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2024-05-19 12:48:04

Gene list

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Genomic element: DDB0232433

Number of genes found: 1442

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
29C DDB_G0291255 similar to DDB_G0278725 contains a predicted signal peptideDDB0232433 CDS29253 555 - 0.356757
DDB_G0291209_ps DDB_G0291209 putative pseudogene highly similar to a D. discoideum gene family including DDB0232433 CDS2814 336 - 0.330357
DDB_G0291213_RTE DDB_G0291213 ORF2 encoding reverse transcriptase (RT) and integrase (IN) proteins of long terminal repeat retrotransposon Skipper refer to AF049230 for consensus elementDDB0232433 CDS4067 939 - 0.331203
DDB_G0291215_TE DDB_G0291215 ORF1 encoding a protein of unknown function of the putative DNA transposon DDT-B refer to AF298202 for full-length consensus elementDDB0232433 CDS8948 651 + 0.222734
DDB_G0291217_RTE DDB_G0291217 ORF2 protein fragment of DIRS1 retrotransposon refer to Genbank M11339 for full-length elementDDB0232433 CDS11026 858 - 0.38345
DDB_G0291219_TE DDB_G0291219 ORF1 encoding a protein of unknown function of the putative DNA transposon DDT-B refer to AF298202 for full-length consensus elementDDB0232433 CDS10525 291 + 0.206186
DDB_G0291221_RTE DDB_G0291221 ORF1 protein of DIRS1 retrotransposon refer to Genbank M11339 for full-length elementDDB0232433 CDS1271 1008 - 0.371032
DDB_G0291223_RTE DDB_G0291223 fused fragments of the DIRS1 retrotransposon refer to Genbank M11339 for full-length elementDDB0232433 CDS6464 903 + 0.388704
DDB_G0291257_TE DDB_G0291257 ORF1 encoding a protein of unknown function of the putative DNA transposon DDT-A refer to AF298201 for full-length consensus elementDDB0232433 CDS14558 1413 - 0.225053
DDB_G0291259 DDB_G0291259 DDB0232433 CDS18892 1632 + 0.307598
DDB_G0291261 DDB_G0291261 protein conserved in bacteria and plants D. discoideum contains a second highly similar protein (DDB0232433 CDS21629 558 + 0.283154
DDB_G0291263 DDB_G0291263 DDB0232433 CDS22760 4752 + 0.258207
DDB_G0291277 DDB_G0291277 DDB0232433 CDS44334 633 - 0.306477
DDB_G0291279 DDB_G0291279 contains 11 putative transmembrane domains similar to feline leukemia virus subgroup C receptor-related proteinsDDB0232433 CDS45543 1575 + 0.333333
DDB_G0291281 DDB_G0291281 DDB0232433 CDS48286 372 + 0.282258
DDB_G0291285 DDB_G0291285 DDB0232433 CDS53775 2280 + 0.217105
DDB_G0291289 DDB_G0291289 DDB0232433 CDS59612 4179 + 0.216559
DDB_G0291299 DDB_G0291299 DDB0232433 CDS80308 1407 - 0.294243
DDB_G0291301 DDB_G0291301 at the N-terminus similar to peroxisomal sarcosine oxidases (PSO) at the C-terminus similar to L-amino-acid oxidases (LAO)DDB0232433 CDS87606 3243 + 0.362319
DDB_G0291308 DDB_G0291308 DDB0232433 CDS107010 5058 - 0.205417
DDB_G0291310 DDB_G0291310 DDB0232433 CDS112763 1143 + 0.314086
DDB_G0291314 DDB_G0291314 highly similar to plant HSP101 expressed in prespore cellsDDB0232433 CDS116087 2661 + 0.34611
DDB_G0291316 DDB_G0291316 DDB0232433 CDS118975 675 - 0.262222
DDB_G0291318 DDB_G0291318 has similarity to yeast mrp10 the mitochondrial ribosome 37 S subunit componentDDB0232433 CDS120345 276 + 0.304348
DDB_G0291322 DDB_G0291322 DDB0232433 CDS123984 2631 + 0.199164
DDB_G0291324 DDB_G0291324 DDB0232433 CDS126721 699 - 0.270386
DDB_G0291326 DDB_G0291326 DDB0232433 CDS127766 231 - 0.264069
DDB_G0291328 DDB_G0291328 DDB0232433 CDS128308 744 - 0.322581
DDB_G0291332 DDB_G0291332 DDB0232433 CDS131894 951 - 0.278654
DDB_G0291334 DDB_G0291334 DDB0232433 CDS133565 486 + 0.193416
DDB_G0291336 DDB_G0291336 DDB0232433 CDS134282 834 - 0.2494
DDB_G0291338 DDB_G0291338 DDB0232433 CDS135540 657 + 0.219178
DDB_G0291340 DDB_G0291340 DDB0232433 CDS136448 1263 - 0.346793
DDB_G0291344 DDB_G0291344 similar to butyrylcholinesterase and acetylcholinesterase precursor proteins contains a putative signal peptideDDB0232433 CDS143653 1581 + 0.29475
DDB_G0291348 DDB_G0291348 DDB0232433 CDS160343 2316 + 0.239206
DDB_G0291350 DDB_G0291350 putative protein serinethreonine kinase similar to mammalian MPSK (myristoylated and palmitoylated serinethreonine kinase) a kinase involved in transcriptional regulation and protein phosphorylation may be an intermediary in the TGF-beta signaling pathwayDDB0232433 CDS162730 1110 - 0.245045
DDB_G0291354 DDB_G0291354 DDB0232433 CDS169469 2817 - 0.270501
DDB_G0291364 DDB_G0291364 DDB0232433 CDS183283 519 + 0.368015
DDB_G0291366 DDB_G0291366 belongs to the thioredoxin family similar to A. thaliana PRXIIF (peroxiredoxin IIF) lacks redox-active cysteine compared with many homologs so may be catalytically inactiveDDB0232433 CDS184226 549 - 0.275046
DDB_G0291370 DDB_G0291370 DDB0232433 CDS192185 1206 - 0.354063
DDB_G0291374 DDB_G0291374 ortholog of the H. sapiens TEX261 (testis expressed 261) contains a putative N-terminal signal sequence and 3 to 4 additional transmembrane domainsDDB0232433 CDS199740 624 - 0.25641
DDB_G0291382 DDB_G0291382 DDB0232433 CDS224492 456 - 0.230263
DDB_G0291384 DDB_G0291384 DDB0232433 CDS226725 1878 + 0.256124
DDB_G0291386 DDB_G0291386 DDB0232433 CDS229175 1392 + 0.297414
DDB_G0291388 DDB_G0291388 DDB0232433 CDS231261 219 - 0.324201
DDB_G0291392 DDB_G0291392 similar to spore coat protein PspB expressed in prespore cellsDDB0232433 CDS246726 1407 - 0.372424
DDB_G0291394 DDB_G0291394 DDB0232433 CDS249853 921 + 0.304017
DDB_G0291396 DDB_G0291396 contains a dilute domain found at the carboxyl terminus of non-muscle myosin VDDB0232433 CDS252157 2907 + 0.257998
DDB_G0291400 DDB_G0291400 DDB0232433 CDS255522 1827 - 0.262726
DDB_G0291402 DDB_G0291402 DDB0232433 CDS257921 447 - 0.306488
DDB_G0291406 DDB_G0291406 DDB0232433 CDS260638 12408 + 0.230819
DDB_G0291408 DDB_G0291408 conserved protein in Dictyostelium fungi and bacteriaDDB0232433 CDS273229 582 - 0.28866
DDB_G0291410 DDB_G0291410 DDB0232433 CDS274574 858 + 0.30303
DDB_G0291414 DDB_G0291414 DDB0232433 CDS278393 270 + 0.266667
DDB_G0291416 DDB_G0291416 DDB0232433 CDS279007 702 - 0.270655
DDB_G0291418 DDB_G0291418 DDB0232433 CDS280209 1392 + 0.214799
DDB_G0291420 DDB_G0291420 DDB0232433 CDS286253 216 - 0.319444
DDB_G0291422 DDB_G0291422 DDB0232433 CDS286642 324 - 0.265432
DDB_G0291424 DDB_G0291424 DDB0232433 CDS289088 2709 + 0.276486
DDB_G0291426 DDB_G0291426 DDB0232433 CDS292100 870 - 0.297701
DDB_G0291428 DDB_G0291428 contains a predicted signal peptide similar to Polysphondylium pallidum 64 kDa cell surface glycoproteinDDB0232433 CDS293845 1053 + 0.303894
DDB_G0291430 DDB_G0291430 DDB0232433 CDS295544 2067 + 0.196904
DDB_G0291432 DDB_G0291432 DDB0232433 CDS297698 1665 - 0.252252
DDB_G0291436 DDB_G0291436 DDB0232433 CDS302806 1263 + 0.231987
DDB_G0291442 DDB_G0291442 DDB0232433 CDS319912 216 - 0.240741
DDB_G0291444 DDB_G0291444 DDB0232433 CDS320738 1344 + 0.287946
DDB_G0291446 DDB_G0291446 DDB0232433 CDS322306 420 - 0.214286
DDB_G0291450 DDB_G0291450 DDB0232433 CDS326534 3219 - 0.192917
DDB_G0291452 DDB_G0291452 DDB0232433 CDS330303 1851 - 0.226364
DDB_G0291462 DDB_G0291462 DDB0232433 CDS366300 1095 - 0.189954
DDB_G0291464 DDB_G0291464 DDB0232433 CDS369674 3414 - 0.289104
DDB_G0291466 DDB_G0291466 DDB0232433 CDS376634 1329 - 0.222724
DDB_G0291468 DDB_G0291468 DDB0232433 CDS378403 1608 + 0.264303
DDB_G0291470 DDB_G0291470 DDB0232433 CDS380554 1032 + 0.247093
DDB_G0291472 DDB_G0291472 DDB0232433 CDS381635 1221 - 0.290745
DDB_G0291474 DDB_G0291474 DDB0232433 CDS387688 3480 + 0.266092
DDB_G0291476 DDB_G0291476 DDB0232433 CDS396540 726 + 0.316804
DDB_G0291478 DDB_G0291478 DDB0232433 CDS405733 1263 - 0.257324
DDB_G0291480 DDB_G0291480 DDB0232433 CDS408654 1506 - 0.225764
DDB_G0291484 DDB_G0291484 DDB0232433 CDS412297 756 - 0.23545
DDB_G0291486 DDB_G0291486 similar to CUGBP proteins and Bruno-like proteins human CUGBP1 regulates splicing and translation of various RNAs contains 3 RRM domainsDDB0232433 CDS413873 1470 + 0.348299
DDB_G0291488 DDB_G0291488 DDB0232433 CDS417129 1131 - 0.177719
DDB_G0291492 DDB_G0291492 DDB0232433 CDS423677 1077 - 0.246054
DDB_G0291494 DDB_G0291494 DDB0232433 CDS430069 834 + 0.293765
DDB_G0291496 DDB_G0291496 DDB0232433 CDS435835 1074 + 0.259777
DDB_G0291508 DDB_G0291508 DDB0232433 CDS452441 150 + 0.24
DDB_G0291510 DDB_G0291510 ortholog of the human GTPase activating RapranGAP protein GARNL3 contains a Rapran-GAP domain and a citron-like domainDDB0232433 CDS452902 3096 - 0.266796
DDB_G0291516 DDB_G0291516 highly similar to DDB0232433 CDS469339 2898 + 0.277433
DDB_G0291518 DDB_G0291518 DDB0232433 CDS473275 240 + 0.225
DDB_G0291522 DDB_G0291522 DDB0232433 CDS478316 528 + 0.147727
DDB_G0291524 DDB_G0291524 very similar to human NAGA an alpha-N-acetylgalactosaminidase which catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D-galactosaminidesDDB0232433 CDS479074 1401 - 0.292648
DDB_G0291530 DDB_G0291530 DDB0232433 CDS485007 1167 + 0.238218
DDB_G0291532 DDB_G0291532 DDB0232433 CDS486511 858 + 0.244755
DDB_G0291534 DDB_G0291534 DDB0232433 CDS487852 1113 + 0.261456
DDB_G0291538 DDB_G0291538 similar to bacterial acetyltransferases homolog of E. coli maa (maltose O-acetyltransferase) contains a predicted peroxisomal targeting signalDDB0232433 CDS533329 546 + 0.322344
DDB_G0291540 DDB_G0291540 DDB0232433 CDS530842 1677 - 0.202743
DDB_G0291542_ps DDB_G0291542 putative pseudogene fragment similar to D. discoideum gene DDB0232433 CDS523707 240 - 0.191667
DDB_G0291544 DDB_G0291544 DDB0232433 CDS518857 2382 + 0.232158
DDB_G0291546 DDB_G0291546 DDB0232433 CDS515184 2898 + 0.23706
DDB_G0291548 DDB_G0291548 DDB0232433 CDS512943 1863 + 0.247987
DDB_G0291552_ps DDB_G0291552 putative pseudogene similar to D. discoideum gene DDB0232433 CDS511252 609 - 0.243021
DDB_G0291554 DDB_G0291554 DDB0232433 CDS506713 2334 + 0.340189
DDB_G0291558 DDB_G0291558 DDB0232433 CDS503745 420 - 0.202381
DDB_G0291560_ps DDB_G0291560 DDB0232433 CDS501788 585 + 0.355556
DDB_G0291564 DDB_G0291564 DDB0232433 CDS555673 147 + 0.210884
DDB_G0291572 DDB_G0291572 DDB0232433 CDS564716 1050 - 0.28
DDB_G0291574 DDB_G0291574 DDB0232433 CDS566754 732 - 0.29235
DDB_G0291576 DDB_G0291576 conserved hypothetical protein contains a putative N-terminal signal sequenceDDB0232433 CDS569331 939 + 0.217252
DDB_G0291578 DDB_G0291578 member of a small Dictyostelium gene family missing the carboxyl half compared to related proteinsDDB0232433 CDS571007 486 + 0.195473
DDB_G0291580 DDB_G0291580 DDB0232433 CDS571564 1047 + 0.221585
DDB_G0291582_ps DDB_G0291582 DDB0232433 CDS573502 492 + 0.203252
DDB_G0291586_ps DDB_G0291586 putative pseudogene very similar to a small D. discoideum gene family including DDB0232433 CDS576491 645 + 0.229457
DDB_G0291592 DDB_G0291592 DDB0232433 CDS584708 1248 + 0.252404
DDB_G0291598 DDB_G0291598 DDB0232433 CDS590338 1779 + 0.289488
DDB_G0291602 DDB_G0291602 DDB0232433 CDS594807 549 + 0.233151
DDB_G0291604 DDB_G0291604 similar to polyketide synthases but only about one third of the sizeDDB0232433 CDS595950 3030 + 0.184158
DDB_G0291608 DDB_G0291608 DDB0232433 CDS235528 2760 + 0.306522
DDB_G0291610_ps DDB_G0291610 putative pseudogene similar to a family of genes including DDB0232433 CDS426330 1116 + 0.252688
DDB_G0291612 DDB_G0291612 DDB0232433 CDS497249 1509 + 0.206759
DDB_G0291616 DDB_G0291616 DDB0232433 CDS575206 1050 + 0.214286
DDB_G0291618 DDB_G0291618 DDB0232433 CDS582226 456 - 0.208333
DDB_G0291620_RTE DDB_G0291620 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS606324 3168 - 0.348485
DDB_G0291626 DDB_G0291626 DDB0232433 CDS368247 216 - 0.157407
DDB_G0291628 DDB_G0291628 DDB0232433 CDS387018 189 + 0.243386
DDB_G0291632 DDB_G0291632 DDB0232433 CDS427952 1527 + 0.300589
DDB_G0291638 DDB_G0291638 DDB0232433 CDS476401 282 + 0.195035
DDB_G0291640 DDB_G0291640 DDB0232433 CDS496074 303 - 0.270627
DDB_G0291642_ps DDB_G0291642 putative pseudogene similar to a D. discoideum gene family including DDB0232433 CDS524418 1047 - 0.239733
DDB_G0291644 DDB_G0291644 DDB0232433 CDS526360 1560 - 0.189744
DDB_G0291646 DDB_G0291646 DDB0232433 CDS583710 390 - 0.230769
DDB_G0291650 DDB_G0291650 DDB0232433 CDS82693 3204 + 0.335206
DDB_G0291654 DDB_G0291654 DDB0232433 CDS138933 867 - 0.294118
DDB_G0291658 DDB_G0291658 DDB0232433 CDS186929 1194 + 0.278057
DDB_G0291664 DDB_G0291664 highly similar to DDB0232433 CDS338918 2880 + 0.291319
DDB_G0291670 DDB_G0291670 DDB0232433 CDS364638 1602 + 0.310861
DDB_G0291672 DDB_G0291672 DDB0232433 CDS408084 255 + 0.298039
DDB_G0291674 DDB_G0291674 similar to bacterial short-chain dehydrogenasereductase family proteins and human RDH8 (retinol dehydrogenase 8)DDB0232433 CDS431044 951 - 0.281809
DDB_G0291676 DDB_G0291676 similar to bacterial short-chain dehydrogenasereductase family proteinsDDB0232433 CDS432569 903 - 0.282392
DDB_G0291678_ps DDB_G0291678 putative pseudogene similar to DDB0232433 CDS509192 969 + 0.223942
DDB_G0291680_ps DDB_G0291680 putative pseudogene very similar to DDB0232433 CDS528420 759 + 0.225296
DDB_G0291682_ps DDB_G0291682 putative pseudogene similar to Dictyostelium genes DDB0232433 CDS533918 1101 - 0.202543
DDB_G0291686_RTE DDB_G0291686 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS599555 876 - 0.310502
DDB_G0291688_RTE DDB_G0291688 partial ORF1 and ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS601031 3405 - 0.318943
DDB_G0291692_RTE DDB_G0291692 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS610016 942 - 0.412951
DDB_G0291694 DDB_G0291694 DDB0232433 CDS613952 2553 - 0.276146
DDB_G0291696_RTE DDB_G0291696 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS611564 1335 + 0.307116
DDB_G0291700 DDB_G0291700 DDB0232433 CDS663460 2265 - 0.325386
DDB_G0291704 DDB_G0291704 DDB0232433 CDS645330 1107 - 0.265583
DDB_G0291706 DDB_G0291706 DDB0232433 CDS643919 726 + 0.274105
DDB_G0291712 DDB_G0291712 DDB0232433 CDS646777 1392 - 0.181034
DDB_G0291716 DDB_G0291716 DDB0232433 CDS726193 2322 - 0.251938
DDB_G0291718 DDB_G0291718 DDB0232433 CDS724492 1395 + 0.267384
DDB_G0291720 DDB_G0291720 DDB0232433 CDS721305 1278 - 0.311424
DDB_G0291722 DDB_G0291722 DDB0232433 CDS719367 1344 - 0.233631
DDB_G0291724_ps DDB_G0291724 putative pseudogene similar to a family of D. discoideum genes including DDB0232433 CDS718700 303 + 0.39934
DDB_G0291726 DDB_G0291726 DDB0232433 CDS716979 690 - 0.356522
DDB_G0291730 DDB_G0291730 DDB0232433 CDS712314 1374 - 0.235808
DDB_G0291732 DDB_G0291732 belongs to the NADP_Rossman superfamily similar to human NMRAL1 A. nidulans nmrA is a transcriptional regulator involved in nitrogen metabolite repressionDDB0232433 CDS711008 927 + 0.326861
DDB_G0291740 DDB_G0291740 DDB0232433 CDS678305 1125 - 0.274667
DDB_G0291742_ps DDB_G0291742 putative pseudogene similar to D. discoideum gene DDB0232433 CDS680092 480 - 0.283333
DDB_G0291744 DDB_G0291744 DDB0232433 CDS681611 3126 - 0.18682
DDB_G0291748 DDB_G0291748 DDB0232433 CDS685440 741 + 0.264507
DDB_G0291754 DDB_G0291754 DDB0232433 CDS693935 726 - 0.311295
DDB_G0291758 DDB_G0291758 DDB0232433 CDS697440 1194 + 0.273869
DDB_G0291760 DDB_G0291760 DDB0232433 CDS701991 867 + 0.283737
DDB_G0291764 DDB_G0291764 related to ribonucleotide reductase small subunit missing about 25DDB0232433 CDS704842 774 + 0.239018
DDB_G0291766 DDB_G0291766 DDB0232433 CDS707563 1053 + 0.255461
DDB_G0291768 DDB_G0291768 DDB0232433 CDS730635 1692 - 0.278369
DDB_G0291770_ps DDB_G0291770 putative pseudogene similar to D. discoideum gene DDB0232433 CDS673796 1026 - 0.287524
DDB_G0291772 DDB_G0291772 DDB0232433 CDS699835 1206 + 0.280265
DDB_G0291774 DDB_G0291774 DDB0232433 CDS703802 924 - 0.306277
DDB_G0291778 DDB_G0291778 DDB0232433 CDS709621 240 + 0.241667
DDB_G0291782 DDB_G0291782 DDB0232433 CDS739204 3027 + 0.248761
DDB_G0291784_ps DDB_G0291784 putative pseudogene similar to a small family of D. discoideum genes DDB0232433 CDS743770 1230 - 0.270732
DDB_G0291786 DDB_G0291786 DDB0232433 CDS736206 552 + 0.182971
DDB_G0291790_ps DDB_G0291790 putative pseudogene similar to D. discoideum genes DDB0232433 CDS747483 1176 + 0.244898
DDB_G0291792 DDB_G0291792 DDB0232433 CDS749614 2970 + 0.260269
DDB_G0291796 DDB_G0291796 DDB0232433 CDS757607 2541 + 0.284534
DDB_G0291798 DDB_G0291798 DDB0232433 CDS762390 3693 + 0.294611
DDB_G0291800 DDB_G0291800 GFA enzymes catalyze the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione all known members of this family contain 5 strongly conserved cysteine residuesDDB0232433 CDS768935 390 - 0.274359
DDB_G0291806 DDB_G0291806 DDB0232433 CDS777729 2871 - 0.254615
DDB_G0291808 DDB_G0291808 DDB0232433 CDS781062 2577 - 0.197128
DDB_G0291810 DDB_G0291810 DDB0232433 CDS784328 1974 - 0.346505
DDB_G0291812 DDB_G0291812 DDB0232433 CDS791270 3564 + 0.241863
DDB_G0291816 DDB_G0291816 DDB0232433 CDS805833 1002 - 0.313373
DDB_G0291818 DDB_G0291818 DDB0232433 CDS808065 1977 + 0.264036
DDB_G0291820 DDB_G0291820 DDB0232433 CDS810431 942 - 0.314225
DDB_G0291824 DDB_G0291824 DDB0232433 CDS827281 1878 - 0.300319
DDB_G0291826 DDB_G0291826 DDB0232433 CDS830929 162 + 0.388889
DDB_G0291828 DDB_G0291828 DDB0232433 CDS832120 945 - 0.262434
DDB_G0291836 DDB_G0291836 DDB0232433 CDS812338 2850 + 0.236842
DDB_G0291842 DDB_G0291842 putative protein tyrosine kinase similar to S. pombe WEE1 inhibitor of mitosis through phosphorylation of cdc2DDB0232433 CDS822502 1059 - 0.351275
DDB_G0291844 DDB_G0291844 DDB0232433 CDS838751 1998 - 0.20971
DDB_G0291852 DDB_G0291852 DDB0232433 CDS775774 1071 - 0.259571
DDB_G0291854 DDB_G0291854 DDB0232433 CDS787015 2022 - 0.300692
DDB_G0291860 DDB_G0291860 has a short region of similarity with CARD3 (caspase recruitment domain family member 3)DDB0232433 CDS846677 2394 - 0.24269
DDB_G0291872 DDB_G0291872 DDB0232433 CDS855161 2688 + 0.273438
DDB_G0291874 DDB_G0291874 DDB0232433 CDS858095 336 - 0.235119
DDB_G0291878_RTE DDB_G0291878 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS861379 2322 + 0.353144
DDB_G0291880_RTE DDB_G0291880 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS874531 684 + 0.337719
DDB_G0291882_RTE DDB_G0291882 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS875439 684 + 0.337719
DDB_G0291884_RTE DDB_G0291884 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS878204 3180 + 0.350629
DDB_G0291886_ps DDB_G0291886 similar to DDB0232433 CDS881755 2151 + 0.248257
DDB_G0291888 DDB_G0291888 DDB0232433 CDS886219 1416 + 0.214689
DDB_G0291892 DDB_G0291892 DDB0232433 CDS899533 861 + 0.227642
