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2024-05-19 14:50:50

Gene list

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COG category: Chromatin structure and dynamics
Organism: Dictyostelium lacteum

Number of genes found: 54

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g1089 DLA_01201 F4PJNLW01A00V1 CDS1020294 3582 + 0.357063
g1237 DLA_01360 component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4F4PJNLW01A00V1 CDS1403767 405 + 0.407407
g1299 DLA_01423 F4PJNLW01B0TO9 CDS21081 1455 - 0.316838
g1457 DLA_01600 F4PJNLW01B0TO9 CDS378823 483 - 0.397516
g152 DLA_00177 contains a MOZSAS-like domain (Monocytic leukemia Zinc fingerSomething About Silencing) predicted to have histone acetyltransferase activitycontig05409_1.exp CDS357019 1254 - 0.349282
g1784 DLA_01947 nuclear protein and ortholog of yeast SNF12 and human SMARCD1 that are involved in chromatin remodeling there is a second copy of this gene F4PJNLW01C9MXC CDS41999 1413 - 0.322718
g1997 DLA_02192 F4PJNLW01DERRH CDS277503 753 + 0.337317
g2332 DLA_02579 F4PJNLW01EE5MJ CDS308501 2493 + 0.30365
g2380 DLA_02635 F4PJNLW01EE5MJ CDS401669 4497 + 0.381143
g2488 DLA_02759 F4PJNLW01EE5MJ CDS667342 6816 + 0.359008
g2534 DLA_02808 F4PJNLW01EE5MJ CDS761715 4392 - 0.346084
g2602 DLA_02887 F4PJNLW01EE5MJ CDS934016 3438 - 0.357475
g2824 DLA_03127 F4PJNLW02GJ9ZB CDS146833 2541 - 0.245179
g2942 DLA_03260 F4PJNLW02HBBIY CDS138381 11952 + 0.347808
g3503 DLA_03881 GAOABQK02G6SYV CDS609301 6957 - 0.323559
g3807 DLA_04222 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasGAOABQK02G7M1S CDS617133 4275 - 0.349942
g411 DLA_00456 component of the condensin I complex required for conversion of interphase chromatin into mitotic condensed chromosomescontig05409_1.exp CDS936869 4455 + 0.318294
g4351 DLA_04808 GAOABQK02GQAQJ CDS1082463 7581 + 0.303258
g4683 DLA_05184 GAOABQK02H81I9 CDS559866 1626 - 0.346248
g5070 DLA_05615 GAOABQK02HUB3S CDS553749 6030 - 0.315091
g5105 DLA_05654 GAOABQK02HUB3S CDS641462 1251 - 0.341327
g5121 DLA_05671 GAOABQK02HUB3S CDS678704 1239 + 0.326877
g5285 DLA_05866 GAOABQK02HUB3S CDS1120661 2448 - 0.330474
g560 DLA_00616 contig05409_1.exp CDS1278889 1833 + 0.357338
g5675 DLA_06322 GAOABQK02IBA3P CDS154496 3345 + 0.339611
g5915 DLA_06591 GAOABQK02IBA3P CDS733421 1188 - 0.309764
g6263 DLA_06977 GAOABQK02IO52T CDS377430 3825 - 0.324444
g6342 DLA_07061 component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4GAOABQK02IO52T CDS548163 414 + 0.39372
g6372 DLA_07092 GAOABQK02IO52T CDS614911 2685 + 0.347114
g6433 DLA_07159 GAOABQK02JBK0O CDS45121 2970 - 0.306734
g6607 DLA_07358 GAOABQK02JOCCH CDS240004 12681 - 0.328365
g6686 DLA_07446 GAOABQK02JOCCH CDS428514 2859 - 0.317943
g6711 DLA_07474 GAOABQK02JOCCH CDS471109 7059 - 0.374982
g6917 DLA_07714 GLQOFTK02FH5TG CDS67516 1473 - 0.325187
g7058 DLA_07874 GLQOFTK02FH5TG CDS397075 2931 - 0.293074
g7098 DLA_07924 GLQOFTK02FH5TG CDS489001 2274 + 0.317942
g7724 DLA_08642 GLQOFTK02G2F2O CDS383694 4512 - 0.359043
g7822 DLA_08745 GLQOFTK02G2F2O CDS605989 1704 - 0.363263
g7833 DLA_08756 similar to S. cerevisiae nonhistone chromosomal protein 6A and B (NCP6A and NCP6B) and mammalian HMGB2 contains a single HMG12 boxGLQOFTK02G2F2O CDS627361 447 - 0.369128
g7964 DLA_08899 GLQOFTK02G2F2O CDS907053 468 + 0.316239
g8292 DLA_11767 GLQOFTK02G2F2O CDS1657691 744 + 0.330645
g8469 DLA_09442 GLQOFTK02G2F2O CDS2014170 309 - 0.38835
g8470 DLA_09443 one of two identical H4 proteins (other is GLQOFTK02G2F2O CDS2015054 309 + 0.375405
g856 DLA_00936 F4PJNLW01A00V1 CDS484234 2835 - 0.31358
g8593 DLA_09585 GLQOFTK02GHM7A CDS246755 4185 + 0.314934
g8679 DLA_09676 GLQOFTK02GHM7A CDS445403 2091 - 0.345289
g8687 DLA_09683 GLQOFTK02GHM7A CDS465515 3981 + 0.363728
g880 DLA_00964 F4PJNLW01A00V1 CDS550332 1758 - 0.344141
g881 DLA_00965 similar to H. sapiens SWISNF subunit SMARCC1 and the yeast subunit SWI3 of the chromatin remodeling complexF4PJNLW01A00V1 CDS552489 3174 + 0.331758
g9098 DLA_10129 putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase rasGLQOFTK02GQ36N CDS538065 4770 - 0.341719
g9210 DLA_10261 GLQOFTK02GUKFG CDS129499 4644 + 0.343239
g9445 DLA_10523 GLQOFTK02IIOHN CDS85920 4386 + 0.332421
g963 DLA_01066 F4PJNLW01A00V1 CDS736130 7947 - 0.317227
g970 DLA_01079 F4PJNLW01A00V1 CDS759689 1269 + 0.332545