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2024-05-19 17:03:55

Gene list

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COG category: Amino acid transport and metabolism
Organism: Dictyostelium lacteum

Number of genes found: 153

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Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10073 DLA_11246 GLQOFTK02JL55Q CDS753430 957 + 0.329154
g10159 DLA_11349 GLQOFTK02JL55Q CDS944120 1290 + 0.378295
g10161 DLA_11351 GLQOFTK02JL55Q CDS946168 1590 + 0.348428
g10182 DLA_11376 GLQOFTK02JL55Q CDS1018236 1665 + 0.303303
g1019 DLA_01129 F4PJNLW01A00V1 CDS867408 1245 - 0.349398
g10220 DLA_11416 newcontig00824_1.exp CDS52538 1158 + 0.294473
g10230 DLA_11426 catalyzes the reaction oxaloacetate L-glutamate L-aspartate newcontig00824_1.exp CDS73044 1311 - 0.361556
g1099 DLA_01215 F4PJNLW01A00V1 CDS1038454 1191 - 0.345088
g1135 DLA_01252 F4PJNLW01A00V1 CDS1139362 1332 - 0.36036
g1209 DLA_01329 F4PJNLW01A00V1 CDS1321589 1302 - 0.390169
g1304 DLA_01428 F4PJNLW01B0TO9 CDS32748 1299 + 0.362587
g135 DLA_00156 contig05409_1.exp CDS311305 1410 - 0.36383
g1393 DLA_01529 catalyzes the reaction oxaloacetate L-glutamate L-aspartate F4PJNLW01B0TO9 CDS232161 1260 + 0.39127
g1554 DLA_01702 catalyzes the reaction 4-hydroxyphenylpyruvate Osub2sub homogentisate COsub2sub there is a second copy of this gene F4PJNLW01B0TO9 CDS597042 1377 + 0.337691
g1572 DLA_01725 peptidase M20 family zinc metallopeptidases which are glutamate carboxypeptidases contains peptidase dimerization domainF4PJNLW01B0TO9 CDS631266 1419 - 0.338971
g1690 DLA_01850 F4PJNLW01B0TO9 CDS903564 1080 + 0.350926
g1694 DLA_01855 F4PJNLW01B0TO9 CDS911905 2013 + 0.34774
g1756 DLA_01920 F4PJNLW01BNQ9D CDS2025 2088 - 0.305556
g19 DLA_00021 contig05409_1.exp CDS48189 1287 - 0.301476
g1900 DLA_02072 F4PJNLW01DERRH CDS20262 1929 + 0.352514
g1932 DLA_02114 F4PJNLW01DERRH CDS119843 1809 + 0.368712
g198 DLA_00223 contig05409_1.exp CDS465626 1779 - 0.362563
g2033 DLA_02234 catalyzes the reaction L-arginine Hsub2subO L-citrulline NHsub3sub N-terminal half highly similar to bacterial argnine deiminase an amidinotransferaseF4PJNLW01DERRH CDS357152 2469 + 0.356825
g2203 DLA_02424 F4PJNLW01DL4V0 CDS11101 2979 + 0.302115
g2222 DLA_02449 F4PJNLW01EE5MJ CDS49018 1320 - 0.368182
g2248 DLA_02485 F4PJNLW01EE5MJ CDS105506 1389 - 0.362131
g2292 DLA_02534 F4PJNLW01EE5MJ CDS225419 1422 - 0.362166
g2320 DLA_02566 F4PJNLW01EE5MJ CDS284500 1374 - 0.36754
g2336 DLA_02584 F4PJNLW01EE5MJ CDS316180 1230 - 0.321138
g2417 DLA_02678 catalyzes the reaction isocitrate NAD 2-oxoglutarate CO2 NADHF4PJNLW01EE5MJ CDS482810 1047 - 0.372493
g2450 DLA_02720 F4PJNLW01EE5MJ CDS565066 2763 + 0.338762
g2541 DLA_02815 F4PJNLW01EE5MJ CDS779152 1344 - 0.338542
g2686 DLA_02981 F4PJNLW01EE5MJ CDS1106577 735 - 0.315646
g271 DLA_00301 contig05409_1.exp CDS628909 1554 + 0.348777
g2746 DLA_11537 F4PJNLW02G7WH6 CDS1527 1446 - 0.329184
g2750 DLA_03045 F4PJNLW02G7WH6 CDS8506 1951 + 0.307535
g2776 DLA_03073 F4PJNLW02GJ9ZB CDS48650 3747 - 0.363491
g2832 DLA_03135 F4PJNLW02GJ9ZB CDS161521 1932 - 0.297101