DDB_G0291896 DDB_G0291896 weakly similar to mammalian NASP (Nuclear Autoantigenic Sperm Protein) a histone chaperone required for DNA replication normal cell cycle progression and cell proliferationbrbr bCommunity annotation:b DDB G0291896 is similar (first blast hit both ways) to the N1N2 protein of Xenopus in humans known as NASP (nuclear autoantigenic sperm protein) a histone chaperone found in all dividing cells and implicated in chromatin assembly (see Wang et al NAR 36 5763-5772 (2008). NASP is required for cell cycle progression and is upregulated in a variety of cancers (see Alekseev et al Reproductive Biology and Endocrinology 7 45 2009).br DDB_G0291896 is overexpressed threefold (p2e-72) in a Dicty strain in which the retinoblastoma-like protein rblA has been disrupted. Most genes with functions in cell cycle progression are overexpressed in this strain and most overexpressed genes have identifiable cell cycle functions (Doquang et al. in preparation) these include other genes involved in chromatin asDDB0232433 CDS904350 1503 + 0.314039
DDB_G0291898 DDB_G0291898 DDB0232433 CDS909614 165 + 0.345455
DDB_G0291900 DDB_G0291900 DDB0232433 CDS911015 780 + 0.264103
DDB_G0291902 DDB_G0291902 DDB0232433 CDS911883 1011 - 0.229476
DDB_G0291904 DDB_G0291904 DDB0232433 CDS915091 1791 + 0.244556
DDB_G0291906 DDB_G0291906 DDB0232433 CDS917876 3711 + 0.261385
DDB_G0291908 DDB_G0291908 DDB0232433 CDS921791 1020 - 0.204902
DDB_G0291912 DDB_G0291912 DDB0232433 CDS931229 1251 - 0.282174
DDB_G0291914 DDB_G0291914 DDB0232433 CDS933442 351 - 0.230769
DDB_G0291918 DDB_G0291918 putative protein serinethreonine kinase CAMK group kinase domain is similar to those of mammalian death-associated protein kinases (DAPK)DDB0232433 CDS943654 2010 + 0.287065
DDB_G0291920 DDB_G0291920 DDB0232433 CDS946580 1380 + 0.136232
DDB_G0291924 DDB_G0291924 DDB0232433 CDS952138 939 + 0.15442
DDB_G0291926 DDB_G0291926 weakly similar ro S. cerevisiae Arc1 a protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases delivering tRNA to them stimulating catalysis and ensuring their localization to the cytoplasmDDB0232433 CDS959253 1092 - 0.282967
DDB_G0291930_ps DDB_G0291930 putative pseudogene similar to a family of Dictyostelium genes including DDB0232433 CDS906094 2850 - 0.155789
DDB_G0291934 DDB_G0291934 DDB0232433 CDS937759 2727 - 0.164283
DDB_G0291936 DDB_G0291936 DDB0232433 CDS962283 810 + 0.197531
DDB_G0291938 DDB_G0291938 DDB0232433 CDS964334 1158 + 0.221071
DDB_G0291940_RTE DDB_G0291940 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS872034 2310 + 0.352381
DDB_G0291942 DDB_G0291942 DDB0232433 CDS898616 477 + 0.274633
DDB_G0291946 DDB_G0291946 DDB0232433 CDS934204 1722 - 0.233449
DDB_G0291948 DDB_G0291948 belongs to the UPF0539 family similar to human C7orf59DDB0232433 CDS936889 264 - 0.268939
DDB_G0291952 DDB_G0291952 DDB0232433 CDS841885 480 + 0.310417
DDB_G0291954_RTE DDB_G0291954 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS860099 756 + 0.420635
DDB_G0291956_RTE DDB_G0291956 partial ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS864825 237 + 0.337553
DDB_G0291958_RTE DDB_G0291958 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS866031 3828 + 0.309039
DDB_G0291960_RTE DDB_G0291960 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS870523 720 + 0.398611
DDB_G0291962_RTE DDB_G0291962 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS876601 1080 + 0.412963
DDB_G0291964_RTE DDB_G0291964 partial ORF1 and ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS893019 4221 - 0.309879
DDB_G0291966 DDB_G0291966 DDB0232433 CDS948054 939 - 0.345048
DDB_G0291968 DDB_G0291968 DDB0232433 CDS966638 1950 + 0.168205
DDB_G0291984 DDB_G0291984 DDB0232433 CDS1206606 3669 + 0.334696
DDB_G0291992 DDB_G0291992 no known homologs REMI mutant forms aberrant fruiting bodies (see DDB0232433 CDS1056383 900 - 0.244444
DDB_G0292000 DDB_G0292000 DDB0232433 CDS992955 1779 - 0.232153
DDB_G0292006 DDB_G0292006 DDB0232433 CDS1004992 966 + 0.247412
DDB_G0292008 DDB_G0292008 DDB0232433 CDS1010717 2406 + 0.201579
DDB_G0292010 DDB_G0292010 DDB0232433 CDS1014321 2334 + 0.288346
DDB_G0292012 DDB_G0292012 belongs to the GNAT family conserved in fungiDDB0232433 CDS1016886 1158 + 0.239206
DDB_G0292016 DDB_G0292016 DDB0232433 CDS1027245 2757 + 0.305767
DDB_G0292018_ps DDB_G0292018 putative pseudogene similar to DDB0232433 CDS1030321 135 + 0.251852
DDB_G0292020 DDB_G0292020 DDB0232433 CDS1032623 2541 - 0.258166
DDB_G0292024 DDB_G0292024 dual specificity phosphatases remove phosphate groups from tyrosine and serinethreonine residues DDB0232433 CDS1039810 501 + 0.339321
DDB_G0292028 DDB_G0292028 DDB0232433 CDS1046109 2799 + 0.310468
DDB_G0292030 DDB_G0292030 DDB0232433 CDS1049058 1038 - 0.226397
DDB_G0292032 DDB_G0292032 DDB0232433 CDS1051056 4944 + 0.218649
DDB_G0292038 DDB_G0292038 conserved in bacteria predicted to have a structural domain found in several acyl-CoA acyltransferase enzymes contains a predicted peroxisomal targeting signalDDB0232433 CDS1062124 813 + 0.250923
DDB_G0292042 DDB_G0292042 DDB0232433 CDS1066047 2346 - 0.322677
DDB_G0292044 DDB_G0292044 DDB0232433 CDS1069821 1617 + 0.246753
DDB_G0292046 DDB_G0292046 DDB0232433 CDS1071921 9723 + 0.246735
DDB_G0292048 DDB_G0292048 DDB0232433 CDS1082258 774 + 0.237726
DDB_G0292054 DDB_G0292054 DDB0232433 CDS1101689 1212 + 0.331683
DDB_G0292056 DDB_G0292056 DDB0232433 CDS1115547 5472 + 0.272844
DDB_G0292058 DDB_G0292058 contains a weak tweety (tty) domain which is of unknown functionDDB0232433 CDS1121898 1662 - 0.316486
DDB_G0292060_RTE DDB_G0292060 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1125152 849 + 0.365135
DDB_G0292062_RTE DDB_G0292062 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1126179 1362 + 0.339941
DDB_G0292070 DDB_G0292070 DDB0232433 CDS1148827 2484 - 0.296699
DDB_G0292076 DDB_G0292076 DDB0232433 CDS1156278 984 + 0.284553
DDB_G0292078 DDB_G0292078 DDB0232433 CDS1157682 168 - 0.261905
DDB_G0292080 DDB_G0292080 DDB0232433 CDS1159633 972 + 0.359053
DDB_G0292084_ps DDB_G0292084 putative pseudogene similar to D. discoideum gene DDB0232433 CDS1161454 501 - 0.411178
DDB_G0292086_ps DDB_G0292086 putative pseudogene similar to D. discoideum gene DDB0232433 CDS1166334 351 + 0.310541
DDB_G0292088 DDB_G0292088 DDB0232433 CDS1166986 336 - 0.327381
DDB_G0292090_ps DDB_G0292090 putative pseudogene fragment similar to a family of D. discoideum genes including DDB0232433 CDS1167971 507 - 0.422091
DDB_G0292092 DDB_G0292092 DDB0232433 CDS1169702 369 + 0.311653
DDB_G0292094 DDB_G0292094 DDB0232433 CDS1170735 1038 - 0.300578
DDB_G0292096 DDB_G0292096 contains a cytidine and deoxycytidylate deaminase zinc-binding region contains a carbohydrate-binding domain contains a predicted signal peptideDDB0232433 CDS1176701 966 - 0.421325
DDB_G0292098 DDB_G0292098 DDB0232433 CDS1180007 3129 + 0.259508
DDB_G0292106 DDB_G0292106 DDB0232433 CDS1191356 903 + 0.293466
DDB_G0292108 DDB_G0292108 DDB0232433 CDS1192584 2490 - 0.278715
DDB_G0292110 DDB_G0292110 member of the patatin family of glycoproteins which are storage proteins but also possess lipase activityDDB0232433 CDS1201167 1053 + 0.253561
DDB_G0292114 DDB_G0292114 DDB0232433 CDS1217707 627 - 0.236045
DDB_G0292116 DDB_G0292116 belongs to the short-chain dehydrogenasesreductases family similar to human HSDL2 (Hydroxysteroid dehydrogenase-like protein 2)DDB0232433 CDS1219275 849 - 0.328622
DDB_G0292124 DDB_G0292124 DDB0232433 CDS1228678 3513 - 0.24936
DDB_G0292128 DDB_G0292128 DDB0232433 CDS1233335 5919 - 0.281298
DDB_G0292132 DDB_G0292132 members of the multi antimicrobial extrusion (MATE) family function as drugsodium antiporters and are found in bacteria archaea and eukaryotes these proteins are predicted to have 12 alpha-helical transmembrane regionsDDB0232433 CDS1244360 2007 - 0.269058
DDB_G0292138 DDB_G0292138 DDB0232433 CDS1250981 552 + 0.309783
DDB_G0292140 DDB_G0292140 DDB0232433 CDS1256247 1566 - 0.295658
DDB_G0292144 DDB_G0292144 DDB0232433 CDS1267882 1059 - 0.234183
DDB_G0292146 DDB_G0292146 DDB0232433 CDS1271733 1137 + 0.208443
DDB_G0292148 DDB_G0292148 DDB0232433 CDS1273206 1569 - 0.262588
DDB_G0292154 DDB_G0292154 DDB0232433 CDS1006156 4152 - 0.221821
DDB_G0292158 DDB_G0292158 DDB0232433 CDS1139831 717 + 0.241283
DDB_G0292160 DDB_G0292160 DDB0232433 CDS1263546 525 + 0.306667
DDB_G0292162 DDB_G0292162 DDB0232433 CDS1269573 1251 - 0.211831
DDB_G0292166 DDB_G0292166 DDB0232433 CDS968881 3309 + 0.187972
DDB_G0292170 DDB_G0292170 DDB0232433 CDS1113786 696 + 0.195402
DDB_G0292172_RTE DDB_G0292172 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS1128211 1065 - 0.292019
DDB_G0292174_RTE DDB_G0292174 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS1130560 1335 + 0.307116
DDB_G0292178_ps DDB_G0292178 putative pseudogene similar to D. discoideum gene DDB0232433 CDS1163265 432 - 0.31713
DDB_G0292186 DDB_G0292186 DDB0232433 CDS1196812 3402 + 0.255144
DDB_G0292188 DDB_G0292188 conserved hypothetical Dictyostelium protein contains a weak von Willebrand factor type A domainDDB0232433 CDS1253197 4386 - 0.331509
DDB_G0292190 DDB_G0292190 DDB0232433 CDS1259597 2835 - 0.257143
DDB_G0292192 DDB_G0292192 DDB0232433 CDS1275799 1689 - 0.253996
DDB_G0292194 DDB_G0292194 DDB0232433 CDS1279409 1680 + 0.250595
DDB_G0292196 DDB_G0292196 DDB0232433 CDS1282462 1959 - 0.235835
DDB_G0292198_RTE DDB_G0292198 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1298736 565 - 0.318584
DDB_G0292202 DDB_G0292202 DDB0232433 CDS1065129 777 + 0.253539
DDB_G0292208 DDB_G0292208 DDB0232433 CDS1336984 327 - 0.33945
DDB_G0292210 DDB_G0292210 DDB0232433 CDS1335430 564 - 0.235816
DDB_G0292214 DDB_G0292214 DDB0232433 CDS1330581 2280 - 0.291667
DDB_G0292226 DDB_G0292226 DDB0232433 CDS1323250 1092 + 0.244505
DDB_G0292228 DDB_G0292228 DDB0232433 CDS1321609 120 - 0.233333
DDB_G0292230 DDB_G0292230 DDB0232433 CDS1311188 9000 + 0.296667
DDB_G0292232 DDB_G0292232 DDB0232433 CDS1340609 210 - 0.285714
DDB_G0292234 DDB_G0292234 DDB0232433 CDS1341999 5478 - 0.301387
DDB_G0292236 DDB_G0292236 conserved hypothetical protein contains a putative signal peptideDDB0232433 CDS1348680 1002 + 0.241517
DDB_G0292240 DDB_G0292240 DDB0232433 CDS1358978 1140 + 0.317544
DDB_G0292246 DDB_G0292246 DDB0232433 CDS1370987 891 + 0.274972
DDB_G0292248 DDB_G0292248 DDB0232433 CDS1372308 945 - 0.284656
DDB_G0292252 DDB_G0292252 DDB0232433 CDS1302637 3771 - 0.222222
DDB_G0292254 DDB_G0292254 DDB0232433 CDS1308810 447 - 0.239374
DDB_G0292256 DDB_G0292256 DDB0232433 CDS1339608 219 + 0.360731
DDB_G0292258 DDB_G0292258 DDB0232433 CDS1307362 741 + 0.236167
DDB_G0292260_RTE DDB_G0292260 partial ORF1 and ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS1373916 3793 + 0.321645
DDB_G0292272_TE DDB_G0292272 putative DNA transposon Tdd-4 refer to U57081 for full-length consensus elementDDB0232433 CDS1379067 2148 - 0.304935
DDB_G0292274_ps DDB_G0292274 DDB0232433 CDS1381886 1044 + 0.228927
DDB_G0292280_ps DDB_G0292280 putative pseudogene similar to a protein family including DDB0232433 CDS1383635 771 + 0.263294
DDB_G0292282 DDB_G0292282 DDB0232433 CDS1385822 1779 + 0.226532
DDB_G0292284 DDB_G0292284 DDB0232433 CDS1387934 1557 + 0.226076
DDB_G0292286 DDB_G0292286 DDB0232433 CDS1390052 3726 + 0.27241
DDB_G0292288 DDB_G0292288 DDB0232433 CDS1393939 1008 - 0.318452
DDB_G0292290 DDB_G0292290 DDB0232433 CDS1396696 2310 + 0.237662
DDB_G0292292 DDB_G0292292 DDB0232433 CDS1399162 1989 - 0.23278
DDB_G0292298 DDB_G0292298 DDB0232433 CDS1424473 501 - 0.307385
DDB_G0292302 DDB_G0292302 DDB0232433 CDS1428528 2319 - 0.330746
DDB_G0292312 DDB_G0292312 DDB0232433 CDS1454104 1593 - 0.287508
DDB_G0292320 DDB_G0292320 DDB0232433 CDS1479615 786 + 0.270992
DDB_G0292322 DDB_G0292322 DDB0232433 CDS1481023 873 - 0.250859
DDB_G0292330 DDB_G0292330 DDB0232433 CDS1495780 543 + 0.224678
DDB_G0292332 DDB_G0292332 DDB0232433 CDS1500852 561 + 0.210339
DDB_G0292334 DDB_G0292334 DDB0232433 CDS1502579 2331 - 0.277134
DDB_G0292336 DDB_G0292336 DDB0232433 CDS1512244 1236 - 0.223301
DDB_G0292338_RTE DDB_G0292338 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1524225 3096 - 0.348514
DDB_G0292340 DDB_G0292340 member of the patatin family of glycoproteins which are storage proteins but also possess lipase activityDDB0232433 CDS1444957 5022 - 0.202708
DDB_G0292342 DDB_G0292342 DDB0232433 CDS1441126 1017 + 0.212389
DDB_G0292350 DDB_G0292350 DDB0232433 CDS1496951 3675 + 0.270204
DDB_G0292352_TE DDB_G0292352 putative DNA transposon Tdd-4 refer to U57081 for full-length consensus elementDDB0232433 CDS1508214 1770 - 0.314689
DDB_G0292354 DDB_G0292354 putative protein serinethreonine kinase TTBK family similar to casein kinase similar to mammalian tau-tubulin kinase (TTBK) which phosphorylates the microtubule-associated protein tau implicated in Alzheimer's diseaseDDB0232433 CDS1420214 1488 + 0.30578
DDB_G0292360 DDB_G0292360 DDB0232433 CDS1482971 192 + 0.28125
DDB_G0292362 DDB_G0292362 putative ortholog of mammalian thimet oligopeptidase THOP1 involved in cytoplasmic peptide degradation including neuropeptides and S. cerevisiae PRD1 involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteinsDDB0232433 CDS1486590 2022 + 0.32542
DDB_G0292364_TE DDB_G0292364 putative DNA transposon Tdd-4 fragment refer to U57081 for full-length consensus elementDDB0232433 CDS1506515 942 - 0.235669
DDB_G0292366 DDB_G0292366 DDB0232433 CDS1514365 906 - 0.339956
DDB_G0292368 DDB_G0292368 DDB0232433 CDS1516008 714 + 0.312325
DDB_G0292370_RTE DDB_G0292370 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS1516913 531 - 0.306968
DDB_G0292372_RTE DDB_G0292372 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1518919 2856 - 0.34979
DDB_G0292374_RTE DDB_G0292374 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1522623 1086 - 0.413444
DDB_G0292376_RTE DDB_G0292376 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1527937 1080 - 0.414815
DDB_G0292394 DDB_G0292394 DDB0232433 CDS1536171 3378 - 0.214032
DDB_G0292396 DDB_G0292396 DDB0232433 CDS1540535 3366 + 0.258467
DDB_G0292408 DDB_G0292408 DDB0232433 CDS1560005 642 + 0.221184
DDB_G0292410 DDB_G0292410 similar to H. sapiens zinc finger CCCH-type containing 15 and M. musculus immediate early response erythropoietin 4DDB0232433 CDS1561008 1122 - 0.336898
DDB_G0292412 DDB_G0292412 similar to S. cerevisiae and S. pombe TRK1 and TRK2 potassium transporters contains 9 predicted transmembrane domainsDDB0232433 CDS1563103 1947 - 0.260401
DDB_G0292414 DDB_G0292414 DDB0232433 CDS1566054 2439 - 0.222222
DDB_G0292416 DDB_G0292416 DDB0232433 CDS1569201 2793 - 0.257787
DDB_G0292422 DDB_G0292422 contains two RNA recognition motifs (RRMs) which are putative RNA binding domainsDDB0232433 CDS1580488 2064 - 0.265988
DDB_G0292424 DDB_G0292424 DDB0232433 CDS1593747 1017 + 0.285152
DDB_G0292428 DDB_G0292428 DDB0232433 CDS1601647 1203 - 0.240233
DDB_G0292430 DDB_G0292430 DDB0232433 CDS1609068 1323 - 0.249433
DDB_G0292432 DDB_G0292432 DDB0232433 CDS1610862 1815 - 0.293113
DDB_G0292434 DDB_G0292434 DDB0232433 CDS1618538 771 + 0.311284
DDB_G0292438 DDB_G0292438 DDB0232433 CDS1631231 816 + 0.230392
DDB_G0292440 DDB_G0292440 DDB0232433 CDS1632296 1068 - 0.282772
DDB_G0292442 DDB_G0292442 phosphorylates NAD to NADPDDB0232433 CDS1638801 2574 - 0.266123
DDB_G0292444 DDB_G0292444 DDB0232433 CDS1653442 1302 - 0.208141
DDB_G0292446 DDB_G0292446 DDB0232433 CDS1655640 3909 + 0.294705
DDB_G0292448 DDB_G0292448 DDB0232433 CDS1659633 1044 - 0.234674
DDB_G0292450 DDB_G0292450 DDB0232433 CDS1660973 1719 + 0.201862
DDB_G0292452_RTE DDB_G0292452 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE5-B refer to GenBank AF298209 for consensus full-length elementDDB0232433 CDS1664228 2160 + 0.371759
DDB_G0292454 DDB_G0292454 DDB0232433 CDS1666854 1032 + 0.246124
DDB_G0292458 DDB_G0292458 DDB0232433 CDS1671355 1767 + 0.273345
DDB_G0292462 DDB_G0292462 DDB0232433 CDS1678244 972 + 0.322016
DDB_G0292464 DDB_G0292464 homolog of human DGCR14 believed to play a role in velocardiofacialDiGeorge syndrome (VCFSDGS)DDB0232433 CDS1679719 1584 + 0.277778
DDB_G0292468 DDB_G0292468 DDB0232433 CDS1683880 2076 + 0.27553
DDB_G0292472 DDB_G0292472 DDB0232433 CDS1689735 1653 + 0.238355
DDB_G0292474 DDB_G0292474 DDB0232433 CDS1692117 930 - 0.247312
DDB_G0292476 DDB_G0292476 similar to human PRSS16 (thymus-specific serine protease) contains a putative signal peptideDDB0232433 CDS1697908 1458 + 0.266804
DDB_G0292478 DDB_G0292478 DDB0232433 CDS1704175 3804 + 0.298896
DDB_G0292480 DDB_G0292480 DDB0232433 CDS1708601 2154 + 0.303621
DDB_G0292482 DDB_G0292482 DDB0232433 CDS1711273 552 + 0.246377
DDB_G0292484 DDB_G0292484 DDB0232433 CDS1712190 1335 + 0.225468
DDB_G0292492 DDB_G0292492 DDB0232433 CDS1734904 678 + 0.193215
DDB_G0292494 DDB_G0292494 similar to human TTC39A and TTC39B matches PFAM outer membrane protein IML2 mitochondrialtetratricopeptide repeat protein 39DDB0232433 CDS1739944 2388 - 0.220268
DDB_G0292498 DDB_G0292498 DDB0232433 CDS1745775 153 - 0.326797
DDB_G0292500 DDB_G0292500 DDB0232433 CDS1746019 741 - 0.186235
DDB_G0292502 DDB_G0292502 DDB0232433 CDS1747364 558 + 0.236559
DDB_G0292506 DDB_G0292506 DDB0232433 CDS1755318 1935 - 0.327132
DDB_G0292516_RTE DDB_G0292516 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS1532417 1335 + 0.307865
DDB_G0292518 DDB_G0292518 DDB0232433 CDS1553006 261 + 0.348659
DDB_G0292520 DDB_G0292520 DDB0232433 CDS1591188 747 + 0.322624
DDB_G0292524 DDB_G0292524 dymeclin ortholog involoved in Dyggve-Melchior-Clausen syndromeDDB0232433 CDS1597521 2796 - 0.24535
DDB_G0292526 DDB_G0292526 DDB0232433 CDS1607713 177 - 0.214689
DDB_G0292528 DDB_G0292528 DDB0232433 CDS1616689 897 - 0.331104
DDB_G0292530 DDB_G0292530 DDB0232433 CDS1625548 2967 + 0.276373
DDB_G0292532_ps DDB_G0292532 DDB0232433 CDS1629116 1386 - 0.26912
DDB_G0292534 DDB_G0292534 DDB0232433 CDS1633774 180 + 0.316667
DDB_G0292536_ps DDB_G0292536 putative pseudogene carbohydratepurine kinase domain-containing protein similar to DDB0232433 CDS1634108 201 - 0.268657
DDB_G0292540_RTE DDB_G0292540 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS1700323 867 - 0.311419
DDB_G0292542 DDB_G0292542 DDB0232433 CDS1702357 318 - 0.31761
DDB_G0292546 DDB_G0292546 DDB0232433 CDS1752243 741 - 0.210526
DDB_G0292548_RTE DDB_G0292548 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1759374 684 - 0.333333
DDB_G0292550 DDB_G0292550 DDB0232433 CDS1642791 4194 - 0.223891
DDB_G0292556 DDB_G0292556 DDB0232433 CDS1877443 4584 + 0.220986
DDB_G0292568 DDB_G0292568 DDB0232433 CDS1778529 1044 - 0.29023
DDB_G0292570 DDB_G0292570 DDB0232433 CDS1784981 522 - 0.254789
DDB_G0292572_ps DDB_G0292572 putative pseudogene fragment similar to D. discoideum gene DDB0232433 CDS1789760 309 + 0.242718
DDB_G0292574 DDB_G0292574 DDB0232433 CDS1791327 870 + 0.270115
DDB_G0292576_ps DDB_G0292576 putative pseudogene fragment very similar to DDB0232433 CDS1792509 1263 - 0.223278
DDB_G0292578 DDB_G0292578 DDB0232433 CDS1796405 3402 - 0.237507
DDB_G0292580_ps DDB_G0292580 putative pseudogene similar to D. discoideum gene DDB0232433 CDS1800000 609 - 0.205255
DDB_G0292582_ps DDB_G0292582 putative pseudogene similar to DDB0232433 CDS1801613 333 - 0.228228
DDB_G0292586 DDB_G0292586 DDB0232433 CDS1803595 1368 + 0.29386
DDB_G0292590 DDB_G0292590 DDB0232433 CDS1817104 2292 - 0.202007
