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2024-05-19 17:33:07

Gene list

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Genomic element: contig_new08661_1.exp-5

Number of genes found: 64

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PPL_13937 tRNA-Lyscontig_new08661_1.exp-5 tRNA199135 73 + 0.616438
NA PPL_13935 tRNA-Tyrcontig_new08661_1.exp-5 tRNA169760 90 - 0.422222
NA PPL_13936 tRNA-Leucontig_new08661_1.exp-5 tRNA186019 81 + 0.493827
g11380 PPL_00001 contig_new08661_1.exp-5 CDS872 957 - 0.38349
g11381 PPL_00003 contig_new08661_1.exp-5 CDS3898 1029 + 0.414966
g11382 PPL_00004 contig_new08661_1.exp-5 CDS7083 1512 + 0.347222
g11383 PPL_00006 contig_new08661_1.exp-5 CDS11831 705 - 0.350355
g11384 PPL_00007 contig_new08661_1.exp-5 CDS12865 669 - 0.312407
g11385 PPL_00010 contig_new08661_1.exp-5 CDS16905 1140 + 0.331579
g11386 PPL_00011 contig_new08661_1.exp-5 CDS19405 1344 - 0.377976
g11387 PPL_00012 contig_new08661_1.exp-5 CDS21832 3327 + 0.380824
g11388 PPL_00013 contig_new08661_1.exp-5 CDS25719 4872 - 0.448071
g11389 PPL_00014 contig_new08661_1.exp-5 CDS32176 639 + 0.480438
g11390 PPL_00015 contig_new08661_1.exp-5 CDS33496 1698 - 0.322733
g11391 PPL_00016 contig_new08661_1.exp-5 CDS36098 3432 + 0.430653
g11392 PPL_00017 contig_new08661_1.exp-5 CDS39825 1296 - 0.334877
g11393 PPL_00018 contig_new08661_1.exp-5 CDS42460 753 - 0.535193
g11394 PPL_00019 contig_new08661_1.exp-5 CDS44457 2811 - 0.351476
g11395 PPL_00021 putative RNA helicase involved in the second step of RNA splicing ortholog of human ASCC3L1 and yeast BRR2contig_new08661_1.exp-5 CDS55323 6558 - 0.456084
g11396 PPL_00022 contig_new08661_1.exp-5 CDS62485 1770 + 0.373446
g11397 PPL_00023 contig_new08661_1.exp-5 CDS64702 1269 - 0.361702
g11398 PPL_00024 wealky similar to acid ceramidase which catalyzes the reaction N-acylsphingoside Hsub2subO a carboxylate sphingosinecontig_new08661_1.exp-5 CDS67436 1290 + 0.443411
g11399 PPL_00025 contig_new08661_1.exp-5 CDS69296 1548 + 0.372739
g11400 PPL_00026 contig_new08661_1.exp-5 CDS71244 300 - 0.393333
g11401 PPL_00027 contig_new08661_1.exp-5 CDS73163 2208 + 0.381793
g11402 PPL_13700 contig_new08661_1.exp-5 CDS76286 333 - 0.363363
g11403 PPL_00028 contig_new08661_1.exp-5 CDS76850 5406 - 0.36034
g11404 PPL_00029 contig_new08661_1.exp-5 CDS82785 5691 - 0.364962
g11405 PPL_00030 contig_new08661_1.exp-5 CDS89478 1200 - 0.469167
g11406 PPL_00031 contig_new08661_1.exp-5 CDS92241 537 - 0.394786
g11407 PPL_00032 contains a selenocysteine (U) residue at position 113 similar to animal Type III iodothyronine deiodinase (DIO3) catalyzes the reaction 33'5'-triiodo-L-thyronine iodide A H() L-thyroxine AH(2)contig_new08661_1.exp-5 CDS93358 390 - 0.348718
g11408 PPL_13701 contig_new08661_1.exp-5 CDS93918 432 - 0.388889
g11409 PPL_00033 similar to S. cerevisiae Lgs1 a putative GTPase involved in 60S ribosomal subunit biogenesiscontig_new08661_1.exp-5 CDS94718 1884 - 0.446391
g11410 PPL_00034 contig_new08661_1.exp-5 CDS97241 672 - 0.474702
g11411 PPL_00035 contig_new08661_1.exp-5 CDS98342 1149 - 0.330722
g11412 PPL_00036 contig_new08661_1.exp-5 CDS100912 1284 + 0.367601
g11413 PPL_00037 contig_new08661_1.exp-5 CDS103729 1734 - 0.353518
g11414 PPL_00038 contig_new08661_1.exp-5 CDS106387 1404 - 0.294872
g11415 PPL_00039 contig_new08661_1.exp-5 CDS109408 312 - 0.298077
g11416 PPL_00042 contig_new08661_1.exp-5 CDS112181 579 - 0.404145
g11417 PPL_00044 contig_new08661_1.exp-5 CDS113164 1542 - 0.357328
g11418 PPL_00046 contig_new08661_1.exp-5 CDS120423 3867 + 0.431084
g11419 PPL_00047 contig_new08661_1.exp-5 CDS125744 1026 - 0.346979
g11420 PPL_13702 contig_new08661_1.exp-5 CDS126952 1590 - 0.466667
g11421 PPL_00048 contig_new08661_1.exp-5 CDS130087 1560 + 0.442949
g11422 PPL_00049 contig_new08661_1.exp-5 CDS131975 1989 - 0.362996
g11423 PPL_00050 contig_new08661_1.exp-5 CDS136948 663 - 0.363499
g11424 PPL_13703 contig_new08661_1.exp-5 CDS138483 486 - 0.349794
g11425 PPL_00051 contig_new08661_1.exp-5 CDS139253 603 - 0.339967
g11426 PPL_13704 contig_new08661_1.exp-5 CDS141138 3564 + 0.372615
g11427 PPL_00052 contig_new08661_1.exp-5 CDS145361 3735 + 0.350469
g11428 PPL_00053 contig_new08661_1.exp-5 CDS149844 3720 + 0.354301
g11429 PPL_00054 contig_new08661_1.exp-5 CDS154255 3693 + 0.357433
g11430 PPL_00056 contig_new08661_1.exp-5 CDS159187 3669 + 0.358953
g11431 PPL_00057 contig_new08661_1.exp-5 CDS163336 3759 + 0.368715
g11432 PPL_00058 contig_new08661_1.exp-5 CDS168215 288 - 0.409722
g11433 PPL_00061 contig_new08661_1.exp-5 CDS170120 1068 - 0.388577
g11434 PPL_00062 contig_new08661_1.exp-5 CDS171645 6984 - 0.439576
g11435 PPL_00063 contig_new08661_1.exp-5 CDS181743 2070 - 0.484541
g11436 PPL_00064 contig_new08661_1.exp-5 CDS186864 669 + 0.406577
g11437 PPL_00065 belongs to the PLAC8 family (placenta-specific gene 8 protein) a family of cysteine-rich proteins with highly divergent low complexity amino terminal regionscontig_new08661_1.exp-5 CDS189297 333 - 0.453453
g11438 PPL_00066 contig_new08661_1.exp-5 CDS191659 2007 - 0.38565
g11439 PPL_00067 contig_new08661_1.exp-5 CDS196772 1443 - 0.311157
g11440 PPL_00069 ortholog of human WDR57 which binds PRP8 contains 7 WD40 repeatscontig_new08661_1.exp-5 CDS199354 1077 - 0.43454