Gene list
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COG category: Chromatin structure and dynamics
Organism: Polysphondylium pallidum, PN500
Number of genes found: 60
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Polysphondylium pallidum, PN500 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
g10019 | PPL_10545 | EXOLTKG01B86TH-3_part2 | CDS | 361931 | 4890 | - | 0.358896 | |
g10303 | PPL_10857 | EXOLTKG01B86TH-3y_part1 | CDS | 346255 | 2988 | - | 0.380522 | |
g10372 | PPL_10927 | EXOLTKG01B86TH-3y_part2 | CDS | 45836 | 1686 | + | 0.42586 | |
g10643 | PPL_11229 | PN500-F-W-a08d11.p658-5_part2 | CDS | 213021 | 7863 | + | 0.389419 | |
g10921 | PPL_11525 | PN500-F-W-a08d11.p658-5_part2 | CDS | 1045416 | 486 | - | 0.495885 | |
g11047 | PPL_11799 | PN500-G-d-72b01.r1-5 | CDS | 173824 | 4362 | + | 0.392481 | |
g11147 | PPL_11905 | component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4 | PN500-G-d-72b01.r1-5 | CDS | 474699 | 408 | - | 0.492647 |
g11227 | PPL_11981 | PN500-G-d-72b01.r1-5 | CDS | 675127 | 6036 | + | 0.376574 | |
g1145 | PPL_01333 | putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase ras | DPPA0061d07.r1-5 | CDS | 1285022 | 4272 | - | 0.422285 |
g1281 | PPL_01491 | DPPA0090b03.f1-3_x_part2 | CDS | 292465 | 321 | - | 0.47352 | |
g1334 | PPL_01546 | DPPA0090b03.f1-3_x_part3 | CDS | 66698 | 768 | + | 0.423177 | |
g1577 | PPL_01811 | DPPA0090b03.f1-3_x_part3 | CDS | 744780 | 2742 | + | 0.393873 | |
g1722 | PPL_01958 | DPPA0090b03.f1-3_x_part3 | CDS | 1118226 | 4608 | + | 0.463108 | |
g1743 | PPL_12869 | DPPA0090b03.f1-3_x_part3 | CDS | 1197602 | 4467 | + | 0.419521 | |
g1985 | PPL_02243 | DPPA0090b03.f1-3_x_part3 | CDS | 1927047 | 3198 | - | 0.449343 | |
g2121 | PPL_02394 | DPPA0090b03.f1-3_x_part3 | CDS | 2315397 | 828 | - | 0.375604 | |
g2129 | PPL_02403 | DPPA0090b03.f1-3_x_part3 | CDS | 2344831 | 1254 | - | 0.396332 | |
g2626 | PPL_02958 | DPPA0090b03.f1-3_y_part1 | CDS | 956311 | 3333 | - | 0.449745 | |
g2841 | PPL_03196 | DPPA0090b03.f1-3_y_part1 | CDS | 1564628 | 3561 | + | 0.450435 | |
g3133 | PPL_03551 | DPPA0255d09.f1-5 | CDS | 19894 | 3450 | - | 0.432464 | |
g3161 | PPL_03583 | DPPA0255d09.f1-5 | CDS | 102611 | 2166 | + | 0.39566 | |
g3390 | PPL_03843 | DPPB0337b12.r1-5 | CDS | 486215 | 2184 | + | 0.396062 | |
g3415 | PPL_03870 | contains a MOZSAS-like domain (Monocytic leukemia Zinc fingerSomething About Silencing) predicted to have histone acetyltransferase activity | DPPB0337b12.r1-5 | CDS | 536426 | 1362 | - | 0.4163 |
g3650 | PPL_04124 | component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4 | DPPB0337b12.r1-5 | CDS | 1191514 | 408 | + | 0.382353 |
g396 | PPL_00512 | DPPA0004F08.r1-5_part2 | CDS | 1151696 | 321 | + | 0.479751 | |
g4079 | PPL_04601 | similar to S. cerevisiae nonhistone chromosomal protein 6A and B (NCP6A and NCP6B) and mammalian HMGB2 contains a single HMG12 box | E0KFERV02EE9X2-3_part1 | CDS | 106023 | 408 | + | 0.465686 |
g444 | PPL_00570 | DPPA0004F08.r1-5_part2 | CDS | 1291308 | 4569 | + | 0.408186 | |
g4480 | PPL_05077 | E3JQK7F01CUWUC-3_part1 | CDS | 65008 | 1668 | - | 0.395683 | |
