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2024-05-19 16:23:18

Gene list

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COG category: Lipid transport and metabolism
Organism: Dictyostelium lacteum

Number of genes found: 184

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Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10028 DLA_11190 GLQOFTK02JL55Q CDS655711 1617 + 0.393939
g10092 DLA_11265 GLQOFTK02JL55Q CDS793666 870 + 0.342529
g10132 DLA_11315 GLQOFTK02JL55Q CDS885256 1683 + 0.330362
g10181 DLA_11374 GLQOFTK02JL55Q CDS1014209 3405 - 0.311894
g1069 DLA_01177 F4PJNLW01A00V1 CDS970180 2199 + 0.313324
g1085 DLA_01195 catalyzes the reaction CDP-choline 12-diacylglycerol CMP a phosphatidylcholine most similar to plant genes REMI mutant forms aberrant fruiting bodies see F4PJNLW01A00V1 CDS1008714 1191 + 0.311503
g1104 DLA_01220 catalyzes the reaction: 3-hydroxy-2-methylpropanoyl-CoA H2O CoA 3-hydroxy-2-methylpropanoate ortholog of the mammalian HIBCH enzyme F4PJNLW01A00V1 CDS1056585 1152 - 0.358507
g1194 DLA_11472 F4PJNLW01A00V1 CDS1287578 1254 + 0.363636
g1246 DLA_01368 F4PJNLW01A00V1 CDS1424016 1647 + 0.298118
g129 DLA_00150 contig05409_1.exp CDS297512 885 + 0.319774
g131 DLA_00152 contig05409_1.exp CDS301614 885 + 0.302825
g1327 DLA_01455 F4PJNLW01B0TO9 CDS82616 1293 + 0.398299
g1366 DLA_01498 F4PJNLW01B0TO9 CDS178526 729 - 0.323731
g143 DLA_00166 contig05409_1.exp CDS335204 2232 + 0.37052
g1579 DLA_01732 catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis almost identical to the neighboring gene F4PJNLW01B0TO9 CDS644709 894 + 0.322148
g1655 DLA_01812 highly similar to acetyl-CoA synthetase which condenses acetate and CoA to acetyl-coA F4PJNLW01B0TO9 CDS817231 2109 - 0.336178
g1739 DLA_01904 F4PJNLW01B0TO9 CDS1015738 1482 + 0.394737
g1753 DLA_01917 belongs to the thiolase family similar to human ACAA1F4PJNLW01B3KKL CDS7999 1212 + 0.344059
g180 DLA_00207 contig05409_1.exp CDS417343 1845 - 0.337127
g1851 DLA_11509 F4PJNLW01CH19P CDS24205 876 + 0.319635
g1857 DLA_02026 F4PJNLW01CH19P CDS34078 1398 - 0.270386
g1886 DLA_02058 F4PJNLW01CH19P CDS90672 1686 - 0.332147
g1973 DLA_02163 F4PJNLW01DERRH CDS215110 1011 - 0.327399
g2009 DLA_02207 F4PJNLW01DERRH CDS301351 3474 + 0.312032
g2021 DLA_02220 F4PJNLW01DERRH CDS328795 1659 + 0.373116
g2087 DLA_02294 ortholog of human FA2H S. cerevisiae SCS7 contains a cytochrome b5 heme-binding domain and 4 predicted transmembrane domainsF4PJNLW01DERRH CDS460608 1053 - 0.297246
g2088 DLA_02295 very similar to acyl-coenzyme A oxidases but lacks the full domainF4PJNLW01DERRH CDS462405 2049 + 0.312347
g2135 DLA_02351 F4PJNLW01DERRH CDS577253 1275 - 0.376471
g2191 DLA_02412 F4PJNLW01DERRH CDS692195 1149 - 0.280244
g2197 DLA_02418 F4PJNLW01DL4V0 CDS3136 921 - 0.324647
g2249 DLA_02486 F4PJNLW01EE5MJ CDS107128 1710 - 0.380702
g2313 DLA_02557 F4PJNLW01EE5MJ CDS273651 1254 + 0.358852
g2363 DLA_02613 F4PJNLW01EE5MJ CDS364580 621 - 0.289855
g2413 DLA_02674 catalyzes the reaction acyl-CoA Osub2sub trans-23-dehydroacyl-CoA Hsub2subOsub2sub expressed in pstAB cells and in upper cup during culminationF4PJNLW01EE5MJ CDS475903 1905 - 0.342782
