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2024-05-19 17:20:32

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Polysphondylium pallidum, PN500

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10157 PPL_10687 EXOLTKG01B86TH-3_part2 CDS791433 2166 - 0.382271
g10230 PPL_13602 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisEXOLTKG01B86TH-3y_part1 CDS101814 954 - 0.436059
g10345 PPL_10895 EXOLTKG01B86TH-3y_part1 CDS433930 2070 - 0.457488
g10581 PPL_11164 PN500-F-W-a08d11.p658-5_part2 CDS49513 1272 + 0.440252
g10601 PPL_11185 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisPN500-F-W-a08d11.p658-5_part2 CDS109463 957 + 0.434692
g10880 PPL_11485 PN500-F-W-a08d11.p658-5_part2 CDS908393 4044 - 0.465134
g1100 PPL_01276 DPPA0061d07.r1-5 CDS1159657 570 - 0.415789
g11009 PPL_11756 PN500-G-d-72b01.r1-5 CDS52683 1008 + 0.444444
g11020 PPL_11771 PN500-G-d-72b01.r1-5 CDS88930 714 - 0.417367
g11080 PPL_11834 PN500-G-d-72b01.r1-5 CDS276966 1386 - 0.483405
g11300 PPL_11563 PN500-G-d-188d09.r1-5 CDS59757 735 - 0.368707
g1249 PPL_01458 catalyzes the reaction CDP-choline 12-diacylglycerol CMP a phosphatidylcholineDPPA0090b03.f1-3_x_part2 CDS188566 2562 + 0.400468
g1403 PPL_01619 DPPA0090b03.f1-3_x_part3 CDS261674 762 - 0.452756
g1594 PPL_01827 DPPA0090b03.f1-3_x_part3 CDS782911 1344 - 0.424851
g1625 PPL_01861 DPPA0090b03.f1-3_x_part3 CDS881381 1131 + 0.394341
g1655 PPL_01895 similar to H. sapiens CECR1 protein (Swiss Prot Q9NZK5)DPPA0090b03.f1-3_x_part3 CDS948308 1545 - 0.352751
g1686 PPL_01926 DPPA0090b03.f1-3_x_part3 CDS1020533 1329 + 0.373965
g1786 PPL_02029 DPPA0090b03.f1-3_x_part3 CDS1322474 2475 - 0.43596
g1808 PPL_02049 DPPA0090b03.f1-3_x_part3 CDS1379378 639 - 0.386541
g1829 PPL_02075 DPPA0090b03.f1-3_x_part3 CDS1444784 1500 - 0.339333
g1890 PPL_02145 catalyzes the reaction UMP diphosphate uracil 5-phospho-alpha-D-ribose 1-diphosphateDPPA0090b03.f1-3_x_part3 CDS1649100 657 - 0.385084
g2365 PPL_02672 homolog of human and S. cerevisiae KTI12 (killer toxin insensitivity protein 12) S. cerevisiae KTI12 interacts with the Elongator complex a component of the elongating form of RNA polymerase II DPPA0090b03.f1-3_y_part1 CDS259954 660 - 0.393939
g2399 PPL_02705 catalyzes the reaction N-D-ribosylpurine Hsub2subO purine D-riboseDPPA0090b03.f1-3_y_part1 CDS346410 987 + 0.374873
g2562 PPL_02882 DPPA0090b03.f1-3_y_part1 CDS778990 525 - 0.32381
g2581 PPL_02904 DPPA0090b03.f1-3_y_part1 CDS828186 660 + 0.369697
g2924 PPL_03282 DPPA0090b03.f1-3_y_part1 CDS1783006 426 + 0.403756
g3131 PPL_03549 catalyzes the reaction AMP pyrophosphate PRPP adenine in nucleoside salvage pathwaysDPPA0255d09.f1-5 CDS16621 600 - 0.428333
g3583 PPL_04051 DPPB0337b12.r1-5 CDS1019641 1764 - 0.465986
g3620 PPL_04089 DPPB0337b12.r1-5 CDS1113775 1341 + 0.416107
g3802 PPL_04295 DPPB0360e11.f1-5 CDS314852 783 - 0.472542
g4353 PPL_04916 E0KFERV02EE9X2-3_part1 CDS907323 1116 - 0.474014
g461 PPL_00588 DPPA0004F08.r1-5_part2 CDS1346673 654 - 0.420489
g4726 PPL_13181 E3JQK7F01EFZL8-5 CDS269843 672 - 0.360119
g4967 PPL_13202 E3JQK7F01EFZL8-5 CDS941777 936 + 0.370726
g5082 PPL_05730 E3JQK7F01EFZL8-5 CDS1251577 564 - 0.381206
g5121 PPL_05767 multifunctional enzyme that carries out the three first enzymatic activities of the de novo pyrimidine biosynthetic pathway very similar to the tri-functional human CAD enzymeE3JQK7F01EFZL8-5 CDS1350382 6570 - 0.477321
g5137 PPL_05784 E3JQK7F01EFZL8-5 CDS1408621 870 + 0.329885
g5367 PPL_06022 E3JQK7F02G10GF-5 CDS595533 1350 - 0.403704
g5413 PPL_06072 E3JQK7F02G10GF-5 CDS716156 867 - 0.454441
g5552 PPL_06217 E3JQK7F02HEVRT-5 CDS22769 2970 - 0.420539