DDB_G0292598 DDB_G0292598 weakly similar to hssA2C7E family protein has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS1825370 204 + 0.29902
DDB_G0292602 DDB_G0292602 DDB0232433 CDS1827272 879 - 0.31058
DDB_G0292610 DDB_G0292610 DDB0232433 CDS1838484 768 - 0.356771
DDB_G0292612 DDB_G0292612 DDB0232433 CDS1840465 1503 + 0.132402
DDB_G0292614 DDB_G0292614 DDB0232433 CDS1842218 282 - 0.251773
DDB_G0292616 DDB_G0292616 DDB0232433 CDS1845104 2310 + 0.224675
DDB_G0292624 DDB_G0292624 protein serinethreonine kinase CAMK group CAMK1 family similar to the Dictyostelium myosin light chain kinase (mlkA) and mammalian CAM kinasesDDB0232433 CDS1864394 942 + 0.298301
DDB_G0292626 DDB_G0292626 belongs to the RAS-like GTPase superfamily similar to bacterial GTP-binding protein YchF similar to D. purpureum proteinDDB0232433 CDS1866598 1230 + 0.293496
DDB_G0292628 DDB_G0292628 DDB0232433 CDS1868427 540 + 0.194444
DDB_G0292630 DDB_G0292630 DDB0232433 CDS1870947 642 + 0.285047
DDB_G0292634 DDB_G0292634 DDB0232433 CDS1874997 495 + 0.230303
DDB_G0292636 DDB_G0292636 DDB0232433 CDS1875598 483 - 0.281574
DDB_G0292638 DDB_G0292638 DDB0232433 CDS1888191 999 - 0.293293
DDB_G0292640 DDB_G0292640 DDB0232433 CDS1889950 1107 + 0.231256
DDB_G0292642 DDB_G0292642 DDB0232433 CDS1892855 2712 - 0.297935
DDB_G0292644 DDB_G0292644 DDB0232433 CDS1897455 792 + 0.291667
DDB_G0292646 DDB_G0292646 DDB0232433 CDS1898644 879 - 0.195677
DDB_G0292648 DDB_G0292648 has similarity to the mammalian coiled-coil domain-containing protein 12 (CCDC12) the cwf18 family is involved in mRNA splicing which has been isolated as a subcomplex of the splicosome in Schizosaccharomyces pombeDDB0232433 CDS1901580 978 + 0.202454
DDB_G0292650 DDB_G0292650 DDB0232433 CDS1902913 774 + 0.267442
DDB_G0292652 DDB_G0292652 DDB0232433 CDS1905792 612 + 0.243464
DDB_G0292656 DDB_G0292656 DDB0232433 CDS1913079 2379 - 0.211433
DDB_G0292658 DDB_G0292658 DDB0232433 CDS1915721 1035 - 0.226087
DDB_G0292660 DDB_G0292660 DDB0232433 CDS1917310 450 - 0.248889
DDB_G0292662 DDB_G0292662 DDB0232433 CDS1918021 1152 + 0.246528
DDB_G0292664 DDB_G0292664 DDB0232433 CDS1919877 531 + 0.354049
DDB_G0292666 DDB_G0292666 DDB0232433 CDS1920980 1563 - 0.264875
DDB_G0292668 DDB_G0292668 DDB0232433 CDS1923247 3288 + 0.218066
DDB_G0292672_ps DDB_G0292672 putative pseudogene fragment similar to the neighboring gene DDB0232433 CDS1927372 756 - 0.190476
DDB_G0292674 DDB_G0292674 DDB0232433 CDS1929551 3237 - 0.216559
DDB_G0292680 DDB_G0292680 DDB0232433 CDS1939703 1920 + 0.301562
DDB_G0292682 DDB_G0292682 DDB0232433 CDS1942435 3882 + 0.279495
DDB_G0292684 DDB_G0292684 DDB0232433 CDS1946830 672 - 0.160714
DDB_G0292692 DDB_G0292692 DDB0232433 CDS1955631 882 + 0.246032
DDB_G0292694 DDB_G0292694 DDB0232433 CDS1956745 2355 - 0.227176
DDB_G0292698 DDB_G0292698 DDB0232433 CDS1997307 921 - 0.365907
DDB_G0292700 DDB_G0292700 DDB0232433 CDS1999329 894 - 0.241611
DDB_G0292704 DDB_G0292704 DDB0232433 CDS1843458 321 - 0.286604
DDB_G0292710 DDB_G0292710 contains one PPIase cyclophilin-type domain and one RRM (RNA recognition motif) domain homolog of human PPIL4 and S. pombe cyp6 PPIase is an enzyme that accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptidesDDB0232433 CDS1995447 1470 - 0.278912
DDB_G0292712_RTE DDB_G0292712 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS1777391 275 + 0.323636
DDB_G0292714 DDB_G0292714 DDB0232433 CDS1780390 4446 + 0.234818
DDB_G0292718_ps DDB_G0292718 putative pseudogene fragment similar to DDB0232433 CDS1794964 234 - 0.269231
DDB_G0292720_ps DDB_G0292720 putative pseudogene fragment similar to DDB0232433 CDS1795540 294 + 0.309524
DDB_G0292722 DDB_G0292722 DDB0232433 CDS1834902 1026 - 0.246589
DDB_G0292726_RTE DDB_G0292726 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS1910704 1335 - 0.307865
DDB_G0292728 DDB_G0292728 DDB0232433 CDS2001708 464 + 0.258621
DDB_G0292734 DDB_G0292734 putative eukaryotic translation initiation factor 2 alpha (eIF2alpha) kinase putative protein serinethreonine kinase related to the GCN2 (general control non-derepressible) family of protein kinases that phosphorylate the alpha subunit of eIF2DDB0232433 CDS2002272 888 + 0.324324
DDB_G0292738 DDB_G0292738 DDB0232433 CDS2081220 900 + 0.277778
DDB_G0292740 DDB_G0292740 related to H. sapiens BCSC-1 (LOH11CR2A) a possible tumor suppressor geneDDB0232433 CDS2078010 2733 + 0.279546
DDB_G0292742 DDB_G0292742 contains a dilute domain found at the carboxyl terminus of non-muscle myosin VDDB0232433 CDS2074742 2640 + 0.267803
DDB_G0292746 DDB_G0292746 member of the patatin family of glycoproteins which are storage proteins but also possess lipase activity also contains a PH domain involved in intracellular signalingDDB0232433 CDS2069434 2898 + 0.327467
DDB_G0292748 DDB_G0292748 DDB0232433 CDS2066863 1068 - 0.309925
DDB_G0292750 DDB_G0292750 DDB0232433 CDS2064418 2055 + 0.254988
DDB_G0292752 DDB_G0292752 DDB0232433 CDS2063367 465 + 0.329032
DDB_G0292754 DDB_G0292754 DDB0232433 CDS2058466 294 + 0.380952
DDB_G0292756 DDB_G0292756 DDB0232433 CDS2057283 516 + 0.257752
DDB_G0292764 DDB_G0292764 DDB0232433 CDS2050588 408 - 0.306373
DDB_G0292766 DDB_G0292766 DDB0232433 CDS2041426 861 - 0.221835
DDB_G0292774 DDB_G0292774 DDB0232433 CDS2013605 1098 + 0.270492
DDB_G0292776 DDB_G0292776 DDB0232433 CDS2016449 627 + 0.255183
DDB_G0292780 DDB_G0292780 DDB0232433 CDS2019712 1416 - 0.293785
DDB_G0292796_RTE DDB_G0292796 ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2083172 3144 - 0.33874
DDB_G0292798_RTE DDB_G0292798 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2086606 1032 - 0.323643
DDB_G0292802 DDB_G0292802 DDB0232433 CDS2089930 3645 - 0.19369
DDB_G0292818 DDB_G0292818 DDB0232433 CDS2182883 633 + 0.240126
DDB_G0292822 DDB_G0292822 DDB0232433 CDS2100987 1800 + 0.3
DDB_G0292824 DDB_G0292824 DDB0232433 CDS2103859 1794 + 0.299889
DDB_G0292826 DDB_G0292826 DDB0232433 CDS2106426 1785 + 0.29916
DDB_G0292828 DDB_G0292828 DDB0232433 CDS2109065 1872 + 0.269231
DDB_G0292832 DDB_G0292832 DDB0232433 CDS2127296 798 - 0.285714
DDB_G0292834 DDB_G0292834 DDB0232433 CDS2130562 1710 - 0.29883
DDB_G0292836 DDB_G0292836 similar to minor histocompatibility antigen H13 belongs to the peptidase A22B familyDDB0232433 CDS2133981 1065 - 0.276995
DDB_G0292842_ps DDB_G0292842 putative pseudogene very similar to DDB0232433 CDS2138630 438 - 0.33105
DDB_G0292844 DDB_G0292844 DDB0232433 CDS2139605 639 - 0.312989
DDB_G0292846 DDB_G0292846 DDB0232433 CDS2145680 1107 + 0.290876
DDB_G0292848 DDB_G0292848 DDB0232433 CDS2146988 2919 - 0.310038
DDB_G0292852 DDB_G0292852 ortholog of human LACE1 an AFG1-like ATPase and similar to yeast AFG1 family of proteins contains a P-loop motif and are predicted to be ATPasesDDB0232433 CDS2099022 1584 + 0.279672
DDB_G0292854 DDB_G0292854 DDB0232433 CDS2154718 2121 - 0.27157
DDB_G0292856 DDB_G0292856 DDB0232433 CDS2162983 2796 + 0.202074
DDB_G0292858 DDB_G0292858 member of the patatin family of glycoproteins which are storage proteins but also possess lipase activity also contains 10 predicted transmembrane domainsDDB0232433 CDS2166120 3570 - 0.291036
DDB_G0292860 DDB_G0292860 DDB0232433 CDS2170773 1173 - 0.306905
DDB_G0292866 DDB_G0292866 DDB0232433 CDS2176999 2601 - 0.247597
DDB_G0292874 DDB_G0292874 DDB0232433 CDS2190855 678 - 0.241888
DDB_G0292876 DDB_G0292876 DDB0232433 CDS2191825 1821 + 0.278418
DDB_G0292880 DDB_G0292880 dual specificity phosphatases remove phosphate groups from tyrosine and serinethreonine residues DDB0232433 CDS2200299 1833 + 0.286961
DDB_G0292882 DDB_G0292882 DDB0232433 CDS2208837 1020 - 0.32549
DDB_G0292884 DDB_G0292884 DDB0232433 CDS2211021 2628 + 0.325723
DDB_G0292886 DDB_G0292886 DDB0232433 CDS2214235 1485 + 0.249158
DDB_G0292888 DDB_G0292888 DDB0232433 CDS2216174 657 + 0.258752
DDB_G0292890 DDB_G0292890 DDB0232433 CDS2218813 366 + 0.229508
DDB_G0292892 DDB_G0292892 DDB0232433 CDS2219566 327 + 0.302752
DDB_G0292894 DDB_G0292894 deaminates L-ornithine to L-proline this family also contains mu-crystallin the major component of the eye lens in several Australian marsupialsDDB0232433 CDS2220707 1107 - 0.296296
DDB_G0292900 DDB_G0292900 DDB0232433 CDS2233950 1497 + 0.273881
DDB_G0292902 DDB_G0292902 the SWIM domain is found in variety of prokaryotic and eukaryotic proteins it is predicted to have DNA-binding and protein-protein interaction functions in different contextsDDB0232433 CDS2238007 1857 - 0.234249
DDB_G0292906 DDB_G0292906 DDB0232433 CDS2252539 372 - 0.290323
DDB_G0292914 DDB_G0292914 DDB0232433 CDS2269065 723 + 0.262794
DDB_G0292916 DDB_G0292916 DDB0232433 CDS2269986 327 - 0.217125
DDB_G0292918 DDB_G0292918 catalyzes the hydrolysis of the terminal 12-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man9(GlcNAc)2 some members of this family are responsible for protein N-linked glycosylation while other participate in the degradation of misfolded glycoproteins in the endoplasmic reticulumDDB0232433 CDS2271200 1728 - 0.333333
DDB_G0292920 DDB_G0292920 tensin family protein (related to the tumor suppressor PTEN) contains a a lipid phosphatase domain and a C2-like domainDDB0232433 CDS2274050 1362 - 0.259912
DDB_G0292922 DDB_G0292922 DDB0232433 CDS2276495 447 + 0.232662
DDB_G0292928 DDB_G0292928 DDB0232433 CDS2282811 483 - 0.233954
DDB_G0292930 DDB_G0292930 DDB0232433 CDS2283488 2304 + 0.258681
DDB_G0292932 DDB_G0292932 DDB0232433 CDS2286339 2307 - 0.192458
DDB_G0292934 DDB_G0292934 DDB0232433 CDS2295609 2343 - 0.198037
DDB_G0292936 DDB_G0292936 DDB0232433 CDS2298560 2460 - 0.199593
DDB_G0292938_RTE DDB_G0292938 DDB0232433 CDS2258753 324 + 0.327161
DDB_G0292940 DDB_G0292940 DDB0232433 CDS2158048 219 - 0.232877
DDB_G0292946 DDB_G0292946 similar to D. purpureum protein contains a putative signal sequence and one central transmembrane domainDDB0232433 CDS2228053 1254 + 0.254386
DDB_G0292950 DDB_G0292950 DDB0232433 CDS2289490 2325 - 0.205591
DDB_G0292952 DDB_G0292952 DDB0232433 CDS2292229 2727 - 0.19802
DDB_G0292954_TE DDB_G0292954 putative DNA transposon Tdd-4 refer to U57081 for full-length consensus elementDDB0232433 CDS2301581 714 + 0.323529
DDB_G0292960 DDB_G0292960 DDB0232433 CDS2129207 1173 + 0.225916
DDB_G0292962 DDB_G0292962 DDB0232433 CDS2140644 642 - 0.309969
DDB_G0292964 DDB_G0292964 DDB0232433 CDS2142125 1101 - 0.273388
DDB_G0292966 DDB_G0292966 DDB0232433 CDS2143669 810 - 0.341975
DDB_G0292968 DDB_G0292968 similar to beta-1-31-4-endoglucanase expressed in pstAO cells and in upper cup during culminationDDB0232433 CDS2151110 2268 - 0.315256
DDB_G0292970 DDB_G0292970 DDB0232433 CDS2176472 210 - 0.3
DDB_G0292972 DDB_G0292972 similar to hypothetical bacterial protein contains a weak SIR2 domainDDB0232433 CDS2196528 3504 + 0.321347
DDB_G0292976 DDB_G0292976 similar to D. purpureum protein contains seven predicted transmembrane domainsDDB0232433 CDS2224445 1644 + 0.212287
DDB_G0292978 DDB_G0292978 DDB0232433 CDS2236386 1326 + 0.282805
DDB_G0292988 DDB_G0292988 DDB0232433 CDS2312391 5034 - 0.319031
DDB_G0292990 DDB_G0292990 DDB0232433 CDS2303391 2040 - 0.194608
DDB_G0293014 DDB_G0293014 similar to human PRSS16 (thymus-specific serine protease) contains a putative signal peptideDDB0232433 CDS2331143 1461 + 0.321013
DDB_G0293016 DDB_G0293016 DDB0232433 CDS2333163 270 + 0.233333
DDB_G0293020 DDB_G0293020 DDB0232433 CDS2337693 963 + 0.261682
DDB_G0293022_ps DDB_G0293022 putative pseudogene small fragment similar to D. discoideum gene DDB0232433 CDS2342209 150 - 0.326667
DDB_G0293026 DDB_G0293026 highly similar to DDB0232433 CDS2343104 498 - 0.289157
DDB_G0293028 DDB_G0293028 DDB0232433 CDS2344265 513 + 0.378168
DDB_G0293032 DDB_G0293032 DDB0232433 CDS2351624 4698 - 0.270115
DDB_G0293034 DDB_G0293034 DDB0232433 CDS2371825 942 - 0.33121
DDB_G0293038 DDB_G0293038 DDB0232433 CDS2375925 372 + 0.362903
DDB_G0293040 DDB_G0293040 DDB0232433 CDS2376674 2187 + 0.221765
DDB_G0293042 DDB_G0293042 DDB0232433 CDS2379108 1251 - 0.28697
DDB_G0293044 DDB_G0293044 DDB0232433 CDS2381806 2151 - 0.273826
DDB_G0293046 DDB_G0293046 DDB0232433 CDS2389862 513 - 0.269006
DDB_G0293048 DDB_G0293048 DDB0232433 CDS2398022 291 - 0.298969
DDB_G0293050 DDB_G0293050 DDB0232433 CDS2399122 873 - 0.272623
DDB_G0293054 DDB_G0293054 DDB0232433 CDS2404735 1392 + 0.217672
DDB_G0293056 DDB_G0293056 DDB0232433 CDS2406225 2109 - 0.209578
DDB_G0293058 DDB_G0293058 DDB0232433 CDS2409869 3030 + 0.176898
DDB_G0293060 DDB_G0293060 DDB0232433 CDS2413794 1158 + 0.330743
DDB_G0293062 DDB_G0293062 conserved in plants and bacteria predicted to have a structural domain found in several acyl-CoA acyltransferase enzymesDDB0232433 CDS2415200 246 + 0.313008
DDB_G0293064 DDB_G0293064 DDB0232433 CDS2418202 1722 - 0.334495
DDB_G0293066 DDB_G0293066 conserved in Dictyostelium contains one putative transmembrane domainDDB0232433 CDS2420535 2868 - 0.279637
DDB_G0293068 DDB_G0293068 DDB0232433 CDS2425522 858 + 0.276224
DDB_G0293070 DDB_G0293070 putative ortholog of H. sapiens TEP1 a component of the telomerase ribonucleoprotein complex involved in replication of chromosome terminiDDB0232433 CDS2426564 7293 - 0.319896
DDB_G0293072 DDB_G0293072 DDB0232433 CDS2434758 1701 - 0.258083
DDB_G0293074 DDB_G0293074 belongs to the amino acidauxin permease family similar to human SLC36A4 disruption reduces extracellular GABA levelsDDB0232433 CDS2437739 1368 - 0.313596
DDB_G0293078 DDB_G0293078 DDB0232433 CDS2446845 825 - 0.26303
DDB_G0293082 DDB_G0293082 DDB0232433 CDS2450060 1092 - 0.282051
DDB_G0293090 DDB_G0293090 DDB0232433 CDS2463701 6024 + 0.336155
DDB_G0293098 DDB_G0293098 DDB0232433 CDS2491651 1050 + 0.194286
DDB_G0293100 DDB_G0293100 DDB0232433 CDS2506785 615 - 0.279675
DDB_G0293102 DDB_G0293102 DDB0232433 CDS2508062 1260 - 0.22619
DDB_G0293106 DDB_G0293106 DDB0232433 CDS2517023 2454 - 0.236756
DDB_G0293108 DDB_G0293108 DDB0232433 CDS2520283 1434 - 0.279637
DDB_G0293112 DDB_G0293112 DDB0232433 CDS2526722 195 + 0.323077
DDB_G0293114 DDB_G0293114 DDB0232433 CDS2527421 1230 - 0.296748
DDB_G0293116 DDB_G0293116 DDB0232433 CDS2529994 456 + 0.333333
DDB_G0293118 DDB_G0293118 DDB0232433 CDS2535539 1539 + 0.306043
DDB_G0293120 DDB_G0293120 chromatin remodeling complex subunit R (CHR) protein SWI2SNF2 homologDDB0232433 CDS2546935 6618 - 0.294349
DDB_G0293122 DDB_G0293122 similar to human GSTT2 (glutathione S-transferase theta-2) glutathione transferases participate in the detoxification of reactive electrophilic compounds by catalysing their conjugation to glutathioneDDB0232433 CDS2554630 660 - 0.237879
DDB_G0293126 DDB_G0293126 DDB0232433 CDS2565278 660 - 0.277273
DDB_G0293128 DDB_G0293128 DDB0232433 CDS2567187 6678 + 0.28227
DDB_G0293132 DDB_G0293132 DDB0232433 CDS2577800 2301 + 0.269013
DDB_G0293134 DDB_G0293134 DDB0232433 CDS2580338 1245 - 0.194378
DDB_G0293138 DDB_G0293138 bCommunity annotation:b DDB_G0293138 is related (first blast hit both ways) to a gene which is called src1 in budding yeast. DDB_G0293138 is threefold upregulated in vegetative cells of a Dicty strain in which the retinoblastoma-like gene rblA has been disrubpted. Many genes with roles in cell cycle progression are upregulated in this strain. The gene also shows the developmental trajectory typical of cell cycle genes (see DictyExpress) in both Dd and Dp. The Dp promoter contains an element recognized by smyd3 a chromatin modifier which is rblA-repressed in Dicty and implicated as an oncogene in vertebrates. The Dp element (TTTCCCTCC) is close to conserved in Dd (TTTCCCTCT). All of these suggest that DDB_G0293138 is a cell cycle gene in amebae. In both Dp and Dd there is also expression in late development which is rblA-independent in Dd suggesting a possible cell-cycle independent role during terminal differentiation.Harry MacWilliams March 2010br DDB0232433 CDS2586745 2829 + 0.278897
DDB_G0293140_RTE DDB_G0293140 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS2365100 1497 + 0.352705
DDB_G0293142_RTE DDB_G0293142 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2479985 1335 + 0.307116
DDB_G0293144_RTE DDB_G0293144 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2482983 1335 + 0.307865
DDB_G0293150 DDB_G0293150 DDB0232433 CDS2585552 201 + 0.243781
DDB_G0293152_RTE DDB_G0293152 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS2591529 3127 - 0.301567
DDB_G0293154 DDB_G0293154 this gene belongs to the trx family of genes and is located next to DDB0232433 CDS2334087 153 - 0.30719
DDB_G0293156_ps DDB_G0293156 putative pseudogene related to the TKL (tyrosine kinase-like) group of protein kinases contains a partial kinase domainDDB0232433 CDS2336989 324 + 0.327161
DDB_G0293158_RTE DDB_G0293158 ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2340052 558 - 0.34767
DDB_G0293160_RTE DDB_G0293160 DDB0232433 CDS2340864 789 + 0.377693
DDB_G0293162 DDB_G0293162 highly similar to DDB0232433 CDS2346747 498 - 0.291165
DDB_G0293164 DDB_G0293164 DDB0232433 CDS2357058 1167 + 0.261354
DDB_G0293166 DDB_G0293166 DDB0232433 CDS2359312 918 + 0.249455
DDB_G0293170 DDB_G0293170 DDB0232433 CDS2392178 3165 + 0.222749
DDB_G0293172_ps DDB_G0293172 putative pseudogene similar to DDB0232433 CDS2470132 1785 + 0.239776
DDB_G0293174 DDB_G0293174 DDB0232433 CDS2473465 3810 + 0.246194
DDB_G0293176 DDB_G0293176 DDB0232433 CDS2485971 5169 + 0.285935
DDB_G0293178 DDB_G0293178 DDB0232433 CDS2497885 1020 - 0.177451
DDB_G0293184 DDB_G0293184 kinase domain similar to S. pombe cdc7 cell division control protein 7 which plays a role in cytokinesis contains RhoGAP domain found in the Rho family of small G proteins unlikely to function as a kinase as it does not contain a catalytic aspartateDDB0232433 CDS2540484 3561 + 0.281382
DDB_G0293186 DDB_G0293186 DDB0232433 CDS2544546 1266 - 0.314376
DDB_G0293188 DDB_G0293188 DDB0232433 CDS2553978 345 - 0.226087
DDB_G0293190 DDB_G0293190 DDB0232433 CDS2583503 1002 - 0.277445
DDB_G0293200_ps DDB_G0293200 putative pseudogene similar to D. discoideum genes DDB0232433 CDS2729012 1152 + 0.259549
DDB_G0293202 DDB_G0293202 has similarity to mammalian TNF receptor-associated factors 5 and 6 (TRAF5 TRAF6)DDB0232433 CDS2718912 1314 - 0.313546
DDB_G0293204 DDB_G0293204 one of three paralogs in Dictyostelium (other genes: DDB0232433 CDS2716007 2745 - 0.28816
DDB_G0293206 DDB_G0293206 DDB0232433 CDS2715182 549 - 0.202186
DDB_G0293208 DDB_G0293208 similar to DDB0232433 CDS2710326 468 - 0.247863
DDB_G0293212 DDB_G0293212 DDB0232433 CDS2696303 2541 + 0.275482
DDB_G0293216 DDB_G0293216 DDB0232433 CDS2689035 3537 - 0.240317
DDB_G0293222 DDB_G0293222 DDB0232433 CDS2682288 918 - 0.242919
DDB_G0293234 DDB_G0293234 ortholog of the conserved non-catalytic N-acetyltransferase that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein that contains a Met-Glu Met-Asp Met-Asn or Met-Met N-terminus ortholog of S. cerevisiae MDM20 the N-terminal acetyltransferase B (NatB) complex subunitDDB0232433 CDS2661843 2814 - 0.27221