g2414 DLA_02675 catalyzes the reaction: acyl-CoA 12-diacylglycerol CoA triacylglycerol similar to mammalian DGAT1 contains 9 predicted transmembrane domainsF4PJNLW01EE5MJ CDS478140 1689 + 0.328005
g2487 DLA_02758 F4PJNLW01EE5MJ CDS666600 420 - 0.330952
g2513 DLA_02787 F4PJNLW01EE5MJ CDS719586 828 - 0.345411
g2582 DLA_02865 belongs to the acyltransferase superfamily contains 2 predicted transmembrane domainsF4PJNLW01EE5MJ CDS874026 1086 - 0.331492
g2613 DLA_11532 F4PJNLW01EE5MJ CDS956438 558 - 0.299283
g2661 DLA_02954 belongs to the short chain dehydrogenasesreductases family ortholog of human HSD17B10 which is involved in mitochondrial tRNA maturation and by interacting with intracellular amyloid-beta may contribute to the neuronal dysfunction associated with Alzheimer disease F4PJNLW01EE5MJ CDS1053508 780 + 0.384615
g2771 DLA_03069 F4PJNLW02GJ9ZB CDS38713 2556 - 0.353678
g2870 DLA_03181 catalyzes the reaction ATP HCOsub3subsup-sup propionyl-CoA ADP phosphate D-methylmalonyl-CoAF4PJNLW02GJ9ZB CDS264109 2022 - 0.37636
g295 DLA_00327 contig05409_1.exp CDS680157 1872 + 0.293803
g2960 DLA_03281 F4PJNLW02HBBIY CDS191999 420 - 0.304762
g2988 DLA_03310 F4PJNLW02HBBIY CDS247385 1254 + 0.359649
g3063 DLA_03390 F4PJNLW02HBBIY CDS426670 852 - 0.327465
g3103 DLA_03435 precursor of SDF-2 similar to diazepam binding inhibitor enriched in prespore cellsF4PJNLW02HBBIY CDS497870 255 - 0.380392
g3104 DLA_03436 catalyzes the reaction ATP 3-methylcrotonoyl-CoA HCOsub3subsup-sup ADP phosphate 3-methylglutaconyl-CoAF4PJNLW02HBBIY CDS498605 3723 - 0.348375
g3187 DLA_03533 GAOABQK02FRRQV CDS101138 1380 - 0.341304
g3297 DLA_03648 MBOAT family protein membrane proteins that contains a variety of acyltransferase enzymes contains 8 predicted transmembrane domainsGAOABQK02G6SYV CDS159826 1374 - 0.299854
g3362 DLA_03718 GAOABQK02G6SYV CDS291195 753 + 0.337317
g3365 DLA_03721 GAOABQK02G6SYV CDS293942 1500 + 0.337333
g3371 DLA_03727 GAOABQK02G6SYV CDS314663 1830 + 0.345902
g3410 DLA_03770 GAOABQK02G6SYV CDS387012 558 + 0.415771
g3482 DLA_03857 GAOABQK02G6SYV CDS553761 1065 - 0.33615
g3534 DLA_03913 GAOABQK02G6SYV CDS682530 1821 - 0.344316
g3573 DLA_03957 GAOABQK02G7M1S CDS83998 852 + 0.255869
g3602 DLA_03993 GAOABQK02G7M1S CDS153817 1245 + 0.286747
g3629 DLA_04024 GAOABQK02G7M1S CDS214433 1974 + 0.377913
g3649 DLA_04046 GAOABQK02G7M1S CDS262530 3594 - 0.328603
g3978 DLA_04408 GAOABQK02GQAQJ CDS250730 489 - 0.321063
g4082 DLA_04525 GAOABQK02GQAQJ CDS482239 897 - 0.322185
g410 DLA_00455 contig05409_1.exp CDS935846 741 + 0.337382
g4101 DLA_04546 GAOABQK02GQAQJ CDS520839 1074 - 0.342644
g4108 DLA_04554 GAOABQK02GQAQJ CDS534500 795 + 0.289308
g413 DLA_00458 contig05409_1.exp CDS942679 849 + 0.322733
g4141 DLA_04590 GAOABQK02GQAQJ CDS594576 1932 - 0.365942
g4147 DLA_04595 GAOABQK02GQAQJ CDS607095 1614 + 0.348203
g4187 DLA_04632 GAOABQK02GQAQJ CDS690956 1743 - 0.343087
g4305 DLA_04752 GAOABQK02GQAQJ CDS960673 1929 - 0.371695