g2850 DLA_03156 involved in regulation of inositol (145) trisphosphate levelsF4PJNLW02GJ9ZB CDS205856 2190 + 0.310502
g2891 DLA_03205 F4PJNLW02HBBIY CDS40341 816 - 0.28799
g2907 DLA_03222 catalyzes the reaction ATP L-glutamate ammonia ADP phosphate L-glutamineF4PJNLW02HBBIY CDS72788 1494 + 0.314592
g2908 DLA_03223 F4PJNLW02HBBIY CDS74419 1467 + 0.314928
g2934 DLA_03250 F4PJNLW02HBBIY CDS121491 3333 - 0.357336
g307 DLA_00342 similar to histidine ammonia-lyase which catalyzes the reaction L-histidine urocanate NHsub3sub there is a second copy of this gene contig05409_1.exp CDS709746 1596 - 0.305138
g3209 DLA_03557 GAOABQK02FWKR3 CDS20867 1314 + 0.266362
g3296 DLA_03647 GAOABQK02G6SYV CDS158561 1182 + 0.335871
g3439 DLA_03803 catalyzes the reaction S-adenosyl-L-methionine 1-aminocyclopropane-1-carboxylate methylthioadenosineGAOABQK02G6SYV CDS464213 1305 - 0.310345
g3622 DLA_04015 GAOABQK02G7M1S CDS194635 6603 - 0.377707
g3672 DLA_04069 catalyzes the reaction 3-phospho-hydroxypyruvate L-glutamate 2-oxoglutarate 3-phospho-serineGAOABQK02G7M1S CDS327683 1122 - 0.322638
g3703 DLA_04104 GAOABQK02G7M1S CDS396022 1254 + 0.317384
g3712 DLA_04113 GAOABQK02G7M1S CDS411453 1245 - 0.355823
g3761 DLA_04166 GAOABQK02G7M1S CDS506791 1362 - 0.35022
g3786 DLA_04198 GAOABQK02G7M1S CDS571410 3756 - 0.390841
g383 DLA_00426 contig05409_1.exp CDS877599 1206 + 0.349917
g3842 DLA_04260 GAOABQK02G7M1S CDS705335 2826 - 0.363411
g3939 DLA_04368 similar to diaminopimelate decarboxylase which catalyzes the reaction meso-26-diaminoheptanedioate L-lysine COsub2subGAOABQK02GQAQJ CDS159687 1287 + 0.351204
g3988 DLA_11587 GAOABQK02GQAQJ CDS275173 1140 + 0.347368
g3993 DLA_04428 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGAOABQK02GQAQJ CDS282706 957 - 0.3814
g4026 DLA_04466 belongs to the drugmetabolite transporter (DMT) superfamily similar to D. melanogaster sll human SLC35B2 contains 8 predicted transmembrane domainsGAOABQK02GQAQJ CDS363647 1137 - 0.373791
g4028 DLA_04468 catalyzes the reaction: N-acyl-L-amino acid H2O carboxylate L-amino acid (EC 3.5.1.14)GAOABQK02GQAQJ CDS366755 1248 + 0.371795
g4222 DLA_04669 GAOABQK02GQAQJ CDS763149 1296 + 0.328704
g423 DLA_00469 contig05409_1.exp CDS957371 1476 + 0.382114
g4297 DLA_04743 catalyzes the reaction L-proline NAD(P)supsup 1-pyrroline-5-carboxylate NAD(P)H HsupsupGAOABQK02GQAQJ CDS939860 1536 + 0.343099
g4409 DLA_04874 GAOABQK02GRIAE CDS149654 1803 + 0.380477
g4430 DLA_04899 catalyzes the reaction cystathionine Hsub2subO 2-oxobutanoate L-cysteine NHsub3subGAOABQK02GRIAE CDS194004 1152 + 0.377604
g4442 DLA_04916 GAOABQK02GRIAE CDS218825 1521 + 0.365549
g4516 DLA_05006 catalyzes the reaction L-methylmalonyl-CoA D-methylmalonyl-CoAGAOABQK02H81I9 CDS168523 498 - 0.299197
g4631 DLA_05128 GAOABQK02H81I9 CDS443410 1434 - 0.341702
g5013 DLA_05552 GAOABQK02HUB3S CDS422006 1698 + 0.375147
g5083 DLA_05628 GAOABQK02HUB3S CDS586125 855 - 0.353216
g5133 DLA_05685 GAOABQK02HUB3S CDS703693 3501 - 0.350757
g5288 DLA_05869 GAOABQK02HUB3S CDS1129286 1221 + 0.352989
g5299 DLA_05886 GAOABQK02HUB3S CDS1153628 1752 + 0.333333
g5313 DLA_05905 GAOABQK02HUB3S CDS1185974 1605 + 0.340187