DDB_G0293236 DDB_G0293236 DDB0232433 CDS2653194 1320 + 0.265909
DDB_G0293240 DDB_G0293240 DDB0232433 CDS2643748 1617 + 0.22449
DDB_G0293242 DDB_G0293242 DDB0232433 CDS2642031 1446 + 0.309129
DDB_G0293244 DDB_G0293244 DDB0232433 CDS2638704 1941 + 0.297269
DDB_G0293250 DDB_G0293250 contains 4 predicted transmembrane domains similar to D. purpureum geneDDB0232433 CDS2630267 429 - 0.286713
DDB_G0293252 DDB_G0293252 contains 2 RRM1 domains a SWAPSurp domain and a C-terminal ENTHVHS domain putative RNA splicing factor similar to D. purpureum geneDDB0232433 CDS2627689 2010 + 0.332836
DDB_G0293256 DDB_G0293256 DDB0232433 CDS2616152 207 - 0.173913
DDB_G0293258 DDB_G0293258 similar to myotubularin a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (35)-bi-phosphateDDB0232433 CDS2612161 3579 + 0.230791
DDB_G0293260 DDB_G0293260 DDB0232433 CDS2610415 498 - 0.184739
DDB_G0293262 DDB_G0293262 contains a predicted signal peptide similar to DDB0232433 CDS2609479 450 - 0.286667
DDB_G0293268 DDB_G0293268 DDB0232433 CDS2601693 210 + 0.314286
DDB_G0293270_RTE DDB_G0293270 partial ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS2595773 1209 - 0.336642
DDB_G0293272_RTE DDB_G0293272 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2726875 1335 - 0.305618
DDB_G0293274 DDB_G0293274 contains 2 FNIP domains contains 1 B-box zinc finger domainDDB0232433 CDS2721106 1623 - 0.28589
DDB_G0293276 DDB_G0293276 member of the AGC kinase group similar to kinase domains of AktPKB and MAST (microtubule-associated serinethreonine kinase) family membersDDB0232433 CDS2701490 1551 - 0.246937
DDB_G0293278 DDB_G0293278 DDB0232433 CDS2700382 156 - 0.198718
DDB_G0293280_RTE DDB_G0293280 part of ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE5-C refer to GenBank AF298210 (DDB_G0293280) for a partially assembled consensus elementDDB0232433 CDS2730183 686 + 0.370262
DDB_G0293282_ps DDB_G0293282 putative pseudogene similar to Dictyostelium genes DDB0232433 CDS2723111 2118 - 0.260623
DDB_G0293284 DDB_G0293284 DDB0232433 CDS2698963 912 - 0.240132
DDB_G0293290 DDB_G0293290 DDB0232433 CDS2658870 2364 - 0.232657
DDB_G0293292 DDB_G0293292 putative protein serinethreonine kinase N-terminal kinase domain similar to vertebrate Nek kinases which are involved in regulation of mitosis C-terminal kinase domain weakly similar to ULK (Unc-51-like kinase)DDB0232433 CDS2647324 4116 + 0.234208
DDB_G0293294 DDB_G0293294 DDB0232433 CDS2636918 1506 + 0.2417
DDB_G0293296 DDB_G0293296 DDB0232433 CDS2634996 1413 + 0.206653
DDB_G0293300 DDB_G0293300 DDB0232433 CDS2733345 3654 + 0.281883
DDB_G0293302 DDB_G0293302 DDB0232433 CDS2737579 1959 + 0.18632
DDB_G0293304 DDB_G0293304 DDB0232433 CDS2739726 786 - 0.21374
DDB_G0293308 DDB_G0293308 DDB0232433 CDS2743223 3438 + 0.287086
DDB_G0293310 DDB_G0293310 DDB0232433 CDS2747762 180 - 0.266667
DDB_G0293312 DDB_G0293312 DDB0232433 CDS2748675 231 + 0.272727
DDB_G0293314 DDB_G0293314 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2749397 288 - 0.378472
DDB_G0293316 DDB_G0293316 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2750083 252 + 0.321429
DDB_G0293318 DDB_G0293318 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2750911 243 - 0.366255
DDB_G0293320 DDB_G0293320 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2751543 246 + 0.304878
DDB_G0293322 DDB_G0293322 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2752374 273 - 0.377289
DDB_G0293324 DDB_G0293324 DDB0232433 CDS2755452 210 - 0.319048
DDB_G0293326 DDB_G0293326 DDB0232433 CDS2756536 276 - 0.387681
DDB_G0293328 DDB_G0293328 DDB0232433 CDS2760211 396 + 0.39899
DDB_G0293330 DDB_G0293330 DDB0232433 CDS2764080 402 - 0.253731
DDB_G0293332 DDB_G0293332 DDB0232433 CDS2765016 699 + 0.194564
DDB_G0293334 DDB_G0293334 DDB0232433 CDS2765769 1533 - 0.210046
DDB_G0293336 DDB_G0293336 weakly similar to hssA2C7E family proteins has a similar gene structure with a N terminal 13 nt exon DDB0232433 CDS2753047 252 + 0.313492
DDB_G0293342_RTE DDB_G0293342 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS2768512 684 - 0.342105
DDB_G0293344_RTE DDB_G0293344 Part of ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE5-C refer to GenBank AF298210 for partially assembled consensus elementDDB0232433 CDS2772108 420 + 0.366667
DDB_G0293346 DDB_G0293346 DDB0232433 CDS2774066 3084 + 0.260052
DDB_G0293348_RTE DDB_G0293348 DDB0232433 CDS2777877 669 + 0.28849
DDB_G0293350_RTE DDB_G0293350 DDB0232433 CDS2778739 3444 + 0.334204
DDB_G0293352_ps DDB_G0293352 putative pseudogene fragment similar to a family of D. discoideum genes including DDB0232433 CDS2782815 408 + 0.335784
DDB_G0293354 DDB_G0293354 catalyzes the reaction (3S)-3-hydroxyacyl-CoA trans-2(or 3)-enoyl-CoA Hsub2subODDB0232433 CDS2784930 894 - 0.32774
DDB_G0293356 DDB_G0293356 highly similar to other short proteins expressed in the prestalk region expressed in pstO cellsDDB0232433 CDS2786412 258 - 0.383721
DDB_G0293362 DDB_G0293362 DDB0232433 CDS2790501 267 + 0.430712
DDB_G0293366 DDB_G0293366 DDB0232433 CDS2795992 531 + 0.382298
DDB_G0293370 DDB_G0293370 DDB0232433 CDS2797816 318 + 0.289308
DDB_G0293378 DDB_G0293378 DDB0232433 CDS2818966 1650 + 0.287273
DDB_G0293380 DDB_G0293380 bCommunity annotation:b DDB G0293380 contains a conserved domain which is best matched by COG0116 N6 adenine-specific DNA methylase (E-value 5e-14). The similarity to PRK11783 rRNA methyltransferase is lower (9e-11). The blast matches list both putative RNA methylases and putative N6 adenine-specific DNA methylases. Thus although it does not now appear to be possible to assign DDB_G0293380 conclusively to either category the case for a DNA methylase currently looks a bit stronger.br DDB_G0293380 is overexpressed fivefold (p0.008) in a Dicty strain in which the retinoblastoma-like gene rblA has been disrupted. Most genes with functions necessary for cell cycle progression are overexpressed in this strain and most of the overexpressed genes have identifiable cell cycle functions. A tempting interpretation is that the product of DDB_G0293380 is involved in a DNA methylation pathway which is coupled with DNA replication. Harry MacWilliams December 2009br DDB0232433 CDS2824551 1686 + 0.242586
DDB_G0293382 DDB_G0293382 identical to DDB0232433 CDS2791219 477 + 0.417191
DDB_G0293384 DDB_G0293384 DDB0232433 CDS2826651 930 + 0.17957
DDB_G0293386 DDB_G0293386 DDB0232433 CDS2792033 2073 - 0.232996
DDB_G0293388 DDB_G0293388 putative ATP-dependent metalloprotease FtsH similar to S. cerevisiae YME1 that plays a role in mitochondrial protein metabolismDDB0232433 CDS2798298 2304 - 0.327691
DDB_G0293390 DDB_G0293390 DDB0232433 CDS2828734 1392 + 0.155891
DDB_G0293392 DDB_G0293392 conserved protein mammalian orthologs are predicted Zn-dependent hydrolases of the beta-lactamase foldDDB0232433 CDS2830538 1110 + 0.282883
DDB_G0293400_RTE DDB_G0293400 ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS2839313 561 - 0.344029
DDB_G0293402 DDB_G0293402 DDB0232433 CDS2841033 1032 - 0.205426
DDB_G0293404 DDB_G0293404 poorly characterized but highly conserved protein may function as a tRNA m5C methyltransferase chaperoneDDB0232433 CDS2846362 456 - 0.265351
DDB_G0293406 DDB_G0293406 DDB0232433 CDS2852833 3429 - 0.230679
DDB_G0293410 DDB_G0293410 identical to DDB0232433 CDS2842898 477 - 0.417191
DDB_G0293412 DDB_G0293412 DDB0232433 CDS2844115 2010 + 0.30199
DDB_G0293414 DDB_G0293414 DDB0232433 CDS2847823 4851 + 0.288394
DDB_G0293418 DDB_G0293418 DDB0232433 CDS2859059 195 + 0.328205
DDB_G0293420 DDB_G0293420 DDB0232433 CDS2859525 1341 + 0.211037
DDB_G0293422 DDB_G0293422 DDB0232433 CDS2865868 210 - 0.266667
DDB_G0293424 DDB_G0293424 DDB0232433 CDS2868585 267 + 0.337079
DDB_G0293426 DDB_G0293426 DDB0232433 CDS2868959 1482 - 0.306343
DDB_G0293428 DDB_G0293428 DDB0232433 CDS2864640 825 - 0.288485
DDB_G0293430 DDB_G0293430 DDB0232433 CDS2872733 159 + 0.283019
DDB_G0293432_TE DDB_G0293432 DDB0232433 CDS2873447 429 - 0.307692
DDB_G0293440 DDB_G0293440 DDB0232433 CDS2897244 1152 - 0.250868
DDB_G0293442 DDB_G0293442 DDB0232433 CDS2899455 1164 - 0.317869
DDB_G0293444 DDB_G0293444 DDB0232433 CDS2901323 1368 - 0.296784
DDB_G0293446_ps DDB_G0293446 putative pseudogene similar to a family of D. discoideum genes including DDB0232433 CDS2886461 4002 + 0.247626
DDB_G0293448 DDB_G0293448 DDB0232433 CDS2875111 1431 - 0.245982
DDB_G0293452_TE DDB_G0293452 DDB0232433 CDS2904523 231 - 0.277056
DDB_G0293454 DDB_G0293454 DDB0232433 CDS2905541 510 - 0.24902
DDB_G0293456 DDB_G0293456 DDB0232433 CDS2907748 441 + 0.258503
DDB_G0293460 DDB_G0293460 DDB0232433 CDS2919081 1275 + 0.287843
DDB_G0293464 DDB_G0293464 DDB0232433 CDS2906126 1332 - 0.283784
DDB_G0293474 DDB_G0293474 DDB0232433 CDS2927015 717 + 0.217573
DDB_G0293478 DDB_G0293478 weakly similar to cudA contains the motifs believed to be required for DNA binding: LSS and RCVSK (RVVSK in CudA)DDB0232433 CDS2942975 1524 - 0.256562
DDB_G0293480 DDB_G0293480 DDB0232433 CDS2945490 264 + 0.299242
DDB_G0293482_RTE DDB_G0293482 DDB0232433 CDS2933475 1188 - 0.311448
DDB_G0293486_RTE DDB_G0293486 DDB0232433 CDS2934812 876 - 0.300228
DDB_G0293488 DDB_G0293488 DDB0232433 CDS2946961 729 + 0.326475
DDB_G0293490_RTE DDB_G0293490 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS2948897 1775 + 0.347606
DDB_G0293492 DDB_G0293492 glycoside hydrolase family 25 (GH25) comprises enzymes with lysozyme (EC:3.2.1.17) activity contains a putative N-terminal signal peptideDDB0232433 CDS2951996 642 + 0.356698
DDB_G0293494 DDB_G0293494 DDB0232433 CDS2959996 786 - 0.183206
DDB_G0293498 DDB_G0293498 contains a UBX domain found in ubiquitin-regulatory proteinsDDB0232433 CDS2964407 1248 + 0.33734
DDB_G0293500 DDB_G0293500 DDB0232433 CDS2965853 1173 - 0.225064
DDB_G0293504 DDB_G0293504 belongs to the nucleotidyltransferase superfamily contains one poly A polymerase head domainDDB0232433 CDS2968920 1677 - 0.285033
DDB_G0293506_ps DDB_G0293506 putative pseudogene small fragment similar to D. discoideum gene DDB0232433 CDS2971375 345 - 0.255072
DDB_G0293508 DDB_G0293508 DDB0232433 CDS2972530 3108 + 0.287323
DDB_G0293512 DDB_G0293512 DDB0232433 CDS2978200 1527 - 0.301899
DDB_G0293514 DDB_G0293514 DDB0232433 CDS2984590 492 + 0.292683
DDB_G0293516_RTE DDB_G0293516 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS2985588 549 + 0.35337
DDB_G0293518_ps DDB_G0293518 putative pseudogene similar to a D. discoideum gene family including DDB0232433 CDS2980192 282 + 0.336879
DDB_G0293534 DDB_G0293534 DDB0232433 CDS3002117 3000 + 0.242333
DDB_G0293542 DDB_G0293542 DDB0232433 CDS2989503 921 - 0.283388
DDB_G0293548 DDB_G0293548 DDB0232433 CDS3018651 1998 - 0.23974
DDB_G0293550 DDB_G0293550 DDB0232433 CDS3022571 3657 + 0.184851
DDB_G0293552 DDB_G0293552 DDB0232433 CDS3026375 2034 - 0.326942
DDB_G0293562 DDB_G0293562 DDB0232433 CDS3048907 1584 + 0.289141
DDB_G0293566 DDB_G0293566 glycoside hydrolase family 25 (GH25) comprises enzymes with lysozyme (EC:3.2.1.17) activity contains a putative N-terminal signal peptideDDB0232433 CDS3051866 651 + 0.3149
DDB_G0293570 DDB_G0293570 contains a RUN domain which is predicted to play a role in Ras-like GTPase signaling pathwaysDDB0232433 CDS3056692 4062 + 0.239783
DDB_G0293572 DDB_G0293572 DDB0232433 CDS3061098 390 - 0.207692
DDB_G0293574 DDB_G0293574 DDB0232433 CDS3063340 210 + 0.2
DDB_G0293578 DDB_G0293578 DDB0232433 CDS3070057 1986 - 0.288016
DDB_G0293580 DDB_G0293580 catalyzes the reaction Hsub2subO dCTP NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232433 CDS3073231 525 - 0.289524
DDB_G0293582 DDB_G0293582 DDB0232433 CDS3074914 744 + 0.264785
DDB_G0293586 DDB_G0293586 contains one LisH domain contains 3 predicted coiled-coil domainsDDB0232433 CDS3081583 6045 - 0.305045
DDB_G0293590 DDB_G0293590 DDB0232433 CDS3095576 4521 - 0.297722
DDB_G0293592 DDB_G0293592 DDB0232433 CDS3100713 483 + 0.277433
DDB_G0293594 DDB_G0293594 DDB0232433 CDS3101875 492 + 0.264228
DDB_G0293596 DDB_G0293596 DDB0232433 CDS3106575 2379 + 0.338377
DDB_G0293598 DDB_G0293598 DDB0232433 CDS3109284 2007 - 0.209766
DDB_G0293600_ps DDB_G0293600 putative pseudogene fragment similar to the neighboring genes DDB0232433 CDS3111920 1092 - 0.250916
DDB_G0293604 DDB_G0293604 DDB0232433 CDS3126896 897 - 0.248606
DDB_G0293606 DDB_G0293606 DDB0232433 CDS3128846 1056 - 0.300189
DDB_G0293610 DDB_G0293610 conserved protein in ciliates and plants contains 9 predicted transmembrane domains including one signal peptide there is an almost identical D. discoideum protein DDB0232433 CDS3135284 1524 + 0.343832
DDB_G0293612 DDB_G0293612 DDB0232433 CDS3141895 2775 + 0.184144
DDB_G0293614 DDB_G0293614 ortholog of S. cerevisiae DIS3 and H. sapiens KIAA1008 component of the nucleolar exosome involved in RNA processingDDB0232433 CDS3144728 3021 - 0.300232
DDB_G0293616 DDB_G0293616 DDB0232433 CDS3148125 222 - 0.198198
DDB_G0293620 DDB_G0293620 DDB0232433 CDS3157149 1728 - 0.234375
DDB_G0293622 DDB_G0293622 DDB0232433 CDS3159608 2976 + 0.290995
DDB_G0293624 DDB_G0293624 DDB0232433 CDS3162861 372 + 0.193548
DDB_G0293626 DDB_G0293626 DDB0232433 CDS3164445 1830 + 0.271038
DDB_G0293628 DDB_G0293628 DDB0232433 CDS3167249 4926 + 0.252944
DDB_G0293630_RTE DDB_G0293630 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE5-B refer to GenBank AF298209 for consensus full-length elementDDB0232433 CDS3176971 3435 - 0.346725
DDB_G0293632_RTE DDB_G0293632 ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE5-B refer to GenBank GenBank AF298209 for consensus full-length elementDDB0232433 CDS3180508 1365 - 0.311355
DDB_G0293636 DDB_G0293636 similar to the conserved survival of motor neuron-related splicing factor 30 (SMNDC1 SPF30) the tudor domain is found in many proteins that colocalize with ribonucleoprotein or single-strand DNA-associated complexesDDB0232433 CDS3190337 975 - 0.251282
DDB_G0293638 DDB_G0293638 DDB0232433 CDS3191821 861 - 0.28223
DDB_G0293640 DDB_G0293640 DDB0232433 CDS3195274 447 + 0.331096
DDB_G0293644 DDB_G0293644 DDB0232433 CDS3198630 1374 + 0.279476
DDB_G0293648 DDB_G0293648 DDB0232433 CDS3208622 252 + 0.329365
DDB_G0293652 DDB_G0293652 DDB0232433 CDS3211810 1968 - 0.186484
DDB_G0293658 DDB_G0293658 DDB0232433 CDS3221806 1245 - 0.258635
DDB_G0293660 DDB_G0293660 DDB0232433 CDS3223447 198 - 0.181818
DDB_G0293662 DDB_G0293662 DDB0232433 CDS3224777 1992 + 0.240462
DDB_G0293664 DDB_G0293664 DDB0232433 CDS3227956 4284 + 0.247666
DDB_G0293666 DDB_G0293666 similar to terpene cyclases (C1) of the class 1 family of isoprenoid biosynthesis enzymes which are found in bacteria fungi and plantsDDB0232433 CDS3235366 939 - 0.251331
DDB_G0293668 DDB_G0293668 DDB0232433 CDS3238981 909 + 0.20242
DDB_G0293670 DDB_G0293670 DDB0232433 CDS3241196 792 + 0.224747
DDB_G0293672 DDB_G0293672 DDB0232433 CDS3242621 285 + 0.249123
DDB_G0293674 DDB_G0293674 DDB0232433 CDS3243242 1893 + 0.310618
DDB_G0293676 DDB_G0293676 DDB0232433 CDS3246015 267 + 0.400749
DDB_G0293678 DDB_G0293678 DDB0232433 CDS3246808 1710 + 0.293567
DDB_G0293680 DDB_G0293680 DDB0232433 CDS3248934 336 - 0.267857
DDB_G0293682 DDB_G0293682 DDB0232433 CDS3251577 1578 + 0.222433
DDB_G0293684_RTE DDB_G0293684 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3066410 1335 - 0.306367
DDB_G0293688 DDB_G0293688 DDB0232433 CDS3133176 162 + 0.203704
DDB_G0293690_RTE DDB_G0293690 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3138091 1335 + 0.307116
DDB_G0293692_RTE DDB_G0293692 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3009712 1335 + 0.307116
DDB_G0293694 DDB_G0293694 DDB0232433 CDS2998070 543 + 0.294659
DDB_G0293696 DDB_G0293696 small Dictyostelium protein family absent from other organisms very similar to neighboring gene DDB0232433 CDS3006120 240 + 0.341667
DDB_G0293698 DDB_G0293698 small Dictyostelium protein family absent from other organisms very similar to neighboring gene DDB0232433 CDS3007121 240 + 0.3375
DDB_G0293704 DDB_G0293704 DDB0232433 CDS3034210 708 - 0.223164
DDB_G0293708 DDB_G0293708 DDB0232433 CDS3054649 333 + 0.318318
DDB_G0293712 DDB_G0293712 DDB0232433 CDS3080260 564 + 0.281915
DDB_G0293714 DDB_G0293714 DDB0232433 CDS3102749 504 + 0.281746
DDB_G0293716_ps DDB_G0293716 putative pseudogene similar to D. discoideum gene DDB0232433 CDS3103876 651 + 0.262673
DDB_G0293718 DDB_G0293718 DDB0232433 CDS3104858 483 + 0.318841
DDB_G0293720 DDB_G0293720 DDB0232433 CDS3113521 4311 - 0.24913
DDB_G0293722 DDB_G0293722 DDB0232433 CDS3118866 4311 - 0.257017
DDB_G0293724 DDB_G0293724 DDB0232433 CDS3124039 2088 - 0.312739
DDB_G0293726_RTE DDB_G0293726 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3139824 201 + 0.263682
DDB_G0293728 DDB_G0293728 DDB0232433 CDS3153008 375 + 0.296
DDB_G0293730 DDB_G0293730 the TIM betaalpha-barrel domain is found in phospholipase C (PLC) like phosphodiesterasesDDB0232433 CDS3154705 2205 + 0.278912
DDB_G0293732_RTE DDB_G0293732 ORF2 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3173111 477 - 0.30608
DDB_G0293734_RTE DDB_G0293734 partial ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS3182350 984 + 0.332317
DDB_G0293736_RTE DDB_G0293736 partial ORF2 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS3185294 1854 + 0.298813
DDB_G0293744 DDB_G0293744 DDB0232433 CDS3261758 2538 + 0.179275
DDB_G0293746 DDB_G0293746 low level of similarity to mammalian PLK (polo-like kinase) unlikely to function as a kinase as it does not contain a catalytic aspartateDDB0232433 CDS3265690 1188 + 0.223906
DDB_G0293748 DDB_G0293748 DDB0232433 CDS3267287 4056 + 0.235454
DDB_G0293754 DDB_G0293754 DDB0232433 CDS3282657 537 + 0.18622
DDB_G0293756 DDB_G0293756 DDB0232433 CDS3283369 3300 - 0.23
DDB_G0293760 DDB_G0293760 DDB0232433 CDS3291080 345 + 0.269565
DDB_G0293762 DDB_G0293762 highly similar to DDB0232433 CDS3293162 3414 + 0.269772
DDB_G0293764_RTE DDB_G0293764 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS3297716 1953 - 0.346646
DDB_G0293770 DDB_G0293770 DDB0232433 CDS3303029 6324 - 0.306293
DDB_G0293774 DDB_G0293774 DDB0232433 CDS3310894 1518 - 0.267457
DDB_G0293776 DDB_G0293776 DDB0232433 CDS3312862 234 + 0.264957
DDB_G0293778_ps DDB_G0293778 putative pseudogene similar to Dictyostelium genes DDB0232433 CDS3316597 423 + 0.243499
DDB_G0293782 DDB_G0293782 DDB0232433 CDS3259115 2292 + 0.172775
DDB_G0293786 DDB_G0293786 DDB0232433 CDS3287474 834 - 0.194245
DDB_G0293788 DDB_G0293788 DDB0232433 CDS3313981 384 - 0.325521
DDB_G0293790_ps DDB_G0293790 DDB0232433 CDS3314676 231 - 0.324675
DDB_G0293792 DDB_G0293792 DDB0232433 CDS3318747 1311 + 0.294432
DDB_G0293794 DDB_G0293794 DDB0232433 CDS3321471 1062 + 0.277778
DDB_G0293796 DDB_G0293796 DDB0232433 CDS3323921 144 + 0.291667
DDB_G0293798 DDB_G0293798 DDB0232433 CDS3324262 495 + 0.313131