g4404 DLA_04868 GAOABQK02GRIAE CDS136633 1623 + 0.371534
g4461 DLA_04940 GAOABQK02H81I9 CDS33421 1080 - 0.281481
g4495 DLA_04977 catalyzes the reaction ATP a long-chain carboxylic acid CoA AMP diphosphate an acyl-CoAGAOABQK02H81I9 CDS116081 1728 + 0.337384
g4542 DLA_05033 GAOABQK02H81I9 CDS239017 447 - 0.33557
g4572 DLA_11611 GAOABQK02H81I9 CDS298550 3153 + 0.330796
g46 DLA_00055 very similar to the H. sapiens PISD a mitochondrial proenzyme that is cleaved into a phosphatidylserine decarboxylase alpha and beta chain contains one putative transmembrane domaincontig05409_1.exp CDS124344 1062 + 0.3371
g4622 DLA_05119 GAOABQK02H81I9 CDS420860 1371 + 0.36178
g4637 DLA_05134 introduces a double bond at the delta position of fatty acids during the biosynthesis of monounsaturated fatty acids there is a second copy of this gene GAOABQK02H81I9 CDS453330 2007 + 0.290982
g4642 DLA_05140 GAOABQK02H81I9 CDS466100 1581 + 0.392789
g4664 DLA_05162 GAOABQK02H81I9 CDS516119 2649 + 0.333333
g4665 DLA_05163 GAOABQK02H81I9 CDS518915 4089 + 0.344828
g4727 DLA_05233 ortholog of QDPR which catalyzes the NADH-mediated reduction of quinonoid dihydrobiopterin (a 5678-tetrahydropteridine NAD(P) a 67-dihydropteridine NAD(P)H H) the last step of tetrahydrobiopterin (BH4) recycling in higher eukaryotes an essential cofactorGAOABQK02H81I9 CDS660832 693 - 0.382395
g4810 DLA_05327 GAOABQK02H81I9 CDS862921 1608 - 0.341418
g4847 DLA_05366 GAOABQK02HUB3S CDS47127 969 - 0.338493
g4899 DLA_05423 GAOABQK02HUB3S CDS176252 405 + 0.325926
g4978 DLA_05511 GAOABQK02HUB3S CDS350528 3336 - 0.344125
g5053 DLA_11632 catalyzes the reaction ATP HCOsub3subsup-sup propionyl-CoA ADP phosphate D-methylmalonyl-CoAGAOABQK02HUB3S CDS513803 2064 - 0.380814
g5173 DLA_05739 GAOABQK02HUB3S CDS818651 996 + 0.315261
g5252 DLA_05829 GAOABQK02HUB3S CDS1034819 933 - 0.316184
g5267 DLA_05845 GAOABQK02HUB3S CDS1064384 897 - 0.352285
g530 DLA_00583 contig05409_1.exp CDS1212352 2052 - 0.332846
g5356 DLA_05959 GAOABQK02HUB3S CDS1288437 1143 + 0.31846
g5408 DLA_06018 GAOABQK02HUB3S CDS1407794 828 + 0.311594
g5489 DLA_06119 catalyzes the reaction CDP-choline 12-diacylglycerol CMP a phosphatidylcholineGAOABQK02HUB3S CDS1586206 1185 - 0.342616
g5493 DLA_06122 GAOABQK02HUB3S CDS1593918 3222 + 0.346058
g5502 DLA_06133 GAOABQK02HUB3S CDS1616160 888 + 0.353604
g5524 DLA_06155 cytochrome b5 is a membrane bound hemoprotein that functions as an electron carrier for several membrane bound oxygenases contains a single C-terminal transmembrane domainGAOABQK02HUB3S CDS1677051 330 + 0.321212
g5571 DLA_06208 GAOABQK02HUB3S CDS1790422 891 + 0.309764
g5625 DLA_06271 GAOABQK02IBA3P CDS33164 2073 + 0.312108
g579 DLA_00640 contig05409_1.exp CDS1318963 909 - 0.326733
g5796 DLA_06463 belongs to the thiolase family similar to human ACAA1GAOABQK02IBA3P CDS461596 1260 - 0.399206
g5816 DLA_06488 GAOABQK02IBA3P CDS502384 864 + 0.30787
g5914 DLA_06590 GAOABQK02IBA3P CDS731425 1725 + 0.327536
g5949 DLA_06628 GAOABQK02IBA3P CDS821083 732 - 0.319672
g596 DLA_00657 contig05409_1.exp CDS1359869 804 + 0.330846