g5935 PPL_13289 ortholog of human FHIT which is a possible tumor suppressor for specific tissues numerous tumor types are associated with aberrant forms of human FHIT proteinE3JQK7F02HW0LE-5_part2 CDS142084 492 + 0.384146
g6149 PPL_06873 E3JQK7F02HW0LE-5_part2 CDS724537 1332 - 0.414414
g6309 PPL_07049 E3JQK7F02HW0LE-5_part2 CDS1187044 1437 - 0.454419
g6431 PPL_07192 E3JQK7F02HW0LE-5_part2 CDS1550140 573 - 0.397906
g6537 PPL_07306 E3JQK7F02HW0LE-5_part2 CDS1830095 606 - 0.379538
g6738 PPL_07542 EVG8W8Q01EEF2G-5 CDS37257 513 + 0.378168
g7325 PPL_13396 EVG8W8Q02J3HU6-3_part3 CDS337922 744 - 0.346774
g7353 PPL_08201 EVG8W8Q02J3HU6-3_part3 CDS399692 624 + 0.341346
g7565 PPL_08456 bifunctional enzyme that catalyzes the reactions Nsup10sup-formyl-Hsub4subF AICAR tetrahydrofolate phosphoribosyl-formamido-carboxamide and phosphoribosyl-formamido-carboxamide IMP Hsub2subO expressed in prespore cellsEVG8W8Q02J3HU6-3_part3 CDS1007225 1593 - 0.482109
g7618 PPL_08516 EVG8W8Q02J3HU6-3_part3 CDS1159929 741 + 0.395412
g7626 PPL_08523 EVG8W8Q02J3HU6-3_part3 CDS1177841 2607 - 0.475259
g7633 PPL_08529 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisEVG8W8Q02J3HU6-3_part3 CDS1195939 957 + 0.347962
g7732 PPL_08638 EVKQ3GG01CS5PZ-3_part1 CDS242615 2409 + 0.479037
g7820 PPL_08740 EVKQ3GG01CS5PZ-3_part1 CDS490039 1926 - 0.535306
g7896 PPL_08826 EVKQ3GG01CS5PZ-3_part1 CDS727882 465 - 0.550538
g7902 PPL_08831 catalyzes the reaction ATP uridine ADP UMPEVKQ3GG01CS5PZ-3_part1 CDS743623 282 + 0.432624
g7910 PPL_08840 EVKQ3GG01CS5PZ-3_part1 CDS763999 546 - 0.421245
g7958 PPL_08895 catalyzes the reaction N10-formyl-Hsub4subF 5-phospho-ribosyl-glycineamide tetrahydrofolate 5'-phosphoribosyl-N-formylglycineamide in de novo DNA synthesisEVKQ3GG01CS5PZ-3_part1 CDS947321 645 - 0.393798
g8015 PPL_08958 contains a N-terminal uridine kinase domaine domain and a C-terminal adenylate cyclase domain like the UdkC protein and other plant proteinsEVKQ3GG01CS5PZ-3_part1 CDS1115932 1596 - 0.364662
g8059 PPL_08999 EVKQ3GG01CS5PZ-3_part1 CDS1216451 972 + 0.395062
g8218 PPL_09163 EVKQ3GG01CS5PZ-3_part1 CDS1653763 4041 - 0.386538
g8239 PPL_09188 EVKQ3GG01CS5PZ-3_part1 CDS1717559 744 - 0.435484
g8299 PPL_09259 EVKQ3GG01CS5PZ-3_part2 CDS28093 669 - 0.460389
g8377 PPL_09342 EVKQ3GG01CS5PZ-3_part2 CDS235509 942 + 0.468153
g8489 PPL_12098 catalyzes the reaction Hsub2subO allantoin allantoate expressed in upper cup cells during culminationEVKQ3GG01DOIJB_part1 CDS168779 1944 + 0.449074
g8513 PPL_12130 EVKQ3GG01DOIJB_part1 CDS248227 2232 + 0.409946
g8830 PPL_12473 EVKQ3GG01DOIJB_part2 CDS304019 1053 - 0.433048
g8832 PPL_12475 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearEVKQ3GG01DOIJB_part2 CDS308398 900 + 0.38
g9096 PPL_13517 EVKQ3GG02I325Y-5_part1 CDS324301 1746 - 0.428408
g9127 PPL_09559 catalyzes the reaction ATP uridine ADP UMPEVKQ3GG02I325Y-5_part1 CDS421114 1458 - 0.406722
g9135 PPL_09564 EVKQ3GG02I325Y-5_part1 CDS440445 1395 - 0.490323
g9207 PPL_09636 catalyzes the reaction Hsub2subO dCTP - NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesEVKQ3GG02I325Y-5_part1 CDS638084 684 - 0.371345
g9335 PPL_09782 EVKQ3GG02I325Y-5_part1 CDS983039 1131 - 0.291777
g9510 PPL_09979 catalyzes the reaction L-glutamine PRPP Hsub2subO 5-phospho-beta-D-ribosyl-amine pyrophosphate L-glutamate the first step in de novo DNA synthesisEWNM59D01C4IL7-5_part1 CDS36780 1683 + 0.462864
g952 PPL_01118 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearDPPA0061d07.r1-5 CDS739667 828 + 0.461353
g9554 PPL_10034 EWNM59D01C4IL7-5_part1 CDS157222 480 + 0.333333
g9581 PPL_10057 EWNM59D01C4IL7-5_part1 CDS226457 1335 - 0.465169
g9699 PPL_10183 EWNM59D01C4IL7-5_part1 CDS570904 1524 + 0.511811
g9961 PPL_10489 EXOLTKG01B86TH-3_part2 CDS187713 771 - 0.396887