g462 | PPL_00589 | DPPA0004F08.r1-5_part2 | CDS | 1349273 | 3159 | + | 0.405192 | |
g4698 | PPL_05322 | E3JQK7F01EFZL8-5 | CDS | 183679 | 3570 | + | 0.39888 | |
g49 | PPL_00135 | DPPA0004F08.r1-5_part2 | CDS | 143414 | 678 | + | 0.386431 | |
g5089 | PPL_05739 | E3JQK7F01EFZL8-5 | CDS | 1266781 | 2193 | - | 0.443684 | |
g51 | PPL_00136 | DPPA0004F08.r1-5_part2 | CDS | 146451 | 648 | + | 0.390432 | |
g5213 | PPL_13222 | component of the H2A-H2B-H3-H4 histone octamer dimerizes with histone H4 | E3JQK7F02G10GF-5 | CDS | 165196 | 414 | + | 0.463768 |
g5294 | PPL_05947 | E3JQK7F02G10GF-5 | CDS | 398815 | 1212 | - | 0.445545 | |
g548 | PPL_00681 | DPPA0004F08.r1-5_part3 | CDS | 45400 | 5994 | + | 0.385385 | |
g5670 | PPL_06348 | E3JQK7F02HEVRT-5 | CDS | 383452 | 453 | + | 0.419426 | |
g5757 | PPL_13273 | E3JQK7F02HEVRT-5 | CDS | 667185 | 1431 | - | 0.379455 | |
g578 | PPL_00711 | DPPA0004F08.r1-5_part3 | CDS | 119020 | 1452 | - | 0.453168 | |
g612 | PPL_00744 | DPPA0004F08.r1-5_part3 | CDS | 217250 | 3255 | + | 0.399693 | |
g6284 | PPL_07019 | E3JQK7F02HW0LE-5_part2 | CDS | 1107265 | 2733 | - | 0.388218 | |
g6349 | PPL_07095 | E3JQK7F02HW0LE-5_part2 | CDS | 1305356 | 3666 | + | 0.355701 | |
g6552 | PPL_07326 | contains a MOZSAS-like domain (Monocytic leukemia Zinc fingerSomething About Silencing) predicted to have histone acetyltransferase activity | E3JQK7F02HW0LE-5_part2 | CDS | 1881484 | 1443 | + | 0.404712 |
g6626 | PPL_07411 | EVG8W8Q01C9YYY-5_part1 | CDS | 118381 | 1035 | + | 0.419324 | |
g670 | PPL_00807 | DPPA0004F08.r1-5_part3 | CDS | 372642 | 1557 | - | 0.390495 | |
g6714 | PPL_07515 | EVG8W8Q01C9YYY-5_part2 | CDS | 168200 | 12471 | + | 0.402614 | |
g7249 | PPL_08086 | EVG8W8Q02J3HU6-3_part3 | CDS | 111181 | 3474 | + | 0.34053 | |
g735 | PPL_00886 | DPPA0061d07.r1-5 | CDS | 98531 | 2916 | + | 0.332305 | |
g7642 | PPL_08539 | EVG8W8Q02J3HU6-3_part3 | CDS | 1213756 | 315 | + | 0.396825 | |
g7799 | PPL_08716 | EVKQ3GG01CS5PZ-3_part1 | CDS | 433935 | 459 | + | 0.350763 | |
g8005 | PPL_08948 | atypical protein kinase belongs to the PIKK family of protein kinases similar to transformationtranscription domain-associated protein (TRRAP) | EVKQ3GG01CS5PZ-3_part1 | CDS | 1078944 | 12966 | + | 0.429585 |
g8006 | PPL_08949 | EVKQ3GG01CS5PZ-3_part1 | CDS | 1092608 | 4197 | - | 0.423636 | |
g8080 | PPL_09023 | putative PI3K that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring has the capacity to bind and be activated by the GTP-bound small GTPase ras | EVKQ3GG01CS5PZ-3_part1 | CDS | 1280112 | 5025 | + | 0.416119 |
g8432 | PPL_09407 | EVKQ3GG01DB4K7-5 | CDS | 397 | 7002 | + | 0.458012 | |
g8609 | PPL_12238 | EVKQ3GG01DOIJB_part1 | CDS | 527136 | 4446 | - | 0.421502 | |
g9066 | PPL_09496 | EVKQ3GG02I325Y-5_part1 | CDS | 226115 | 2016 | - | 0.452381 | |
g9436 | PPL_09893 | EVKQ3GG02I325Y-5_part1 | CDS | 1323159 | 2460 | - | 0.408943 | |
g9521 | PPL_09994 | EWNM59D01C4IL7-5_part1 | CDS | 71987 | 726 | - | 0.392562 | |
g9824 | PPL_10340 | EWNM59D01C4IL7-5_part1 | CDS | 959812 | 3849 | + | 0.376202 | |
g9826 | PPL_10342 | EWNM59D01C4IL7-5_part1 | CDS | 964362 | 3678 | + | 0.383904 |