g5962 DLA_11662 ortholog of the conserved COQ10 a Coenzyme Q (ubiquinone) binding protein in S. cerevisiae there is a second copy of this gene GAOABQK02IBA3P CDS843020 645 - 0.333333
g6068 DLA_06754 GAOABQK02IBA3P CDS1091884 1239 - 0.351897
g6075 DLA_06762 GAOABQK02IBA3P CDS1112301 1005 + 0.262687
g6086 DLA_06774 GAOABQK02INHKB CDS19513 852 + 0.338028
g6196 DLA_06907 GAOABQK02IO52T CDS244624 1221 - 0.314496
g6197 DLA_06908 GAOABQK02IO52T CDS246045 954 - 0.272537
g6238 DLA_06951 GAOABQK02IO52T CDS326148 726 + 0.319559
g6283 DLA_06997 GAOABQK02IO52T CDS427854 981 + 0.377166
g6288 DLA_07002 GAOABQK02IO52T CDS437914 1413 + 0.319887
g6305 DLA_07021 conserved eukaryotic kinase (human MVK yeast ERG12) that plays a role in the synthesis of isopentanyl pyrophosphate a common intermediate in pathways including cholesterol biosynthesisGAOABQK02IO52T CDS470082 1155 + 0.341991
g6317 DLA_07036 homolog of human HMGCS1 catalyzes the reaction acetyl-CoA H2O acetoacetyl-CoA (S)-3-hydroxy-3-methylglutaryl-CoA CoA contains a predicted peroxisomal targeting signalGAOABQK02IO52T CDS495479 1401 + 0.356888
g6327 DLA_07047 underexpressed in GAOABQK02IO52T CDS524724 888 + 0.337838
g6328 DLA_07048 GAOABQK02IO52T CDS525873 879 + 0.336746
g6490 DLA_07225 GAOABQK02JEBFV CDS34277 1305 + 0.300383
g6644 DLA_07400 GAOABQK02JOCCH CDS337771 756 - 0.37963
g6717 DLA_07482 GAOABQK02JOCCH CDS490199 2037 - 0.361807
g6731 DLA_07497 GAOABQK02JOCCH CDS527724 1686 - 0.281139
g6735 DLA_07501 GAOABQK02JOCCH CDS534441 861 - 0.341463
g6761 DLA_07531 GAOABQK02JOCCH CDS603442 267 + 0.322097
g6844 DLA_07628 GAOABQK02JOCCH CDS790410 2037 - 0.305842
g6862 DLA_07650 GAOABQK02JOCCH CDS828753 1836 - 0.351307
g703 DLA_00776 F4PJNLW01A00V1 CDS151130 1470 + 0.364626
g7075 DLA_07895 GLQOFTK02FH5TG CDS441355 3612 + 0.357143
g7148 DLA_07978 GLQOFTK02FH5TG CDS587193 2544 + 0.355739
g7195 DLA_08029 homolog of human HMGCS1 catalyzes the reaction acetyl-CoA H2O acetoacetyl-CoA (S)-3-hydroxy-3-methylglutaryl-CoA CoA contains a predicted peroxisomal targeting signalGLQOFTK02FH5TG CDS701909 1398 - 0.389127
g7212 DLA_08048 GLQOFTK02FH5TG CDS731330 741 - 0.390013
g729 DLA_00802 F4PJNLW01A00V1 CDS212215 1983 + 0.348462
g7329 DLA_08191 GLQOFTK02FH5TG CDS1004800 1815 - 0.352617
g7380 DLA_08253 GLQOFTK02FH5TG CDS1118900 423 + 0.323877
g7411 DLA_08286 GLQOFTK02FH5TG CDS1213731 1203 + 0.334996
g7417 DLA_08293 GLQOFTK02FH5TG CDS1225700 1260 + 0.375397
g7503 DLA_08395 GLQOFTK02FH5TG CDS1422203 1176 + 0.37415
g7517 DLA_08412 GLQOFTK02FH5TG CDS1455062 906 - 0.315673
g7526 DLA_08420 GLQOFTK02FH5TG CDS1469302 2112 + 0.358428
g7540 DLA_08434 catalyzes the reaction: CTP phosphatidate diphosphate CDP-diacylglycerol provides CDP-diacylglycerol an important precursor for the synthesis of phospholipids contains 8 putative transmembrane domainsGLQOFTK02FH5TG CDS1495102 1347 + 0.309577
g7559 DLA_08454 GLQOFTK02FH5TG CDS1529803 975 + 0.267692
g7752 DLA_08669 GLQOFTK02G2F2O CDS447431 915 - 0.28306
g7753 DLA_08670 GLQOFTK02G2F2O CDS448934 2043 - 0.358297