DDB_G0293800 DDB_G0293800 atypical protein kinase GTE group contains ankyrin repeats a bromodomain and a BTPPOZ domainDDB0232433 CDS3334534 2421 + 0.297811
DDB_G0293802 DDB_G0293802 DDB0232433 CDS3338059 2151 - 0.30172
DDB_G0293804 DDB_G0293804 DDB0232433 CDS3341293 1341 - 0.255034
DDB_G0293806 DDB_G0293806 DDB0232433 CDS3343109 741 + 0.233468
DDB_G0293808 DDB_G0293808 DDB0232433 CDS3352978 273 - 0.340659
DDB_G0293810 DDB_G0293810 conserved hypothetical Dictyostelium protein contains no functional domainsDDB0232433 CDS3353625 156 + 0.237179
DDB_G0293812 DDB_G0293812 conserved in D. purpureum and P. pallidum contains 12 putative transmembrane domains C-terminal region similar to new-glue proteinDDB0232433 CDS3355348 2343 + 0.311993
DDB_G0293814 DDB_G0293814 DDB0232433 CDS3361018 846 - 0.199764
DDB_G0293816 DDB_G0293816 DDB0232433 CDS3362954 936 - 0.221154
DDB_G0293818_RTE DDB_G0293818 DDB0232433 CDS3326857 3318 + 0.331525
DDB_G0293820 DDB_G0293820 DDB0232433 CDS3332058 819 - 0.318681
DDB_G0293822 DDB_G0293822 DDB0232433 CDS3344068 1332 - 0.234234
DDB_G0293826 DDB_G0293826 DDB0232433 CDS3348949 3786 + 0.243529
DDB_G0293828 DDB_G0293828 DDB0232433 CDS3358255 2283 + 0.261936
DDB_G0293830 DDB_G0293830 DDB0232433 CDS3365828 1110 + 0.24955
DDB_G0293832 DDB_G0293832 DDB0232433 CDS3367295 1038 - 0.262042
DDB_G0293836 DDB_G0293836 no homologs in other organisms contains a predicted signal peptide and a possible C-terminal transmembrane domainDDB0232433 CDS3369650 1572 + 0.254453
DDB_G0293838 DDB_G0293838 has similarity to the mammalian adiponectin receptor protein 1 contains 6 predicted transmembrane domainsDDB0232433 CDS3371531 1119 + 0.206434
DDB_G0293842 DDB_G0293842 DDB0232433 CDS3375777 612 - 0.156863
DDB_G0293846 DDB_G0293846 DDB0232433 CDS3380322 3216 + 0.145522
DDB_G0293852_RTE DDB_G0293852 partial ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE3-B refer to GenBank AF134170 for full-length consensus elementDDB0232433 CDS3384170 222 - 0.351351
DDB_G0293854 DDB_G0293854 DDB0232433 CDS3388739 255 + 0.305882
DDB_G0293856 DDB_G0293856 DDB0232433 CDS3389682 1830 - 0.257377
DDB_G0293858 DDB_G0293858 DDB0232433 CDS3392240 2403 - 0.226384
DDB_G0293860 DDB_G0293860 DDB0232433 CDS3395178 813 + 0.195572
DDB_G0293862 DDB_G0293862 DDB0232433 CDS3396260 750 - 0.309333
DDB_G0293864 DDB_G0293864 DDB0232433 CDS3398572 1527 + 0.251473
DDB_G0293866 DDB_G0293866 bCommunity annotation:b DDB_G0293866 has both N and C-terminal domains similar to aprataxin and contains a poly-ADP ribose binding domain. Aprataxin is suspected to play a role in several different DNA repair pathways specifically by resolving abortive ligation intermediates [see Ahe et. al Nature 443 713-6 (2006) Rass et al. JBC 282 9469-9474 (2007).]br DDB_GO293866 is 5-fold overexpressed in a Dicty strain in which the retinoblastoma-like gene rblA has been disrupted (Doquang et al in preparation). Genes whose products are involved in replication-coupled DNA repair are generally overexpressed 3 to 6-fold in this strain while genes in replication-independent repair pathways are overexpressed by smaller factors if at all. In mammalian cells aprataxin interacts with XRCC1 and Ligase3 which are involved in (replication-independent) excision repair. The corresponding Dictyostelium genes are overexpressed less than twofold in the rblA-disruptant. Harry MacWilliams September 2009br DDB0232433 CDS3400165 1692 - 0.22695
DDB_G0293868 DDB_G0293868 DDB0232433 CDS3402442 1638 - 0.230159
DDB_G0293870 DDB_G0293870 DDB0232433 CDS3406393 186 + 0.258065
DDB_G0293878 DDB_G0293878 DDB0232433 CDS3413755 4326 + 0.258437
DDB_G0293880 DDB_G0293880 DDB0232433 CDS3418217 987 - 0.281662
DDB_G0293884 DDB_G0293884 DDB0232433 CDS3421920 1542 + 0.218547
DDB_G0293890 DDB_G0293890 DDB0232433 CDS3429586 222 + 0.387387
DDB_G0293892_RTE DDB_G0293892 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE5-A formerly known as DREDDB0232433 CDS3384527 675 + 0.333333
DDB_G0293894_RTE DDB_G0293894 ORF1 of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS3431147 441 + 0.408163
DDB_G0293906 DDB_G0293906 DDB0232433 CDS3432681 318 + 0.27673
DDB_G0293908_ps DDB_G0293908 putative pseudogene similar to DDB0232433 CDS3436293 900 - 0.195556
DDB_G0293910 DDB_G0293910 DDB0232433 CDS3449223 318 + 0.27673
DDB_G0293916 DDB_G0293916 DDB0232433 CDS3471747 3510 + 0.241311
DDB_G0293920 DDB_G0293920 DDB0232433 CDS3481501 2586 + 0.322892
DDB_G0293922 DDB_G0293922 DDB0232433 CDS3484508 1146 + 0.222513
DDB_G0293924 DDB_G0293924 DDB0232433 CDS3490466 2661 + 0.282601
DDB_G0293926 DDB_G0293926 DDB0232433 CDS3504658 1497 - 0.225785
DDB_G0293930 DDB_G0293930 similar to human ZDHHC16 (zinc finger DHHC domain-containing protein 16) contains 4 putative transmembrane domainsDDB0232433 CDS3510935 960 - 0.258333
DDB_G0293934 DDB_G0293934 DDB0232433 CDS3520311 5142 - 0.280436
DDB_G0293938 DDB_G0293938 DDB0232433 CDS3532350 1788 + 0.266779
DDB_G0293940 DDB_G0293940 DDB0232433 CDS3536699 1017 + 0.261554
DDB_G0293942 DDB_G0293942 DDB0232433 CDS3553305 4677 + 0.245884
DDB_G0293944 DDB_G0293944 DDB0232433 CDS3558157 390 - 0.197436
DDB_G0293946 DDB_G0293946 conserved protein similar to S. cerevisiae EMI5 a mitochondrial protein which is involved in meiotic-specific transcription and sporulationDDB0232433 CDS3558856 426 + 0.230047
DDB_G0293948 DDB_G0293948 DDB0232433 CDS3559692 2361 + 0.203727
DDB_G0293950 DDB_G0293950 DDB0232433 CDS3562548 972 + 0.26749
DDB_G0293954 DDB_G0293954 DDB0232433 CDS3570187 576 - 0.277778
DDB_G0293956 DDB_G0293956 DDB0232433 CDS3572844 354 - 0.30226
DDB_G0293958 DDB_G0293958 putative protein serinethreonine kinase similar to vertebrate Nek kinases which are involved in regulation of mitosisDDB0232433 CDS3460612 4779 + 0.208203
DDB_G0293964_RTE DDB_G0293964 ORF2 protein encoding endonuclease and reverse transcriptase of tRNA-specific non-long terminal repeat retrotransposon TRE3-A refer to GenBank AF134169 for full-length consensus elementDDB0232433 CDS3574884 3180 + 0.35
DDB_G0293970 DDB_G0293970 DDB0232433 CDS3434517 375 - 0.298667
DDB_G0293974 DDB_G0293974 DDB0232433 CDS3466413 1710 - 0.173099
DDB_G0293976 DDB_G0293976 DDB0232433 CDS3485736 1347 - 0.200445
DDB_G0293980 DDB_G0293980 DDB0232433 CDS3518793 993 + 0.277946
DDB_G0293982 DDB_G0293982 DDB0232433 CDS3537923 13014 - 0.256954
DDB_G0293988 DDB_G0293988 DDB0232433 CDS3583283 2928 - 0.244194
DDB_G0293990 DDB_G0293990 DDB0232433 CDS3578831 966 - 0.219462
DDB_G0293992 DDB_G0293992 contains one C2 domain which is is a Ca2-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane traffickingDDB0232433 CDS3588432 477 + 0.255765
DDB_G0293998 DDB_G0293998 DDB0232433 CDS3596687 459 + 0.300654
DDB_G0294002_RTE DDB_G0294002 ORF1 protein of tRNA-specific non-long terminal repeat retrotransposon TRE5-B refer to GenBank GenBank AF298209 for consensus full-length elementDDB0232433 CDS3600862 1365 - 0.311355
DDB_G0294004 DDB_G0294004 DDB0232433 CDS3589297 2220 - 0.185135
DDB_G0294006_ps DDB_G0294006 putative pseudogene small fragment similar to DDB0232433 CDS3593501 561 - 0.187166
DDB_G0294008_ps DDB_G0294008 putative pseudogene similar to Dictyostelium genes DDB0232433 CDS3598311 423 + 0.243499
DDB_G0294010_TE DDB_G0294010 ORF1 encoding a protein of unknown function of the putative DNA transposon DDT-A refer to AF298201 for full-length consensus elementDDB0232433 CDS3599142 1149 - 0.227154
DDB_G0294555 DDB_G0294555 DDB0232433 CDS100153 1659 + 0.246534
DDB_G0294573 DDB_G0294573 similar to DDB0232433 CDS3288367 360 - 0.261111
DDB_G0294625_ps DDB_G0294625 putative pseudogene conserved Dictyostelium protein familyDDB0232433 CDS1607077 243 - 0.308642
DDB_G0294627 DDB_G0294627 DDB0232433 CDS1606038 609 - 0.308703
DDB_G0294629 DDB_G0294629 DDB0232433 CDS1603469 1785 - 0.285154
DDB_G0295475 DDB_G0295475 DDB0232433 CDS418715 1710 - 0.283626
DDB_G0295483 DDB_G0295483 similar to H. sapiens C13orf18 RUN domains are predicted to play roles in Ras-like GTPase signaling pathwaysDDB0232433 CDS636558 4197 + 0.250655
DDB_G0295669 DDB_G0295669 isochorismatase (also: 23 dihydro-23 dihydroxybenzoate synthase) catalyses the conversion of isochorismate Hsub2subO to 23-dihydroxybenzoate and pyruvate conserved in bacteria fungi amoeba and plantsDDB0232433 CDS769784 552 - 0.318841
DDB_G0295683 DDB_G0295683 DDB0232433 CDS1769740 4770 + 0.291614
DDB_G0295691 DDB_G0295691 shares a region of similarity with proteins of unknown functions contains eight predicted transmembrane domainsDDB0232433 CDS883760 1164 + 0.256873
DDB_G0295705 DDB_G0295705 DDB0232433 CDS621820 2340 - 0.191026
DDB_G0295741 DDB_G0295741 contains a C-terminal FR47-like N-acyltransferase-like domain has similarity to H. sapiens glycine N-acyltransferase-like protein 1 (GLYATL1)DDB0232433 CDS842775 909 - 0.246425
DDB_G0295791 DDB_G0295791 DDB0232433 CDS1765779 2322 - 0.216193
DDB_G0295793 DDB_G0295793 DDB0232433 CDS2856788 1974 + 0.340426
DDB_G0295797 DDB_G0295797 DDB0232433 CDS1762213 1338 + 0.286248
DDB_G0295799 DDB_G0295799 DDB0232433 CDS1763747 753 - 0.289509
DDB_G0295801 DDB_G0295801 DDB0232433 CDS1765213 408 + 0.308824
DDB_G0295803 DDB_G0295803 DDB0232433 CDS1775198 486 + 0.162551
DDB_G0295841 DDB_G0295841 DDB0232433 CDS1614536 2094 + 0.206781
DDB_G0295843 DDB_G0295843 contains a partial serinethreonine protein kinase catalytic domain that is similar to eukaryotic translation initiation factor 2-alpha kinase however the domain does not have the catalytic aspartate conserved.DDB0232433 CDS2093907 1827 - 0.300493
DDB_G0304683 DDB_G0304683 DDB0232433 CDS1860016 2583 - 0.258227
DDB_G0349136 DDB_G0349136 DDB0232433 CDS1350474 3105 + 0.260225
DDB_G0349138 DDB_G0349138 DDB0232433 CDS1354305 492 + 0.243902
DDB_G0349347 DDB_G0349347 DDB0232433 CDS3330793 354 - 0.282486
DG1098 DDB_G0293192 DDB0232433 CDS2617515 6132 + 0.21396
Dd5P3 DDB_G0292392 DDB0232433 CDS1583730 4140 - 0.320773
H2Bv1 DDB_G0293758 DDB0232433 CDS3289579 681 - 0.330396
X69101 DDB_G0294501 DDB0232433 CDS3385382 116 + 0.362069
abcA1 DDB_G0291994 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS1093282 2634 + 0.319286
abcA3 DDB_G0293436 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS2880255 5109 + 0.267371
abcA6 DDB_G0291245 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS313947 4896 - 0.278595
abcA9 DDB_G0291980 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS1089711 2538 - 0.289992
abcB1 DDB_G0293416 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS2861187 2730 - 0.279487
abcB2 DDB_G0293438 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS2891271 4194 - 0.313782
abcB3 DDB_G0291714 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS667903 4299 + 0.32682
abcB5 DDB_G0292554 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS1786504 2094 - 0.294651
abcC7 DDB_G0291243 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS391713 3987 - 0.251818
abcD2 DDB_G0293194 half transporter consisting of one ABC domain and one transmembrane domainDDB0232433 CDS2712310 2226 + 0.32929
abcG10 DDB_G0292986 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS2306939 4401 + 0.310384
abcG9 DDB_G0293450 full transporter consisting of two ABC domains and two transmembrane domainsDDB0232433 CDS2911255 4347 + 0.326202
abcG_ps2 DDB_G0293466 putative pseudogene fragment similar to abcG family proteins including DDB0232433 CDS2916261 189 + 0.365079
abcH1 DDB_G0292384 DDB0232433 CDS1754062 801 + 0.280899
abpF DDB_G0291229 actin-binding protein that localizes to the centrosome expression enhanced in myosin II knock-out cells purified protein makes ring-like structures in vitro (from K. R. Niebling's Thesis (1993) James Spudich Lab Standford U.)DDB0232433 CDS145941 7095 - 0.297252
act24_ps DDB_G0293368 putative pseudogene contains an incomplete actin domain similar to DDB0232433 CDS2797121 126 - 0.31746
adcA DDB_G0292924 contains an arrestin domain found in beta-arrestin which functions in regulation of beta-adrenergic receptors br bNomenclature conflictb: Do not confuse adcA (arrestin domain-containing protein) with dcd3A (alkaline dihydroceramidase)DDB0232433 CDS2277184 1743 - 0.365462
adi1 DDB_G0291376 DDB0232433 CDS203637 444 - 0.259009
adkB DDB_G0292730 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearDDB0232433 CDS2003598 699 - 0.291846
adprt2 DDB_G0292820 putative ortholog of PARP2 catalyzes ADP-ribosylation a posttranslational protein modification in which the ADP-ribose moiety of NAD is transferred onto specific amino acid side chains of cell surface secreted cytosolic or nuclear proteinsDDB0232433 CDS2124835 2103 + 0.324774
adprt3 DDB_G0291788 catalyzes ADP-ribosylation a posttranslational protein modification in which the ADP-ribose moiety of NAD is transferred onto specific amino acid side chains of cell surface secreted cytosolic or nuclear proteins DDB0232433 CDS795337 7611 + 0.327027
ak1 DDB_G0292150 atypical protein serinethreonine kinase contains an N-terminal ArfGap domain and a C-terminal Alpha kinase domainDDB0232433 CDS1289254 4059 + 0.319783
alg11 DDB_G0292118 CAZy family GT4 catalyzes N-linked mannosylationDDB0232433 CDS1220852 1518 + 0.28722
alrA DDB_G0293850 involved in regulation of aggregate size member of aldo-keto reductase family which reduces CO to C-OH in aldehydes and ketonesDDB0232433 CDS3404974 894 + 0.325503
amdA DDB_G0292266 required for spore formation inhibits the formation of aspidocytes catalyzes the reaction AMP Hsub2subO IMP NHsub3subbr bNomenclature conflict: b Do not confuse this gene with amd1 encoding S-adenosylmethionine decarboxylaseDDB0232433 CDS1491265 2373 - 0.313527
anapc7 DDB_G0292470 component of the anaphase-promoting complexcyclosome (APCC) a cell cycle-regulated ubiquitin ligase that controls progression through the cell cycleDDB0232433 CDS1686299 1743 + 0.243259
ap1s2 DDB_G0295711 DDB0232433 CDS619891 465 - 0.260215
apeh DDB_G0292456 DDB0232433 CDS1668118 2295 - 0.290632
aplD DDB_G0293010 DDB0232433 CDS2590611 432 + 0.252315
aplP DDB_G0292508 DDB0232433 CDS1757953 486 - 0.279835
arcC DDB_G0292804 component of the Dictyostelium Arp2Arp3 complexDDB0232433 CDS2116342 525 + 0.361905
argJ DDB_G0291916 catalyzes the reactions acetyl-CoA L-glutamate CoA N-acetyl-L-glutamate bandb Nsub2sub-acetyl-L-ornithine L-glutamate L-ornithine N-acetyl-L-glutamateDDB0232433 CDS940721 1329 - 0.311512
arpE DDB_G0291728 ortholog of the conserved actin related protein ARP5 in mammalian named ACTR5 the yeast protein is a nuclear actin-related protein involved in chromatin remodelingbr bNomenclature conflict:b Do not confuse this gene with arcB the 34 kDa component of the Arp2Arp3 complex.DDB0232433 CDS714429 2055 + 0.287591
arsA DDB_G0293528 homologous to bacterial genes that are involved in the transport of arsenate selenate and other anionic compounds outside the cellDDB0232433 CDS3193289 990 - 0.285859
atg1 DDB_G0292390 Dictyostelium homolog of yeast atg1 belongs to the ULK (Unc-51-like kinase) family of kinases required for macroautophagyDDB0232433 CDS1694801 2007 + 0.255605
atp12 DDB_G0292678 DDB0232433 CDS1937753 993 - 0.257805
atp5C1 DDB_G0292306 DDB0232433 CDS1438508 921 + 0.373507
atr1 DDB_G0291380 atypical PIKK family protein kinase similar to protein kinase ATR which modulates cell cycle progression and DNA repair in other organisms ATR phosphorylates Rad17 histone H2AX p53 and Nbs1DDB0232433 CDS214264 9474 - 0.259552
bcs1lB DDB_G0291910 conserved mitochondrial chaperone necessary for the assembly of mitochondrial respiratory chain complex III Dictyostelium has a second BCS1-like protein DDB0232433 CDS923283 1377 + 0.304285
blm DDB_G0292130 E. coli ATP-dependent DNA helicase RecQ is involved in genome maintenance this is the ortholog of the H. sapiens Bloom syndrome protein defects in BLM cause genetic instability including a high level of sister chromatid exchanges associated with a greatly increased predisposition to a wide range of cancersDDB0232433 CDS1240457 3780 + 0.286243
bub1 DDB_G0292676 probable mitotic checkpoint serinethreonine-protein kinase a component of the mitotic checkpoint that delays anaphase until all chromosomes are properly attached to the mitotic spindle.DDB0232433 CDS1933350 3921 + 0.285896
bub3 DDB_G0292134 ortholog of BUB3 a mitotic checkpoint protein in human a kinetochore protein that interacts with BUB1DDB0232433 CDS1247461 996 - 0.346386
bxdc1 DDB_G0292216 ortholog of S. cerevisiae RPF2 and H. sapiens BXDC1 a nucleolar protein involved in the assembly of the large ribosomal subunitDDB0232433 CDS1328996 924 - 0.29329
carmil DDB_G0292386 DDB0232433 CDS1735919 3153 - 0.326673
cbfB DDB_G0293470 similar to Dictyostelium cbfA contains a jmjC domainDDB0232433 CDS2928133 4425 - 0.250847
cct2 DDB_G0291358 DDB0232433 CDS177191 1599 - 0.358349
cct4 DDB_G0292872 DDB0232433 CDS2188382 1602 - 0.373908
cct7 DDB_G0291225 DDB0232433 CDS201367 1668 + 0.41307
cdc26 DDB_G0293230 cdc26 ortholog missing about half of the carboxyl terminusDDB0232433 CDS2676069 210 + 0.304762
cdc7 DDB_G0292152 similar to S. cerevisiae cell division control protein 7 (CDC7) a serinethreonine kinase required for mitosis and meiosisDDB0232433 CDS1294776 3186 + 0.23666
cepA DDB_G0292142 DDB0232433 CDS1258240 1041 + 0.232469
cepK DDB_G0293544 localizes to the corona of the centrosome and to centromeres affects cell growth and chemotactic motility and is involved in the interaction with the nuclear envelopeDDB0232433 CDS2990987 6333 - 0.225959
chdC DDB_G0293012 CHD gene family protein containing a chromodomain a helicase domain and a DNA-binding domain chromatin remodeling complex subunit R (CHR) protein SWI2SNF2 homologDDB0232433 CDS2321154 9216 + 0.312174
cirh1a DDB_G0293462 DDB0232433 CDS2920900 1389 + 0.24982
clcF DDB_G0293130 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimersDDB0232433 CDS2574912 2430 + 0.295885
cluA DDB_G0292806 a 150 kD protein responsible for distribution of mitochondria in the cell and cytokinesis in the null mutant mitochondria are clustered in the cell centerDDB0232433 CDS2247666 3963 - 0.354529
cnrK DDB_G0292120 DDB0232433 CDS1222744 3645 - 0.266941
coaA DDB_G0293898 DDB0232433 CDS3517422 441 + 0.387755
cofB DDB_G0291970 coding region identical to cofA the 15 kDa actin severing proteinDDB0232433 CDS1044327 414 - 0.391304
cog6 DDB_G0292784 highly similar to COG6 component of the conserved oligomeric Golgi complex which is composed of eight different subunitsDDB0232433 CDS2027082 2022 - 0.273986
colA DDB_G0292696 collagen-binding surface protein Cna-like B-type domain-containing large proteinDDB0232433 CDS1959495 33312 - 0.32826
colA_ps5 DDB_G0291594 putative pseudogene small fragment similar to the large colossin A gene DDB0232433 CDS587234 171 - 0.321637
colA_ps6 DDB_G0293024 putative pseudogene small fragment similar to the large colossin A gene DDB0232433 CDS2342348 210 - 0.361905