g5509 DLA_06140 conserved peptidase M20 family zinc metallopeptidases which are glutamate carboxypeptidases contains peptidase dimerization domainGAOABQK02HUB3S CDS1631814 1527 - 0.35167
g5573 DLA_06210 GAOABQK02HUB3S CDS1792010 990 - 0.318182
g5582 DLA_06222 GAOABQK02HUB3S CDS1808930 2490 - 0.300803
g5612 DLA_06257 GAOABQK02IBA3P CDS4134 1986 + 0.330312
g5644 DLA_06290 GAOABQK02IBA3P CDS78894 1023 + 0.29521
g5726 DLA_06385 GAOABQK02IBA3P CDS296684 1692 - 0.353428
g573 DLA_00633 catalyzes the reaction isocitrate NAD 2-oxoglutarate CO2 NADHcontig05409_1.exp CDS1312355 1092 + 0.387363
g5760 DLA_06424 sulfurates the molybdenum cofactor which is essential for xanthine dehydrogenase and aldehyde oxidase defects in the human MOCOS cause xanthinuria type II (XU-II)GAOABQK02IBA3P CDS384204 2544 + 0.342767
g5777 DLA_06443 GAOABQK02IBA3P CDS418948 1335 - 0.323595
g5808 DLA_06477 GAOABQK02IBA3P CDS484395 1359 - 0.287712
g5821 DLA_06494 GAOABQK02IBA3P CDS510741 1128 + 0.340426
g5851 DLA_06526 GAOABQK02IBA3P CDS571753 1461 - 0.347023
g5872 DLA_06546 GAOABQK02IBA3P CDS607739 1356 + 0.312684
g5887 DLA_06559 GAOABQK02IBA3P CDS652072 1149 + 0.311575
g5888 DLA_06560 GAOABQK02IBA3P CDS654139 1140 + 0.317544
g5969 DLA_06647 catalyzes the reaction ATP N-acetyl-L-glutamate ADP N-acetyl-L-glutamate 5-phosphateGAOABQK02IBA3P CDS852768 2619 - 0.348988
g6138 DLA_06837 GAOABQK02IO52T CDS111590 1314 - 0.354642
g6203 DLA_06914 GAOABQK02IO52T CDS258001 2196 + 0.362022
g6320 DLA_07040 GAOABQK02IO52T CDS503740 2217 + 0.341001
g6343 DLA_07062 ortholog of S. cerevisiae URA1 and human DPYD defects in DPYD cause dihydropyrimidine dehydrogenase deficiency catalyzes the reaction 56-dihydrouracil NADP uracil NADPH HGAOABQK02IO52T CDS549158 3054 + 0.384741
g6520 DLA_07262 GAOABQK02JOCCH CDS40465 1494 - 0.321285
g66 DLA_00077 contig05409_1.exp CDS161135 1104 - 0.313406
g665 DLA_00735 F4PJNLW01A00V1 CDS65491 1167 + 0.353042
g6650 DLA_07406 GAOABQK02JOCCH CDS346876 2601 - 0.306036
g6653 DLA_07410 GAOABQK02JOCCH CDS353884 969 + 0.341589
g6724 DLA_07489 GAOABQK02JOCCH CDS507907 1743 - 0.353987
g6773 DLA_07545 GAOABQK02JOCCH CDS622703 1878 + 0.3541
g6819 DLA_07599 GAOABQK02JOCCH CDS736947 1446 + 0.379668
g6822 DLA_11690 GAOABQK02JOCCH CDS744371 1479 - 0.363759
g6867 DLA_07656 GAOABQK02JOCCH CDS842319 1398 - 0.344063
g6943 DLA_07742 belongs to the POT (proton-dependent oligopeptide transport) family contains 12 putative transmembrane domainsGLQOFTK02FH5TG CDS123038 1920 + 0.331771
g6955 DLA_07753 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGLQOFTK02FH5TG CDS148168 957 + 0.366771
g6975 DLA_07775 GLQOFTK02FH5TG CDS194059 1857 + 0.403339
g700 DLA_00773 ortholog of vitellogenic carboxypeptidase a conserved serine carboxypeptidase expressed in mosquito ovaries contains a predicted signal peptideF4PJNLW01A00V1 CDS145541 1521 - 0.332676
g7020 DLA_07825 GLQOFTK02FH5TG CDS302318 2499 - 0.341337
g7041 DLA_07852 GLQOFTK02FH5TG CDS355920 1548 + 0.339793
g7073 DLA_07893 GLQOFTK02FH5TG CDS437192 1782 + 0.360831
g7101 DLA_07928 GLQOFTK02FH5TG CDS493642 1347 + 0.361544
g7260 DLA_08103 GLQOFTK02FH5TG CDS844783 2106 + 0.347578
g7262 DLA_08106 GLQOFTK02FH5TG CDS848935 1452 - 0.365014
