tRNAThrDDB0232429 CDS4202893 2097 - 0.251311
tifA DDB_G0269192 similar to eukaryotic initiation factor 4A isoform 3DDB0232428 CDS3537960 1218 + 0.316092
trmt61 DDB_G0271512 ortholog of the human TRM61 and yeast GCD14 which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA as a heterodimer with DDB0232429 CDS468500 939 + 0.286475
trmu DDB_G0288979 catalyzes the reaction: S-adenosyl-L-methionine tRNA S-adenosyl-L-homocysteine tRNA containing 5-methylaminomethyl-2-thiouridylateDDB0232432 CDS2201638 1356 + 0.266962
trpS DDB_G0269454 catalyzes the reaction ATP L-tryptophan tRNATrp AMP diphosphate L-tryptophan-tRNAThrDDB0232428 CDS2807320 1203 - 0.296758
tsfm DDB_G0286399 DDB0232431 CDS4409316 1068 + 0.305243
tsnax DDB_G0284837 ortholog of human TSNAX interacts with translin (TSN) may be involved in RNA metabolismDDB0232431 CDS2473632 855 - 0.247953
tufM DDB_G0289593 mitochondrial translation elongation factor Tu highly similar to bacterial elongation factor TuDDB0232432 CDS2977521 1275 - 0.418039
tyrS DDB_G0276721 catalyzes the reaction ATP L-Tyrosine tRNATyr AMP diphosphate L-tyrosyl-tRNATyrDDB0232429 CDS7137404 1152 - 0.326389
uap56 DDB_G0269932 conserved splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint the human ortholog (BAT1) forms a homodimer and interacts directly with DDB0232428 CDS3893359 1287 - 0.359751
ubqB DDB_G0280755 DDB0232430 CDS3722395 387 - 0.372093
ubqC DDB_G0276765 DDB0232429 CDS7198772 465 - 0.372043
valS1 DDB_G0277733 catalyzes the reaction ATP L-valine tRNAVal AMP diphosphate L-valyl-tRNAValDDB0232429 CDS8402743 3219 + 0.352594
valS2 DDB_G0288939 catalyzes the reaction ATP L-valine tRNAVal AMP diphosphate L-valyl-tRNAValDDB0232432 CDS2152189 3156 + 0.270279