comG DDB_G0292270 catalyzes the reaction aldehyde NAD Hsub2subO an acid NADH HDDB0232433 CDS1403334 1413 + 0.339703
commd1 DDB_G0292074 belongs to a family of conserved mammalian HCaRG (hypertension-related calcium-regulated gene) proteinsDDB0232433 CDS1155156 564 - 0.210993
commd8 DDB_G0292688 belongs to a family of conserved mammalian HCaRG (hypertension-related calcium-regulated gene) proteinsDDB0232433 CDS1952596 618 + 0.205502
copZb DDB_G0293086 zeta subunit of the coatomer complex involved in intracellular protein transport there is another gene encoding a zeta subunit DDB0232433 CDS2460151 537 + 0.266294
coq4 DDB_G0292620 similar to S. cerevisiae COQ4 a protein of unknown function required for ubiquinone biosynthesisDDB0232433 CDS1849018 861 + 0.269454
coq6 DDB_G0291440 similar to S. cerevisiae COQ6 a putative flavin-dependent monooxygenase involved in ubiquinone (Coenzyme Q) biosynthesisDDB0232433 CDS308878 1488 + 0.252016
cpiA DDB_G0291834 similar to animal and plant cystatin A1 member of the stefin family of cysteine protease inhibitorsDDB0232433 CDS838074 285 + 0.4
cpnA DDB_G0293008 Ca(2)-dependent phospholipid-binding protein contains two C2 domains and a VWFA domain.DDB0232433 CDS2395700 1803 + 0.321131
cpnF DDB_G0291498 Ca(2)-dependent phospholipid-binding protein contains two C2 domains and a VWFA domain.DDB0232433 CDS437512 1653 - 0.255898
cpras2 DDB_G0293376 contains a circularly permuted GTPase domain with the conserved motifs G1-G2 lying downstream of the G3-G4-G5 motifs large protein of unknown function whose domain composition is not conserved a closely related ortholog is found in D. purpureum DDB0232433 CDS2805934 11802 - 0.295543
csn3 DDB_G0291848 subunit of the COP9 signalosome (CSN) a complex of the ubiquitin-proteasome pathway composed of eight subunits (CSN1-8) DDB0232433 CDS766772 1257 - 0.287192
csn4 DDB_G0293844 subunit of the COP9 signalosome (CSN) a complex of the ubiquitin-proteasome pathway composed of eight subunits (CSN1-8) DDB0232433 CDS3378445 1182 + 0.302876
csn6 DDB_G0293180 subunit of the COP9 signalosome (CSN) a complex of the ubiquitin-proteasome pathway composed of eight subunits (CSN1-8) DDB0232433 CDS2499532 930 + 0.283871
cspB DDB_G0292808 DDB0232433 CDS2157251 177 - 0.38983
ctaA DDB_G0293004 DDB0232433 CDS2385585 3897 - 0.308442
ctnnbl1 DDB_G0292778 DDB0232433 CDS2017543 1578 + 0.225602
ctrA DDB_G0291227 similar to mammalian SLC7A1-4 (solute carrier family 7 members 1 to 4) multi-pass membrane protein contains 15 predicted transmembrane domainsDDB0232433 CDS403181 1689 - 0.335702
culA DDB_G0291972 very similar to mammalian cullin 1 (CUL1) involved in ubiquitin-mediated protein degradation which in Dictyostelium controls PKA function and regulates cell differentiationDDB0232433 CDS977829 2313 - 0.285776
culD DDB_G0292794 very similar to mammalian cullin 4 (CUL4A and CUL4B) acts as scaffold for ubiquitin ligases (E3) involved in ubiquitin-mediated protein degradationDDB0232433 CDS2047275 2409 - 0.28352
cupD DDB_G0293536 highly conserved protein family up-regulated by Ca2 expressed throughout vegetative cells and in the cortex of aggregating cellsDDB0232433 CDS3204161 1905 - 0.303412
cyc1 DDB_G0292594 ortholog of the heme-containing component of the cytochrome b-c1 complex (CYC1) which accepts electrons from Rieske protein and transfers electrons to cytochrome c in the mitochondrial respiratory chainDDB0232433 CDS1821453 828 + 0.390097
cyp508B2_ps DDB_G0293080 putative pseudogene related to the cytochrome P450 familyDDB0232433 CDS2448065 1254 - 0.186603
cyp508C1 DDB_G0292792 DDB0232433 CDS2044931 1488 - 0.22043
cyp508D1 DDB_G0292790 DDB0232433 CDS2042922 1449 + 0.26432
cyp516A1 DDB_G0292168 DDB0232433 CDS1087783 1464 + 0.267076
cyp519D1 DDB_G0291448 DDB0232433 CDS323966 1701 - 0.240447
cyp520A1 DDB_G0292496 DDB0232433 CDS1743792 1611 + 0.259466
cyp520B1 DDB_G0291702 DDB0232433 CDS657386 1446 + 0.239281
cyp521A1 DDB_G0293738 DDB0232433 CDS3236989 1476 + 0.250677
cysK DDB_G0292840 catalyzes the reaction O-acetyl-L-serine Hsub2subS L-cysteine acetateDDB0232433 CDS2136817 1137 + 0.333333
dcd1B DDB_G0292768 wealky similar to acid ceramidase which catalyzes the reaction N-acylsphingoside Hsub2subO a carboxylate sphingosineDDB0232433 CDS2039368 1503 - 0.293413
dcd2A DDB_G0293538 ceramidase bearing more similarity with neural and alkaline ceramidases however pH optimum of the enzyme is 3DDB0232433 CDS3091013 2145 + 0.336597
dduC DDB_G0292604 downregulated in the uninfected DDB0232433 CDS1828931 372 + 0.276882
ddx17 DDB_G0293168 conserved RNA helicase very similar to mammalian DDX17 (p72) and DDX5 (p68) and yeast DBP2DDB0232433 CDS2360817 2358 - 0.370229
ddx5 DDB_G0293036 DDB0232433 CDS2373448 2094 + 0.258835
ddx51 DDB_G0293740 DDB0232433 CDS3249527 1692 - 0.229905
ddx55 DDB_G0291588 ortholog of H. sapiens DDX55 and S. cerevisiae SBP4 (Suppressor of PAB1) SBP4 required for synthesis of 60S ribosomal subunitsDDB0232433 CDS577637 1992 - 0.270582
ddx6 DDB_G0291804 ortholog of H. sapiens DDX6 and S. cerevisiae DHH1 (DExDH-box Helicase)DDB0232433 CDS773358 1272 + 0.367925
dia2 DDB_G0291253 lysine and leucine rich protein specifically expressed during the transition from growth to development located in the ER in vegetative cells and in prespore vesicles during developmentDDB0232433 CDS434272 456 - 0.276316
dimB DDB_G0291372 required for expression of prestalk genes in response to DIF-1 optimal binding to DNA sequences containing CACADDB0232433 CDS197774 1809 + 0.310669
dnaja1 DDB_G0291568 conserved molecular chaperone DnaJ homolog subfamily A member 1DDB0232433 CDS558877 1380 + 0.365942
docA DDB_G0291974 DDB0232433 CDS1105862 6666 + 0.30348
docC DDB_G0292004 bCommunity annotation:b DDB G0292004 (DockC) is threefold overexpressed in a dicty strain lacking the retinoblastoma-like gene rblA (Doquang et al in preparation). Most genes involved in cell cycle progression but relatively few other genes are upregulated in this strain suggesting that DockC has a role in the cell cycle possibly in cytokinesis. DockA B and D are not regulated by rblA. Harry MacWilliams May 2009br A c-terminal GFP fusion localizes to mitochondria. Rod-shaped and round mitochondria are seen in different cells. Cells with round mitochondria tend to be brighter suggesting that docC might influence the rod to round transition. Harry MacWilliams February 2011br DDB0232433 CDS999481 5211 + 0.264824
dph4 DDB_G0292980 DDB0232433 CDS2253222 513 + 0.224172
drap1 DDB_G0292510 DDB0232433 CDS1574061 1653 - 0.255898
drcA DDB_G0293840 belongs to the glutathione S-transferase superfamily catalzyes the first step in the breakdown of differentiation-inducing factor 1DDB0232433 CDS3374878 828 + 0.270531
dscE DDB_G0292552 DDB0232433 CDS1899844 774 - 0.320413
dst3 DDB_G0291267 putative protein serinethreonine kinase the kinase domain is similar to mammalian STK3 and STK4 (MST) kinases and other STE20-like kinases stress-responsive kinaseDDB0232433 CDS35064 1689 - 0.351095
dstC DDB_G0293532 DDB0232433 CDS3253627 2796 - 0.331545
dtd DDB_G0291273 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr) in yeast substrate specifity may be broaderDDB0232433 CDS40029 456 + 0.300439
dus3l DDB_G0292686 ortholog of S. cerevisiae DUS3 and the animal DUS3L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232433 CDS1949203 2016 + 0.291171
dus4l DDB_G0291360 ortholog of S. cerevisiae DUS4 and the animal DUS4L catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of tRNAsDDB0232433 CDS180987 1035 - 0.282126
dut DDB_G0293374 catalyses the reaction Hsub2subO dUTP pyrophosphate dUMP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232433 CDS2804871 540 - 0.327778
dync1li1 DDB_G0292904 DDB0232433 CDS2245112 1515 - 0.280528
dyrk2 DDB_G0293750 DDB0232433 CDS3272270 2748 + 0.306405
ecmF DDB_G0291291 similar to staA and other short proteins expressed in the prestalk region expressed in pstA cellsDDB0232433 CDS69233 387 + 0.299742
ecmG DDB_G0292224 expressed in pstAO cells expression is decreased in DDB0232433 CDS1325480 366 + 0.325137
ecmH DDB_G0292220 expression is decreased in DDB0232433 CDS1327483 369 + 0.284553
ecmI DDB_G0292222 expression is decreased in DDB0232433 CDS1326474 366 + 0.284153
eif2b2 DDB_G0291271 DDB0232433 CDS38541 1167 - 0.288775
eif3E DDB_G0293052 EIF3E ortholog the eukaryotic initiation factor p48 subunit In human binds to the 40S ribosome and promotes the binding of methionyl-tRNAi and mRNA is composed of at least 12 different subunitsDDB0232433 CDS2402071 1578 + 0.32763
eif3F DDB_G0293254 EIF3S5 ortholog the eukaryotic initiation factor epsilon subunit In human binds to the 40S ribosome and promotes the binding of methionyl-tRNAi and mRNA is composed of at least 12 different subunitsDDB0232433 CDS2626118 855 - 0.326316
eif3K DDB_G0291404 EIF3SK ortholog the eukaryotic initiation factor 3 subunit in human binds to the 40S ribosome and promotes the binding of methionyl-tRNAi and mRNA is composed of at least 12 different subunitsDDB0232433 CDS259277 741 + 0.311741
eloA DDB_G0292896 fatty acid elongase with substrate specificity for monounsaturated fatty acids in particular elongates 16:1DDB0232433 CDS2229613 816 - 0.261029
empB DDB_G0293540 DDB0232433 CDS3021203 630 + 0.314286
epnA DDB_G0291512 epsin interacts dynamically with clathrin-coated pits at the plamid membrane and plays a role in cytokinesis and spore morphology regulates Hip1r phosphorylation with its ENTH domainDDB0232433 CDS459846 2061 + 0.319748
ergic3 DDB_G0292002 conserved protein that might be involved in transport between endoplasmic reticulum and Golgi contains two putative transmembrane domains DDB0232433 CDS996494 1152 - 0.31684
esf2 DDB_G0293576 DDB0232433 CDS3063826 891 - 0.258137
exo1 DDB_G0291570 highly similar to S. pombe exonuclease I a 5'-3' exonuclease involved in DNA repair recombination replication and telomere integrityDDB0232433 CDS561048 3141 + 0.266794
exoc3 DDB_G0293520 subunit of the exocyst complex which targets secretory vesicles to active sites of exocytosisDDB0232433 CDS2981805 2352 + 0.274235
exoc6 DDB_G0293936 subunit of the exocyst complex which targets secretory vesicles to active sites of exocytosisDDB0232433 CDS3528888 3078 - 0.273229
expl8 DDB_G0293182 similar to plant expansins which modify the cell wall to allow expansion during cell growth but with a divergent carboxyl terminus contains a predicted signal peptideDDB0232433 CDS2533687 1458 + 0.310014
expl9 DDB_G0293148 similar to plant expansins which modify the cell wall to allow expansion during cell growth but with a divergent carboxyl terminus contains a predicted signal peptideDDB0232433 CDS2538129 1608 + 0.31903
fahd2 DDB_G0293650 DDB0232433 CDS3209379 918 - 0.308279
fam96A DDB_G0292558 DDB0232433 CDS1882209 453 - 0.233996
fdfT DDB_G0292072 catalyzes the reaction farnesyl diphosphate diphosphate presqualene diphosphateDDB0232433 CDS1153510 1251 + 0.339728
febA DDB_G0291990 DDB0232433 CDS1041751 312 + 0.358974
fhbA DDB_G0292378 DDB0232433 CDS1649565 1194 - 0.333333
fhbB DDB_G0292380 DDB0232433 CDS1651520 1272 - 0.318396
fhkA DDB_G0293656 CAMK group RAD53 family protein kinase similar to mammalian cell cycle checkpoint kinases chk2 contains a forkhead-associated (FHA) domain a phosphopeptide recognition domain found in many regulatory proteinsbrbr bCommunity annotation:b The five fhk-X genes differ substantially in their response to the disruption of the retinoblastoma-like gene rblA. FhkA is substantially and highly signficantly upregulated in the ko strain while none of the other genes show major changes. Consistent with its regulation the fhkA promoter contains a putative E2F-type binding site (TTTGCGCCTTTT). Virtually all genes associated with replication fork progression are upregulated in the rblA disruptant these include cdc45 all mcm genes all gins genes all rfc genes four polA subunits three polD subunits two putatitive polE subunits PCNA the single-strand binding protein rfa1 the flap endonuclease repG as well as DNA ligase-1 and topoisomerase-2. All these genes show overexpression factors ranging from 4 to 15DDB0232433 CDS3219230 1782 - 0.231201
fncI DDB_G0293476 ortholog of Fanconi anaemia complementation group I protein involved DNA cross-link repair null mutant is sensitive to DNA damaging agents brbr mammalian ortholog is part of the Fanconi anaemia nuclear complex that includes FANC A B C E F G L and M the FA complex interacts with ube2t a E2 ubiquitin-conjugating enzyme to monoubiquitinate FANCD2 and FANCI. Ubiquinated FANCD2 and FANCI form a complex that colocalizes at sites of DNA damage with the FANCJ helicase as well as FANCN and FANCD1 in human mutations in this gene cause Fanconi anaemia an autosomal recessive disorder affecting all bone marrow elements Dictyostelium has orthologs for DDB0232433 CDS2936457 5355 + 0.256209
fncL DDB_G0292744 ortholog of Fanconi anaemia complementation group L protein involved DNA cross-link repair null mutant is sensitive to DNA damaging agents brbr mammalian ortholog is part of the Fanconi anaemia nuclear complex that includes FANC A B C E F G L and M the FA complex interacts with ube2t a E2 ubiquitin-conjugating enzyme to monoubiquitinate FANCD2 and FANCI. Ubiquinated FANCD2 and FANCI form a complex that colocalizes at sites of DNA damage with the FANCJ helicase as well as FANCN and FANCD1 in human mutations in this gene cause Fanconi anaemia an autosomal recessive disorder affecting all bone marrow elements Dictyostelium has orthologs for DDB0232433 CDS2072501 1440 - 0.230556
folC DDB_G0292632 catalyzes the reaction L-glutamate H4PteGlu(n) ATP H4PteGlu(n1) phosphate ADP responsible for the addition of a polyglutamate tail to folate and folate derivativesDDB0232433 CDS1872495 1881 + 0.279638
forJ DDB_G0291378 contains a SMADFHA domain an actin-binding FH2 (formin homology 2) domain and a RmlC-like cupin domainDDB0232433 CDS205952 7641 + 0.272085
frmA DDB_G0291303 involved in substrate adhesion by regulating the turnover of paxillintalin adhesion sites also involved in cell-cell adhesion and affecting tip formation during development.DDB0232433 CDS93960 3465 - 0.294372
frpA DDB_G0292068 contains two N-terminal calponin homology (CH) domains which is similar to fimbrins and a long unrelated C-terminal tailDDB0232433 CDS1144263 3291 - 0.267396
fscC DDB_G0292204 similar to G-protein-coupled receptors and to frizzled and smoothened proteins but does not contain the N-terminal CRD (cysteine rich domain) domain predicted to have 7 transmembrane domains and a putative signal peptideDDB0232433 CDS1266213 1536 + 0.276693
fscF DDB_G0292064 similar to G-protein-coupled receptors and to frizzled and smoothened proteins but does not contain the N-terminal CRD (cysteine rich domain) domain predicted to have 7 transmembrane domains and a putative signal peptideDDB0232433 CDS1134651 1371 + 0.22903
fscG DDB_G0292156 has similarity to G-protein-coupled receptors frizzled and smoothened like proteins but does not contain the N-terminal CRD (cysteine rich domain) domain predicted to have 7 transmembrane domains and a putative signal peptideDDB0232433 CDS1137104 1362 + 0.236417
fscH DDB_G0292100 similar to G-protein-coupled receptors and to frizzled and smoothened proteins but does not contain the N-terminal CRD (cysteine rich domain) domain predicted to have 7 transmembrane domains and a putative signal peptideDDB0232433 CDS1184434 1602 - 0.22784
fscJ DDB_G0292102 similar to G-protein-coupled receptors and to frizzled and smoothened proteins but does not contain the N-terminal CRD (cysteine rich domain) domain predicted to have 7 transmembrane domains and a putative signal peptideDDB0232433 CDS1187184 1224 - 0.296569
fut9 DDB_G0293768 CAZy family GT10 some proteins in the GT10 family help form the basis of blood group antigensDDB0232433 CDS3300772 1668 - 0.311151
fxn DDB_G0293246 yeast and human orthologs regulates mitochondrial iron accumulation mutations in human homolog cause Friedrich's ataxiaDDB0232433 CDS2633195 582 - 0.261168
gacE DDB_G0293654 DDB0232433 CDS3215377 3399 + 0.28832
gacEE DDB_G0291840 DDB0232433 CDS819813 1713 + 0.258611
gacV DDB_G0293510 DDB0232433 CDS2976341 1563 + 0.252719
galK DDB_G0292112 DDB0232433 CDS1203261 1506 + 0.317397
gcvT DDB_G0292326 catalyzes the reaction protein-S-aminomethyldihydrolipoyllysine tetrahydrofolate protein-dihydrolipoyllysine 510-methylenetetrahydrofolate NHsub3subDDB0232433 CDS1484064 1212 - 0.348185
gdt7 DDB_G0292314 highly similar to other Dictyostelium GDT proteins however it does not contain a protein kinase domainDDB0232433 CDS1457514 2406 + 0.293433
gefF DDB_G0293006 putative Ras guanine nucleotide exchange factor promotes the exchange of GDP for GTP on Ras small GTPases thus converting them into the active formDDB0232433 CDS2493284 3384 - 0.330378
gerD DDB_G0291856 DDB0232433 CDS926086 4338 + 0.297372
gflC_ps DDB_G0293458 putative pseudogene fragment similar to D. discoideum gene DDB0232433 CDS2917476 264 + 0.359848
ggps1 DDB_G0293588 ortholog of the mammalian geranylgeranyl diphosphate synthase 1 includes the enzymes dimethylallyltransferase (EC 2.5.1.1) geranyltranstransferase (EC 2.5.1.10) and farnesyltranstransferase (EC 2.5.1.29)DDB0232433 CDS3093908 912 - 0.25
gins2 DDB_G0293564 subunit 2 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevisDDB0232433 CDS3050595 672 - 0.25
gins3 DDB_G0291506 subunit 3 of the conserved replication complex GINS which is essential for initiation of DNA replication in X. laevisDDB0232433 CDS450396 798 - 0.211779
gloA DDB_G0291265 catalyzes the reaction glutathione methylglyoxal S-lactoylglutathioneDDB0232433 CDS28140 411 + 0.350365
gloB2 DDB_G0291482 catalyzes the reaction S-lactoyl-glutathione H2O reduced glutathione D-lactateDDB0232433 CDS411372 879 + 0.335609
gluA DDB_G0292810 DDB0232433 CDS2240229 2466 - 0.364152
gnrB DDB_G0291536 DDB0232433 CDS490155 5088 - 0.306211
gnt2 DDB_G0291241 DDB0232433 CDS49486 1212 - 0.334158
golt1 DDB_G0292868 conserved protein might be involved in fusion of ER-derived transport vesicles with the Golgi complexDDB0232433 CDS2183910 417 - 0.270983
gpn1 DDB_G0293220 DDB0232433 CDS2684279 1191 + 0.309824
grlE DDB_G0291356 major GABA receptor during late development GABA-B receptor with distinctive '7TM' signature also similar to metabotropic glutamate receptors also binds glutamate in a competitive manner to GABA seems to interact with two different trimeric G-proteins depending on ligand one that stimulates the PI3 kinase pathway and one acting through GDDB0232433 CDS173621 2451 - 0.337005
grl_ps DDB_G0293232 putative pseudogene fragment very similar to grl (metabotropic Glutamate Receptor-Like) genesDDB0232433 CDS2665263 135 + 0.348148