g7452 DLA_08335 GLQOFTK02FH5TG CDS1293598 1518 + 0.296443
g7551 DLA_08445 GLQOFTK02FH5TG CDS1518238 1248 - 0.298077
g7584 DLA_08484 GLQOFTK02G2F2O CDS44418 1671 + 0.333333
g7609 DLA_08513 GLQOFTK02G2F2O CDS99678 1227 - 0.360228
g7625 DLA_08529 highly similar to mammalian puromycin-sensitive aminopeptidase belonging to the peptidase M1 family (metallopeptidases) contains a peptidase M1 domain including a zinc-binding siteGLQOFTK02G2F2O CDS139243 2667 - 0.347957
g7643 DLA_08546 GLQOFTK02G2F2O CDS183857 1197 - 0.355054
g7734 DLA_08651 GLQOFTK02G2F2O CDS415454 1563 - 0.370441
g7746 DLA_08661 GLQOFTK02G2F2O CDS433203 2652 + 0.334465
g7803 DLA_08722 GLQOFTK02G2F2O CDS563464 2481 + 0.347844
g7829 DLA_08752 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGLQOFTK02G2F2O CDS621182 1023 + 0.319648
g7871 DLA_08802 GLQOFTK02G2F2O CDS699340 3039 - 0.303389
g8091 DLA_09042 GLQOFTK02G2F2O CDS1201457 1188 + 0.349327
g8098 DLA_09051 GLQOFTK02G2F2O CDS1217994 1659 - 0.374925
g8131 DLA_09086 GLQOFTK02G2F2O CDS1319801 1362 + 0.360499
g8234 DLA_09194 GLQOFTK02G2F2O CDS1535183 2334 + 0.393316
g8251 DLA_09213 GLQOFTK02G2F2O CDS1569720 1044 - 0.332375
g8288 DLA_09249 GLQOFTK02G2F2O CDS1649732 444 + 0.31982
g8375 DLA_09342 GLQOFTK02G2F2O CDS1816908 1617 - 0.372913
g8386 DLA_09353 GLQOFTK02G2F2O CDS1835892 1062 + 0.356874
g8408 DLA_09377 GLQOFTK02G2F2O CDS1870716 1308 + 0.315749
g845 DLA_00925 F4PJNLW01A00V1 CDS453911 4515 - 0.341085
g8507 DLA_11776 catalyzes the reaction L-serine pyruvate NHsub3subGLQOFTK02GHM7A CDS36898 1047 + 0.346705
g853 DLA_00933 catalyzes the reaction Nsub2sub-acetyl-L-ornithine 2-oxoglutarate N-acetyl-L-glutamate 5-semialdehyde L-glutamateF4PJNLW01A00V1 CDS481206 1332 - 0.354354
g8607 DLA_09600 catalyzes the reaction homocysteine L-serine Hsub2subO cystathionineGLQOFTK02GHM7A CDS278164 1494 + 0.382865
g8933 DLA_11797 catalyzes the degradation of GABA :4-aminobutanoate 2-oxoglutarate succinate semialdehyde L-glutamate null mutant has a very mild developmental delay GLQOFTK02GQ36N CDS167369 1491 - 0.366197
g9010 DLA_10032 catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids there is a second copy of this gene GLQOFTK02GQ36N CDS334864 1017 + 0.346116
g9062 DLA_10086 GLQOFTK02GQ36N CDS432012 2025 - 0.364444
g9131 DLA_10166 GLQOFTK02GQ36N CDS614694 2004 - 0.353293
g9308 DLA_10376 GLQOFTK02GUKFG CDS375001 1371 + 0.384391
g9398 DLA_10477 catalyzes the reactoin L-tryptophan Osub2sub L-formylkynurenineGLQOFTK02IIIWT CDS2230 1197 - 0.288221
g95 DLA_00110 contig05409_1.exp CDS221480 1122 + 0.335116
g9660 DLA_10773 peptidase M20 family zinc metallopeptidases which are glutamate carboxypeptidases contains peptidase dimerization domainGLQOFTK02IRMR1 CDS145134 1428 - 0.37465
g9723 DLA_10854 GLQOFTK02JCFFB CDS96576 1644 + 0.350365
g9738 DLA_10871 GLQOFTK02JL55Q CDS3263 1593 - 0.323917
g9774 DLA_10908 GLQOFTK02JL55Q CDS89227 3039 - 0.367884
g9845 DLA_10989 GLQOFTK02JL55Q CDS250366 1527 + 0.316306
g9876 DLA_11024 catalyzes the reaction L-asparagine Hsub2subO L-aspartate NHsub3subGLQOFTK02JL55Q CDS326188 1128 + 0.35195
g9881 DLA_11028 GLQOFTK02JL55Q CDS334040 3078 + 0.393762
g9928 DLA_11075 GLQOFTK02JL55Q CDS432211 1164 - 0.358247