g7813 DLA_08733 similar to A. thaliana short chain specific acyl-Coa oxidase ACX4 which catalyzes the first step of peroxisomal fatty acid beta-oxidationGLQOFTK02G2F2O CDS580237 1260 + 0.340476
g80 DLA_00092 contig05409_1.exp CDS183140 951 - 0.311251
g8050 DLA_08999 GLQOFTK02G2F2O CDS1102070 897 - 0.352285
g8142 DLA_09098 GLQOFTK02G2F2O CDS1342634 1581 - 0.379507
g8160 DLA_09118 GLQOFTK02G2F2O CDS1379715 2157 + 0.351414
g8205 DLA_09162 GLQOFTK02G2F2O CDS1465055 1026 - 0.318713
g8256 DLA_09217 GLQOFTK02G2F2O CDS1576594 1587 + 0.336484
g8302 DLA_09264 GLQOFTK02G2F2O CDS1682483 1542 - 0.274319
g8322 DLA_09288 GLQOFTK02G2F2O CDS1721538 837 + 0.357228
g8377 DLA_09344 GLQOFTK02G2F2O CDS1821038 591 - 0.351946
g8399 DLA_09368 GLQOFTK02G2F2O CDS1857156 342 - 0.342105
g8450 DLA_09422 GLQOFTK02G2F2O CDS1965361 1293 + 0.317092
g8478 DLA_09451 homolog of human Sphk1 phosphorylates sphinganine to sphinganine 1-phosphateGLQOFTK02G2F2O CDS2029787 1752 + 0.31621
g8690 DLA_09686 very similar to the H. sapiens PISD a mitochondrial proenzyme that is cleaved into a phosphatidylserine decarboxylase alpha and beta chain contains one putative transmembrane domainGLQOFTK02GHM7A CDS472847 1269 + 0.321513
g8784 DLA_09784 GLQOFTK02GHM7A CDS671036 1572 - 0.363232
g8797 DLA_09801 GLQOFTK02GHM7A CDS702072 3678 + 0.329799
g8971 DLA_09993 GLQOFTK02GQ36N CDS252069 840 + 0.34881
g8972 DLA_09994 GLQOFTK02GQ36N CDS253220 861 + 0.307782
g8973 DLA_09995 GLQOFTK02GQ36N CDS254501 858 + 0.317016
g9099 DLA_10130 GLQOFTK02GQ36N CDS543431 3165 - 0.366193
g9110 DLA_10141 GLQOFTK02GQ36N CDS571144 1098 - 0.346995
g9149 DLA_10189 GLQOFTK02GQ36N CDS655472 837 - 0.354839
g9166 DLA_10209 GLQOFTK02GUKFG CDS27469 1284 + 0.378505
g9211 DLA_10262 GLQOFTK02GUKFG CDS134644 849 + 0.319199
g9268 DLA_10326 GLQOFTK02GUKFG CDS287774 3000 + 0.333
g9318 DLA_10385 catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis almost identical to the neighboring gene GLQOFTK02GUKFG CDS392617 792 - 0.344697
g9451 DLA_10531 GLQOFTK02IIOHN CDS102553 1290 - 0.272093
g947 DLA_01046 F4PJNLW01A00V1 CDS696119 843 - 0.329775
g9576 DLA_10675 GLQOFTK02IJPNF CDS216499 1107 + 0.268293
g958 DLA_01061 F4PJNLW01A00V1 CDS726071 399 - 0.278196
g9580 DLA_10681 GLQOFTK02IJPNF CDS225672 912 + 0.384868
g9582 DLA_10683 GLQOFTK02IJPNF CDS228054 1320 - 0.393182
g9618 DLA_11825 GLQOFTK02IRMR1 CDS38641 1596 - 0.346491
g9650 DLA_10762 GLQOFTK02IRMR1 CDS114914 897 + 0.311037
g9651 DLA_10763 GLQOFTK02IRMR1 CDS116295 897 + 0.322185
g9761 DLA_10896 GLQOFTK02JL55Q CDS59863 855 - 0.308772
g9765 DLA_11830 GLQOFTK02JL55Q CDS70794 612 - 0.330065
g9823 DLA_10963 GLQOFTK02JL55Q CDS199771 906 + 0.333333
g9953 DLA_11102 catalyzes the reaction ATP a long-chain carboxylic acid CoA AMP diphosphate an acyl-CoA mediates the retrieval of fatty acids from endosomes to the cytoplasmGLQOFTK02JL55Q CDS503773 1995 + 0.381955
g9990 DLA_11144 GLQOFTK02JL55Q CDS568126 1911 - 0.349032
g9997 DLA_11154 introduces a double bond at the delta position of fatty acids during the biosynthesis of monounsaturated fatty acids there is a second copy of this gene GLQOFTK02JL55Q CDS586002 2256 + 0.370567