grpA DDB_G0293248 involved in the unconventional secretory pathway of acbA the precurser of SDF-2 (spore differentiation factor 2) ortholog of the mammalian golgi reassembly stacking protein 2 (golgi reassembly-stacking protein of 55 kDa)DDB0232433 CDS2631684 984 + 0.311992
grwd1 DDB_G0291566 ortholog of the mammalian GRWD1 contains several WD-40 repeatsDDB0232433 CDS556339 1449 - 0.354727
gshB DDB_G0291756 catalyzes the reaction ATP gamma-L-glutamyl-L-cysteine glycine ADP phosphate glutathione in the synthesis of glutathione (GSH)DDB0232433 CDS695138 1431 - 0.29979
gtaP DDB_G0295707 DDB0232433 CDS624702 2088 - 0.287356
gtf2h4 DDB_G0293228 ortholog of S. cerevisiae TFB2 subunit of TFIIH and nucleotide excision repair factor 3 complexes involved in transcription initiation required for nucleotide excision repairDDB0232433 CDS2676500 1452 - 0.303719
gtpbp1 DDB_G0292538 ortholog of the mammalian GTPBP1 and very similar to GTPBP2 contains a translation elongation factor EFTuEF1A domain 2 and C-terminal domainDDB0232433 CDS1635942 2034 + 0.357915
guf1 DDB_G0291708 ortholog of H. sapiens and S. cerevisiae GUF1 a mitochondrial GTP binding protein believed to be involved in protein biosynthesisDDB0232433 CDS641379 2058 + 0.348397
gxcJ DDB_G0293978 DDB0232433 CDS3500795 3468 + 0.241638
gxcKK DDB_G0293340 DDB0232433 CDS2757100 2004 - 0.25
gxcO DDB_G0293396 DDB0232433 CDS2833626 2490 + 0.244177
gxcU DDB_G0291996 DDB0232433 CDS972420 2961 - 0.311381
gxcY DDB_G0293266 DDB0232433 CDS2602478 3231 - 0.268957
gxcY_ps DDB_G0293338 putative pseudogene fragment similar to D. discoideum gene DDB0232433 CDS2754113 579 + 0.246978
gxcZ DDB_G0293928 DDB0232433 CDS3506582 3087 - 0.259475
hacl1 DDB_G0292402 putative 2-hydroxyacyl-CoA lyase which cleaves a 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehydeDDB0232433 CDS1553647 1743 - 0.324154
hacl1_ps DDB_G0292762 putative pseudogene 2-hydroxyacyl-CoA lyase (hacl) family proteinDDB0232433 CDS2051654 138 + 0.355072
hao DDB_G0291814 single hao ortholog in D. discoideum very similar to mammalian HAO1 an enzyme of the glycolate pathwayDDB0232433 CDS804510 1167 + 0.305913
hatC DDB_G0292136 almost identical to hisactophilin I and II (hatA and hatB) histidine-rich pH-dependent actin binding proteinsDDB0232433 CDS1249171 360 - 0.363889
helA DDB_G0292992 DDB0232433 CDS2367392 3276 + 0.291209
hemE DDB_G0292294 catalyzes the reaction uroporphyrinogen III coproporphyrinogen 4 COsub2sub in heme biosynthesisDDB0232433 CDS1412890 1095 - 0.340639
hemG DDB_G0292040 DDB0232433 CDS1063213 1599 + 0.238274
hibA DDB_G0292566 DDB0232433 CDS1891263 966 - 0.356108
hssA DDB_G0293360 multicopy suppressor of dstA expressed in pstAO cells highly similar to other short proteins expressed in the prestalk regionDDB0232433 CDS2789218 282 + 0.429078
hssB DDB_G0293358 DDB0232433 CDS2787551 282 - 0.382979
idhB DDB_G0293872 catalyzes the reaction isocitrate NAD 2-oxoglutarate CO2 NADHDDB0232433 CDS3407770 1083 - 0.369344
if1 DDB_G0291988 belongs to the wider family of mitochondrial F1F(o)-ATPase inhibitors contains a conserved ATPIF1 domainDDB0232433 CDS1251863 318 - 0.339623
iliM DDB_G0292328 similar to bacterial aromatic-ring hydroxylases and fungal monooxygenases induced by Legionella pneumophila infectionDDB0232433 CDS1489407 1272 - 0.259434
iliO DDB_G0291520 contains a DRB0094-related RNA ligase domain conserved in bacteria phages and fungi similar to D. purpureum protein induced by Legionella pneumophila infectionDDB0232433 CDS473965 1305 - 0.300383
iliQ DDB_G0292926 contains a large ankyrin repeat region induced by Legionella pneumophila infectionDDB0232433 CDS2280235 2490 + 0.214458
ino80 DDB_G0292358 similar to S. cerevisiae INO80 an ATPase that forms a large complex containing actin and several actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro chromatin remodeling complex subunit R (CHR) protein SWI2SNF2 homologDDB0232433 CDS1406177 6390 + 0.308607
iplA DDB_G0292564 required for cAMP-stimulated Ca2 uptakeDDB0232433 CDS1805115 9534 - 0.266415
ipo13A DDB_G0293110 ortholog of importin 13 also known as Ran-binding protein 13 a nuclear transport receptor serves as receptor for nuclear localization signals (NLS) in cargo substrates and mediates docking of the importinsubstrate complex to the nuclear pore complexDDB0232433 CDS2522191 3195 + 0.252895
iptB DDB_G0291528 DDB0232433 CDS482754 1569 + 0.203952
isw DDB_G0292948 similar to ISWI and mammalian SMARCA ATPases involved in nucleosome remodeling chromatin remodeling complex subunit R (CHR) protein SWI2SNF2 homologDDB0232433 CDS2254360 3666 + 0.336061
itfg1 DDB_G0292418 very conserved protein the Dictyostelium protein contains 7 putative FG-GAP repeats conserved protein also known as T-cell immunomodulatory protein contains a putative N-terminal signal peptide and a C-terminal transmembrane domain.DDB0232433 CDS1576374 2052 - 0.300195
jcdE DDB_G0292770 DDB0232433 CDS2038164 1062 + 0.249529
kctd9 DDB_G0291330 highly similar to vertebrate potassium channel tetramerization domain-containing proteins contains four pentapeptide repeats and a doublecourtin domain enriched in gametesDDB0232433 CDS130125 1467 + 0.324472
kif10 DDB_G0293198 DDB0232433 CDS2654607 3717 - 0.262039
kxcB DDB_G0293124 kinase domain similar to those of stress-induced STK kinases contains a DH (Dbl homology) domain followed by a PH (pleckstrin homology) domain found in proteins shown to encode a GEF activity specific for Rho family membersDDB0232433 CDS2557594 3378 - 0.301066
ldpA DDB_G0291600 DDB0232433 CDS592384 1074 - 0.26257
lig4 DDB_G0292760 ATP-dependent DNA ligase contains the BRCT domain which is also found in BRCA1 forms a complex with XRCC4DDB0232433 CDS2052081 3267 + 0.270279
limD DDB_G0291251 DDB0232433 CDS31751 2103 - 0.38136
lpd DDB_G0291648 common component of the three 2-oxoacid dehydrogenase complexes oxidizing pyruvate 2-oxoglutarate and the branched-chain 2-oxo acids and of the glycine cleavage system complexDDB0232433 CDS70728 1467 - 0.387866
lst8 DDB_G0292592 component of the TORC2 (Tor complex 2) with Tor Rip3 and PiaA that plays a role in regulation of adenylate cyclase (ACA) and protein kinase B (PKB) activation during aggregationDDB0232433 CDS1819608 915 - 0.338798
manA DDB_G0292206 DDB0232433 CDS1355092 3033 - 0.331355
manA_ps DDB_G0293896 putative pseudogene alpha-mannosidase family proteinDDB0232433 CDS3427824 981 + 0.196738
mcfA DDB_G0291312 belongs to the substrate carrier protein family involved in transport of molecules across the mitochondrial membrane contains at least three transmembrane domainsbrbr bCommunity annotation:b Overview of the DDB0232433 CDS114038 984 - 0.28252
mcfG DDB_G0293556 ortholog of slc25a20 involved in transport of carnitineacylcarnitine across the mitochondrial membranebrbr bCommunity annotation:b Overview of the DDB0232433 CDS3039817 903 - 0.346622
mcfN DDB_G0293646 ortholog of the human SLC25A3 and S. cerevisiae MIR1 which transports inorganic phosphate from the cytosol to the mitochondrion matrix brbr bCommunity annotation:b Overview of the DDB0232433 CDS3201771 897 + 0.396878
mcfP DDB_G0292034 ortholog of Grave disease carrier protein (slc25a16) belongs to the substrate carrier proteins that are involved in transport of molecules across the mitochondrial membrane may transport coenzyme A brbr bCommunity annotation:b Overview of the DDB0232433 CDS1058459 894 + 0.318792
mcfZ DDB_G0293874 belongs to the substrate carrier protein family involved in transport of molecules across the mitochondrial membrane expressed in pstAO cells and in upper and lower cups during culminationbrbr bCommunity annotation:b Overview of the DDB0232433 CDS3410167 906 + 0.36755
mcln DDB_G0291275 ortholog of mucolipin when defective causing mucolipidosis type IV putative Ca2 channel contains a potential Ca2-binding EF hand as a regulatory site and 6 putative transmembrane domainsDDB0232433 CDS41617 2472 + 0.259304
mcm5 DDB_G0292958 similar to MCM5 a component of the Mcm2-7 hexameric complex that binds chromatin as a part of the pre-replicative complexDDB0232433 CDS2121500 2274 - 0.329815
mdhB DDB_G0292600 catalyzes the reaction malate NAD oxaloacetate NADH contains a predicted mitochondrial transit peptideDDB0232433 CDS1826095 1047 + 0.39255
med14 DDB_G0291297 ortholog of the mediator of RNA polymerase II transcription subunit 14 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machineryDDB0232433 CDS72961 4263 + 0.26343
med15 DDB_G0293914 putative ortholog of the poorly conserved mediator of RNA polymerase II transcription subunit 15 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machineryDDB0232433 CDS3468362 2556 - 0.267214
med28 DDB_G0292324 ortholog of the mediator of RNA polymerase II transcription subunit 28 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machineryDDB0232433 CDS1483431 540 + 0.248148
med4 DDB_G0292608 ortholog of the mediator of RNA polymerase II transcription subunit 4 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machineryDDB0232433 CDS1833713 1032 + 0.297481
med8 DDB_G0293824 putative ortholog of the poorly conserved mediator of RNA polymerase II transcription subunit 8 the mediator complex functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machineryDDB0232433 CDS3346216 1575 + 0.31873
mfeA DDB_G0291247 DDB0232433 CDS383676 1326 - 0.390649
mhkA DDB_G0291231 myosin II heavy chain kinase is an atypical protein serinethreonine kinase in the Alpha kinase group phosphorylates the myosin II heavy chain and drives myosin II disassemblyDDB0232433 CDS65139 3441 + 0.334496
mhsp70 DDB_G0293298 DDB0232433 CDS2761673 1977 + 0.376834
mileS DDB_G0293030 catalyzes the reaction ATP L-isoleucine tRNAIle AMP diphosphate L-isoleucyl-tRNAIleDDB0232433 CDS2348091 3105 - 0.287601
mipA DDB_G0292812 conserved hypothetical Dictyostelium protein contains a predicted signal sequence and a C-terminal transmembrane domainDDB0232433 CDS2204194 4182 + 0.24988
mleuS DDB_G0291346 catalyzes the reaction ATP L-leucine tRNALeu AMP diphosphate L-leucyl-tRNALeuDDB0232433 CDS154547 2823 + 0.29791
mnd1 DDB_G0291750 DDB0232433 CDS686426 666 - 0.252252
mobB DDB_G0292758 similar to the Mob1 family of proteins which are of unknown function but interact with Mps1 and NDR kinases Dictyostelium MobB has been shown to bind NdrADDB0232433 CDS2055578 651 - 0.285714
mobC DDB_G0293706 similar to the Mob1 family of proteins which are of unknown function but interact with Mps1 and NDR kinasesDDB0232433 CDS3038260 651 - 0.264209
mre11 DDB_G0293546 similar to S. cerevisiae MRE11 involved in processing double-strand DNA breaks with Rad50 in other organisms Mre11 is part of a complex with Rad50 and Nbs1 no Nbs1 ortholog has been found in Dictyostelium DDB0232433 CDS3016431 2070 + 0.304348
mrkA DDB_G0292304 CAMKL family protein kinase similar to MARK kinases SNF1 kinases and AMPK kinases contains 1 kinase-associated (KA1) domain and 1 UBA domainDDB0232433 CDS1433748 3183 - 0.286836
mrpl53 DDB_G0292420 DDB0232433 CDS1579394 390 + 0.271795
mth DDB_G0293766 DDB0232433 CDS3300203 486 + 0.238683
mybA DDB_G0293900 DDB0232433 CDS3493719 3693 - 0.25589
mybN DDB_G0292782 contains three Myb DNA-binding domains at the C-terminus of the predicted protein similar to Dictyostelium mybB and mybCDDB0232433 CDS2022556 1734 - 0.266436
mybR DDB_G0292182 DDB0232433 CDS1172608 1185 + 0.269198
mybS DDB_G0293468 DDB0232433 CDS2922718 3639 - 0.261061
mybT DDB_G0292180 DDB0232433 CDS1164954 570 + 0.261404
myoM DDB_G0292262 unconventional myosin and guanyl-nucleotide exchange factor which acts on Rac1A Rac1B and human Rac1 but not on RacC and RacEDDB0232433 CDS1463619 5214 + 0.274262
naglu DDB_G0291998 catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides mutated in patients with mucopolysaccharidosis type IIIB (Sanfilippo syndrome type B) a lysosomal storage disorderDDB0232433 CDS982514 2397 - 0.358365
ncapD2 DDB_G0293984 component of the condensin I complex required for conversion of interphase chromatin into mitotic condensed chromosomesDDB0232433 CDS3563765 4212 - 0.243115
ncapH DDB_G0292066 component of the condensin I complex required for conversion of interphase chromatin into mitotic condensed chromosomesDDB0232433 CDS1141212 2637 + 0.264316
ncapH2 DDB_G0291894 component of the condensin II complex which is involved in physical rigidity of the chromatid axisDDB0232433 CDS900574 2769 - 0.27519
ndrJ DDB_G0292654 similar to class II ribonucleotide reductase a monomeric form of ribonucleotide reductase that uses ribonucletide triphosphates rather than diphosphates as substrates the only other eukaryote in which this enzyme is present is Euglena gracilisDDB0232433 CDS1906693 2277 + 0.312692
ndufab1 DDB_G0291866 similar to mitochondrial matrix acyl carrier protein and the animal NADH dehydrogenase (ubiquinone) 1 alphabeta subcomplex 1 which is the carrier of the growing fatty acid chain in fatty acid biosynthesis in mitochondriaDDB0232433 CDS849824 363 + 0.360882
nhe3 DDB_G0292830 DDB0232433 CDS2111344 2361 - 0.345616
nol10 DDB_G0292466 DDB0232433 CDS1681385 2100 - 0.300476
nol6 DDB_G0291438 putative U3 snoRNP protein ortholog of H. sapiens NOL6 and S. cerevisiae UTP22DDB0232433 CDS304287 3837 - 0.258796
nosA DDB_G0292264 DDB0232433 CDS1472850 3270 - 0.284404
nup98 DDB_G0291390 very similar to the mammalian Nup98 precurser that is processed into two peptides Nup96 and Nup98 through autoproteolysisDDB0232433 CDS239658 6162 + 0.341448
ogg1 DDB_G0292618 similar to E. coli MutM and OGG1 a bifunctional DNA glycosylase that contains an activity that excises 8-oxoguanine and other derivatives of guanine from DNA and a beta-lyase activity that nicks DNA 3' of the lesionDDB0232433 CDS1847428 1320 - 0.258333
omt11 DDB_G0293886 similar to plant and bacterial O-methyltransferases expressed in pstO cells during culminationDDB0232433 CDS3424368 996 + 0.247992
omt12 DDB_G0293888 highly similar to plant and bacterial O-methyltransferases expressed in pstA cellsDDB0232433 CDS3426309 1110 + 0.243243
orcE DDB_G0293214 DNA replication initiation is driven by a conserved six protein complex the origin recognition complex (ORC) has a role in both chromosomal replication and mating type transcriptional silencingDDB0232433 CDS2694152 1716 + 0.238928
osbL DDB_G0291562 DDB0232433 CDS499055 1209 - 0.261373
ost1 DDB_G0293224 subunit of the oligosaccharyltransferase complex which catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen ortholog of S. cerevisiae OST1 and human ribophorin I contains one C-terminal transmembrane domain and an N-terminal signal peptideDDB0232433 CDS2680686 1383 + 0.349241
pabpc1A DDB_G0293558 similar to mammalian PABPC1 involved in cytoplasmic regulatory processes of mRNA metabolism binding the poly(A) tail of mRNADDB0232433 CDS3041877 1698 + 0.415783
pakE DDB_G0293932 putative protein serinethreonine kinase belongs to the PAKL subfamily of protein kinases the kinase domain is similar to mammalian STK3 and STK4 (MST) kinases and other STE20-like kinases stress-responsive kinaseDDB0232433 CDS3512665 2781 + 0.270766
pcp DDB_G0293196 belongs to the paracaspase family of caspase-like cysteine proteases unlike its mammalian orthologs the Dictyostelium protein does not have an effect on apoptosis associates with the contractile vacuole membrane GFP-Pcp overexpressing cells are susceptible to osmotic stressDDB0232433 CDS2705921 1221 - 0.284193
pdhA DDB_G0292994 catalyzes the reaction lipoamide pyruvate S-acetyldihydrolipoamide COsub2sub E1 alpha component of pyruvate dehydrogenase complex which contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1 phdA DDB0232433 CDS2563001 1134 - 0.368607
pdi2 DDB_G0291434 DDB0232433 CDS299936 1542 - 0.33463
pefB DDB_G0293530 similar to mammalian apoptosis component ALG-2 contains 5 EF-hand calcium binding domainsDDB0232433 CDS2988655 618 + 0.331715
pex13 DDB_G0292870 putative peroxin 13 ortholog a component of the peroxisomal translocation machinery with peroxin 14 and peroxin 17 mutations in human homolog cause a variety of peroxisomal disordersDDB0232433 CDS2185175 1713 - 0.348511
pex14 DDB_G0293264 putative ortholog of peroxin 14 component of the peroxisomal protein import machinery mutations in human homolog cause peroxisomal disordersDDB0232433 CDS2607099 2247 + 0.282154
pex6 DDB_G0292788 ortholog of peroxin 6 required for peroxisome biogenesis mutations in human homolog cause a variety of peroxisomal disordersDDB0232433 CDS2034271 3606 - 0.22518
pgl DDB_G0292898 catalyzes the reaction 6-phospho-D-glucono-15-lactone Hsub2subO 6-phospho-D-gluconateDDB0232433 CDS2232140 711 + 0.295359
phdG DDB_G0292622 DDB0232433 CDS1851269 1767 + 0.301075
phlp1 DDB_G0292850 DDB0232433 CDS2267210 951 + 0.283912
phlp3 DDB_G0293848 DDB0232433 CDS3411418 555 - 0.257658
pigL DDB_G0293136 DDB0232433 CDS2582359 777 + 0.245817
pigT DDB_G0291490 DDB0232433 CDS421140 2034 - 0.274828
pitD DDB_G0292426 DDB0232433 CDS1595140 996 - 0.282129
pks40 DDB_G0291614 DDB0232433 CDS536394 7659 - 0.244288
pks41 DDB_G0291684 DDB0232433 CDS545874 7629 - 0.244593
pks42 DDB_G0292544 DDB0232433 CDS1717075 7968 + 0.244603
pks43_ps DDB_G0292488 putative pseudogene beta-ketoacyl synthase family proteinDDB0232433 CDS1725966 7494 + 0.241793
pks44 DDB_G0293902 DDB0232433 CDS3438259 9237 + 0.251922
pks45 DDB_G0293912 DDB0232433 CDS3449815 9279 - 0.250781
plc DDB_G0292736 catalyzes the reaction 1-phosphatidyl-1D-myo-inositol 45-bisphosphate H2O D-myo-inositol 145-trisphosphate diacylglycero regulated by the MADS-box transcription factor SrfA during developmentDDB0232433 CDS2060204 2406 + 0.320864
pncA DDB_G0293618 catalyzes the reaction nicotinamide Hsub2subO nicotinate NHsub3subDDB0232433 CDS3150071 630 - 0.253968
ponA DDB_G0293522 DDB0232433 CDS3188338 432 + 0.326389
ponE DDB_G0293634 similar to ponticulin (ponA) a protein that anchors the actin cytoskeleton to the plasma membraneDDB0232433 CDS3189105 516 + 0.263566
pop1 DDB_G0291320 DDB0232433 CDS120925 2448 - 0.275735
pop5 DDB_G0291662 DDB0232433 CDS281774 516 - 0.24031
ppil3 DDB_G0291734 DDB0232433 CDS672553 486 - 0.281893
ppk1 DDB_G0293524 similar to bacterial PPK (PPK1 family) which synthesizes poly P a polymer of up to hundreds of phosphate residuesDDB0232433 CDS3029753 3162 - 0.328906
ppt3 DDB_G0292862 similar to mammalian PPT1 an enzyme which catalyzes the reaction: palmitoyl-protein Hsub2subO palmitate protein third palmitoyl-protein thioesterase in DictyosteliumDDB0232433 CDS2173470 870 - 0.310345
prmt1 DDB_G0291556 DDB0232433 CDS504463 1026 - 0.287524
psenA DDB_G0291352 putative catalytic subunit of the gamma-secretase complex similar to presenilin 2 a gene that has been associated with early-onset familial Alzheimer's diseaseDDB0232433 CDS166985 1869 + 0.240235
psenB DDB_G0292310 putative catalytic component of the gamma-secretase complex similar to presenilin 2 a gene that has been associated with early-onset familial Alzheimer's diseaseDDB0232433 CDS1442668 1422 - 0.287623
psenen DDB_G0293484 component of the gamma-secretase complex which executes the intramembrane proteolysis of type I integral membrane proteins such as NotchDDB0232433 CDS2946443 210 - 0.266667
psiA DDB_G0291982 DDB0232433 CDS1023224 1674 - 0.310633
psiK DDB_G0292014 DDB0232433 CDS1018381 2187 - 0.328304
psiN DDB_G0292912 contains a PA14 (anthrax protection antigen) domain and 7 Dictyostelium (CTDC) repeats expressed in pstAO cells and in upper cup during culminationDDB0232433 CDS2264405 2241 + 0.33378
psiQ DDB_G0293288 similar to dicA1 an extracellular signaling molecule and ecmB an extracellular matrix protein contains a signal peptide a PA14 (anthrax protection antigen) domain and 14 Dictyostelium (CTDC) repeats significantly longer than other family membersDDB0232433 CDS2665567 2958 - 0.320825
psiR DDB_G0293286 similar to dicA1 an extracellular signaling molecule and ecmB an extracellular matrix protein expressed in prespore cellsDDB0232433 CDS2670579 2991 - 0.337011
psmA2 DDB_G0292122 subunit of an endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232433 CDS1227398 699 + 0.317597
psmB5 DDB_G0293784 subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232433 CDS3275662 819 - 0.328449
psmC5 DDB_G0292382 ATPase subunit and regulatory subcomplex of the 26S proteasome developmentally regulated TAT binding protein homologDDB0232433 CDS1673522 1212 - 0.334158
psmD2 DDB_G0293752 DDB0232433 CDS3279468 2682 + 0.346383
psmE4 DDB_G0292398 activator subunit of the 20S proteasome (macropain) the endopeptidase complex involved in an ATPubiquitin-dependent nonlysosomal proteolytic pathway in eukaryotes composed of up to 28 subunits which form a highly ordered ring-shaped structure (20S ring)DDB0232433 CDS1544203 5718 - 0.26128
ptcA DDB_G0293882 DDB0232433 CDS3419922 1518 + 0.216733
ptcL DDB_G0291794 DDB0232433 CDS753746 3351 + 0.223217
pter DDB_G0293394 DDB0232433 CDS2831683 1113 - 0.277628
qpct DDB_G0293986 catalyzes the reaction L-glutaminyl-peptide 5-oxoprolyl-peptide NHsub3sub during the biosynthesis of pyroglutamyl peptidesDDB0232433 CDS3571398 1083 + 0.228994
qpct_ps DDB_G0293952 putative pseudogene similar to glutaminyl-peptide cyclotransferase qpct DDB0232433 CDS3568849 603 + 0.223881
qtrt1 DDB_G0291802 catalyzes the reaction [tRNA]-guanine queuine [tRNA]-queuine guanineDDB0232433 CDS770747 1344 - 0.385417
r59 DDB_G0295633 predicted class I RNA a small non-coding RNA (55-65 nt) containing highly conserved 5' and 3' endsDDB0232433 CDS2295180 62 + 0.290323
r60 DDB_G0295635 predicted class I RNA a small non-coding RNA (55-65 nt) containing highly conserved 5' and 3' endsDDB0232433 CDS2298172 59 + 0.288136
r61 DDB_G0295637 predicted class I RNA a small non-coding RNA (55-65 nt) containing highly conserved 5' and 3' endsDDB0232433 CDS2298272 66 + 0.318182
r62 DDB_G0295639 predicted class I RNA a small non-coding RNA (55-65 nt) containing highly conserved 5' and 3' endsDDB0232433 CDS3354232 43 + 0.395349
rab2A DDB_G0292268 DDB0232433 CDS1422661 624 + 0.310897
rab4 DDB_G0292406 DDB0232433 CDS1558648 618 + 0.302589
rabA DDB_G0291233 DDB0232433 CDS312209 606 - 0.268977
rabG1 DDB_G0291738 DDB0232433 CDS677353 591 + 0.323181
rabU DDB_G0291293 DDB0232433 CDS69908 585 + 0.268376
racC DDB_G0293526 DDB0232433 CDS3000314 579 + 0.322971
racD DDB_G0291976 DDB0232433 CDS1210911 765 + 0.32549
racJ DDB_G0292560 DDB0232433 CDS1884330 618 + 0.263754
racL DDB_G0292816 DDB0232433 CDS2181555 591 + 0.279188
rad17 DDB_G0292504 similar to S. pombe and H. sapiens RAD17 and S. cerevisiae RAD24 component of Rad17-RFC complex which loads the 9-1-1 (Rad9-Rad1-Hus1) complex onto damaged DNADDB0232433 CDS1748396 3576 + 0.245526
rad50 DDB_G0292786 similar to S. cerevisiae RAD50 involved in processing double-strand DNA breaks with Mre11 in other organisms Rad50 is part of a complex with Mre11 and Nbs1 no Nbs1 ortholog has been found in Dictyostelium DDB0232433 CDS2029933 4056 + 0.272189
ranA DDB_G0291235 DDB0232433 CDS78789 639 + 0.363067
rapA DDB_G0291237 DDB0232433 CDS98914 561 + 0.354724
rasB DDB_G0292998 nuclear Ras that may have a role in cell division andor nuclear division expressed throughout growth and developmentDDB0232433 CDS2415988 594 - 0.3367
rasD DDB_G0292996 DDB0232433 CDS2530991 564 - 0.294326
rasG DDB_G0293434 maximally expressed during growth activated by rasGEF GefRbr bCommunity annotation:b Gene expression is greatly perturbed in vegetative rasC-rasG- double null mutants and in early development a subset of important signalling genes are not induced adequately. Notable among these early genes are acaA dagA erkA erkB gpaB and csbA. The discoidin I genes are also underexpresed. The expression of most of these genes (not the discoidins) is rescued when carA is overexpressed in the double null line. Most remarkably the overall profile of gene expression changes in vegetative double null mutants compared to the parent strain is highly similar to that of wild-type cells six hours after infection with Legionella pneumophila compared to uninfected cells (correlation coefficient 0.61) (Li et al 2009) making this strain partially phenocopy the Legionella-resistant dupA mutant (in terms of gene expression changes correlation coefficient 0.49). Of 55 genes overexpressed at least 4-fold in the vegetDDB0232433 CDS2877682 570 - 0.368421
redA DDB_G0293904 catalyzes the reaction NADPH n oxidized hemoprotein NADP() n reduced hemoprotein involved in the metabolism of compounds that control Dictyostelium cell differentiationDDB0232433 CDS3580985 1896 - 0.339135
rer1 DDB_G0292588 conserved protein involved in the retrieval of some endoplasmic reticulum membrane proteins from the early golgi compartment contains 3 predicted transmembrane domainsDDB0232433 CDS1815723 567 - 0.292769
rexo1 DDB_G0291590 similar to S. cerevisiae REX1 or RNH70 a 3'-5' RNA exonucleaseDDB0232433 CDS580025 2085 + 0.251799
rfc2 DDB_G0291868 ortholog of H. sapiens RFC2 (40 kDa subunit) and S. cerevisiae RFC2DDB0232433 CDS850606 1017 + 0.328417
rfc3 DDB_G0293702 ortholog of H. sapiens RFC3 (38 kDa subunit) and S. cerevisiae RFC5DDB0232433 CDS3014705 1044 - 0.331418
ric8 DDB_G0292036 similar to human RIC8A (synembryn-A) non-receptor guanine nucleotide exchange factor for GDDB0232433 CDS1059972 1314 - 0.307458
rnaseh2A DDB_G0292584 catalytic subunit of RNase HII an endonuclease that specifically degrades the RNA of RNA:DNA hybrids defects in H. sapiens RNASEH2A cause Aicardi-Goutieres syndrome type 4 a genetically heterogeneous autosomal recessive encephalopathyDDB0232433 CDS1802425 870 - 0.287356
roco10 DDB_G0291710 member of the TKL (tyrosine kinase-like) group and the ROCO family of protein kinases contains RhoGAP LRR Roc COR RGS (regulator of G-protein signaling) Kelch repeats and protein kinase domainsDDB0232433 CDS648952 7941 - 0.290769
rpa2 DDB_G0293560 component of the RNA polymerase I complex ortholog of S. cerevisiae RPA135DDB0232433 CDS3044865 3393 - 0.328912
rpb3 DDB_G0292244 component of the RNA polymerase II complex ortholog of S. cerevisiae RPB3DDB0232433 CDS1368967 909 + 0.29703
rpb5 DDB_G0291636 subunit common to RNA polymerases I II and III ortholog of S. cerevisiae RPB5DDB0232433 CDS457932 546 - 0.302198
rpc19 DDB_G0291362 subunit common to RNA polymerases I and III ortholog of S. cerevisiae RPC19DDB0232433 CDS182518 351 + 0.290598
rpl13 DDB_G0291870 DDB0232433 CDS852689 630 + 0.420635
rpl23a DDB_G0293502 DDB0232433 CDS2967908 510 + 0.4
rpl27a DDB_G0292388 DDB0232433 CDS1592145 447 - 0.411633
rpl3 DDB_G0291862 protein component of the large (60S) ribosomal subunit ribosomal protein L3 homologDDB0232433 CDS954736 1197 - 0.404344
rpl6 DDB_G0292460 protein component of the large (60S) ribosomal subunit ribosomal protein L6 homologDDB0232433 CDS1676096 711 + 0.410689
rps14 DDB_G0291526 protein component of the small (40S) ribosomal subunit ribosomal protein S14 homologDDB0232433 CDS481211 459 - 0.444444
rps2 DDB_G0293742 protein component of the small (40S) ribosomal subunit expressed in vegetative cells and in prestalk cells during culminationDDB0232433 CDS3277669 798 + 0.45614
rps21 DDB_G0293700 protein component of the small (40S) ribosomal subunit ribosomal protein S21 homologDDB0232433 CDS3013335 237 - 0.443038
rps3 DDB_G0293000 DDB0232433 CDS2556040 657 - 0.418569
rps8 DDB_G0291864 DDB0232433 CDS844628 636 + 0.418239
rrpB DDB_G0291249 one of the three D. discoideum RNA-directed RNA polymerases for which a distinct function has not yet been identifiedDDB0232433 CDS442657 7212 - 0.266916
rsmD DDB_G0292318 DDB0232433 CDS1471614 684 + 0.19152
rsmM DDB_G0292300 DDB0232433 CDS1426160 645 + 0.308527
rtnlc DDB_G0293088 DDB0232433 CDS2461261 951 - 0.335436
rvb1 DDB_G0293226 similar to S. cerevisiae RVB1 a component of chromatin remodeling complexesDDB0232433 CDS2678243 1572 - 0.357506
sec13 DDB_G0292052 DDB0232433 CDS1099513 906 + 0.34106
serB DDB_G0291368 catalyzes the reaction 3-phospho-serine Hsub2subO L-serine phosphateDDB0232433 CDS185417 1098 + 0.26776
sf1 DDB_G0293554 ortholog of the conserved splicing factor 1 binds to the intron branch point sequence (BPS) of the pre-mRNA necessary for the ATP-dependent first step of spliceosome assemblyDDB0232433 CDS3035802 1506 + 0.308101
sf3a2 DDB_G0293876 DDB0232433 CDS3412404 648 + 0.274691
sgmB DDB_G0293210 DDB0232433 CDS2708230 1914 + 0.306165
shmt2 DDB_G0291652 mitochondrial serine hydroxymethyltransferase catalyzes the reaction L-serine tetrahydrofolate L-glycine 510-methylene-tetrahydrofolate Hsub2subODDB0232433 CDS91358 1446 - 0.350622
sigB DDB_G0293364 DDB0232433 CDS2822106 2049 + 0.307467
smc1 DDB_G0291752 functions in chromosome dynamics heterodimerizes with smc3DDB0232433 CDS688164 4122 + 0.312712
smp3 DDB_G0291660 CAZy family GT76 catalyzes the addition of the fourth mannose to GPI (glycosylphosphatidylinositol)DDB0232433 CDS189530 2004 + 0.211577
spg1 DDB_G0291269 DDB0232433 CDS37774 612 + 0.338235
sptB DDB_G0291283 similar to S. cerevisiae LCB2 dimerizes with SptA to catalyze the conversion of palmitoyl-CoA L-serine into CoA 3-dehydro-D-sphinganine COsub2subDDB0232433 CDS51803 1473 + 0.35981
sqle DDB_G0293584 catalyzes the reaction squalene AH2 O2 (S)-squalene-23-epoxide A H2O catalyzes the first oxygenation step in sterol biosynthesisDDB0232433 CDS3076225 1509 + 0.307488
sqrdl DDB_G0292250 ortholog of the conserved sulfide quinone reductase-like protein in S. pombe this oxidoreductase is involved in mitochondrial sulfide oxidationDDB0232433 CDS1300465 1359 - 0.341428
srp72 DDB_G0291412 component of the signal recognition particle (SRP) which ensures correct targeting of nascent secretory proteins to the endoplasmic reticulumDDB0232433 CDS275731 2019 - 0.270926
st15 DDB_G0292218 similar to beta-14-endoglucanase expressed in pstO cells expression is decreased in DDB0232433 CDS1328404 369 + 0.333333
sti1 DDB_G0292404 DDB0232433 CDS1556012 1695 - 0.362242
symA DDB_G0292814 DDB0232433 CDS2158906 1371 - 0.33698
tRNA-Ala-AGC-11 DDB_G0295361 transfers an alanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3132339 73 + 0.534247
tRNA-Ala-AGC-12 DDB_G0295415 transfers an alanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2625762 73 - 0.534247
tRNA-Ala-AGC-13 DDB_G0295419 transfers an alanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2624351 73 - 0.534247
tRNA-Ala-AGC-14 DDB_G0295425 transfers an alanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2479676 73 - 0.534247
tRNA-Ala-AGC-15 DDB_G0295449 transfers an alanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1529428 73 - 0.534247
tRNA-Arg-CCU-1 DDB_G0295385 transfers an arginine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3587001 74 - 0.486486
tRNA-Asn-GUU-16 DDB_G0295317 transfers an asparagine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1833377 73 + 0.60274
tRNA-Asn-GUU-17 DDB_G0295369 transfers an asparagine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3182148 73 + 0.60274
tRNA-Asn-GUU-18 DDB_G0295371 transfers an asparagine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3235027 73 + 0.60274
tRNA-Asn-GUU-19 DDB_G0295441 transfers an asparagine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1801506 73 - 0.60274
tRNA-Asp-GUC-21 DDB_G0295345 transfers an aspartic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2777486 72 + 0.569444
tRNA-Asp-GUC-22 DDB_G0295401 transfers an aspartic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3008610 72 - 0.569444
tRNA-Cys-GCA-7 DDB_G0295333 transfers a cysteine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2258615 72 + 0.5
tRNA-Cys-GCA-8 DDB_G0295447 transfers a cysteine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1664089 72 - 0.5
tRNA-Gln-UUG-13 DDB_G0295309 transfers a glutamine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1453608 73 + 0.410959
tRNA-Gln-UUG-14 DDB_G0295335 transfers a glutamine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2286132 73 + 0.410959
tRNA-Glu-CUC-2 DDB_G0295339 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2365116 72 + 0.555556
tRNA-Glu-CUC-3 DDB_G0295427 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2478517 72 - 0.555556
tRNA-Glu-UUC-15 DDB_G0295299 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS323423 72 + 0.513889
tRNA-Glu-UUC-16 DDB_G0295329 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2120506 72 + 0.513889
tRNA-Glu-UUC-17 DDB_G0295357 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3053148 72 + 0.513889
tRNA-Glu-UUC-18 DDB_G0295395 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3291634 72 - 0.513889
tRNA-Glu-UUC-19 DDB_G0295399 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3069439 72 - 0.513889
tRNA-Glu-UUC-20 DDB_G0295413 transfers a glutamic acid residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2730062 72 - 0.513889
tRNA-Gly-GCC-14 DDB_G0295303 DDB0232433 CDS859158 71 + 0.549296
tRNA-Gly-GCC-15 DDB_G0295319 DDB0232433 CDS1836361 71 + 0.549296
tRNA-Gly-GCC-16 DDB_G0295323 DDB0232433 CDS1912886 71 + 0.549296
tRNA-Gly-GCC-17 DDB_G0295433 DDB0232433 CDS1927240 71 - 0.549296
tRNA-Gly-GCC-18 DDB_G0295439 DDB0232433 CDS1837565 71 - 0.549296
tRNA-His-GUG-10 DDB_G0295437 transfers a histidine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1837996 71 - 0.521127
tRNA-His-GUG-8 DDB_G0295353 transfers a histidine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2840392 71 + 0.521127
tRNA-His-GUG-9 DDB_G0295367 transfers a histidine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3173627 71 + 0.521127
tRNA-Ile-AAU-12 DDB_G0295307 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1374085 73 + 0.589041
tRNA-Ile-AAU-13 DDB_G0295347 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2784596 73 + 0.589041
tRNA-Ile-AAU-14 DDB_G0295363 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3133759 73 + 0.589041
tRNA-Ile-AAU-15 DDB_G0295381 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3534943 73 + 0.589041
tRNA-Ile-AAU-16 DDB_G0295407 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2936034 73 - 0.589041
tRNA-Ile-AAU-17 DDB_G0295465 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1013913 73 - 0.589041
tRNA-Ile-UAU-1 DDB_G0295373 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3312699 91 + 0.428571
tRNA-Ile-UAU-2 DDB_G0295393 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3299859 91 - 0.428571
tRNA-Ile-UAU-3 DDB_G0295409 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2771961 91 - 0.43956
tRNA-Ile-UAU-4 DDB_G0295411 transfers an isoleucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2770337 91 - 0.43956
tRNA-Leu-AAG-10 DDB_G0295349 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2836863 82 + 0.463415
tRNA-Leu-AAG-11 DDB_G0295391 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3407225 82 - 0.463415
tRNA-Leu-AAG-8 DDB_G0295325 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2082530 82 + 0.451219
tRNA-Leu-AAG-9 DDB_G0295341 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2728442 82 + 0.463415
tRNA-Leu-CAA-4 DDB_G0295471 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS310825 81 - 0.45679
tRNA-Leu-UAA-13 DDB_G0295313 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1776201 83 + 0.481928
tRNA-Leu-UAA-14 DDB_G0295387 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3448553 83 - 0.481928
tRNA-Leu-UAA-15 DDB_G0295389 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3431954 83 - 0.481928
tRNA-Leu-UAA-16 DDB_G0295417 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2624493 83 - 0.481928
tRNA-Leu-UAA-17 DDB_G0295435 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1870453 83 - 0.481928
tRNA-Leu-UAA-18 DDB_G0295463 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1044809 83 - 0.481928
tRNA-Leu-UAG-3 DDB_G0295469 transfers a leucine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS604764 80 - 0.5
tRNA-Lys-CUU-10 DDB_G0295405 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2954533 73 - 0.671233
tRNA-Lys-CUU-8 DDB_G0295355 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2985396 73 + 0.671233
tRNA-Lys-CUU-9 DDB_G0295403 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2956996 73 - 0.671233
tRNA-Lys-UUU-20 DDB_G0295315 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1794634 73 + 0.616438
tRNA-Lys-UUU-21 DDB_G0295365 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3141444 73 + 0.616438
tRNA-Lys-UUU-22 DDB_G0295397 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3137397 73 - 0.616438
tRNA-Lys-UUU-23 DDB_G0295445 transfers a lysine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1703275 73 - 0.616438
tRNA-Met-CAU-16 DDB_G0295351 transfers a methionine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2840202 73 + 0.493151
tRNA-Met-CAU-17 DDB_G0295431 transfers a methionine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1948217 72 - 0.513889
tRNA-Phe-GAA-14 DDB_G0295377 transfers a phenylalanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3387585 74 + 0.554054
tRNA-Phe-GAA-15 DDB_G0295383 transfers a phenylalanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3574106 74 + 0.540541
tRNA-Phe-GAA-16 DDB_G0295467 transfers a phenylalanine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS898266 74 - 0.554054
tRNA-Pro-AGG-1 DDB_G0295321 transfers a proline residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1869424 71 + 0.422535
tRNA-Pro-UGG-15 DDB_G0295453 transfers a proline residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1299996 71 - 0.492958
tRNA-Pro-UGG-16 DDB_G0295455 transfers a proline residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1250562 71 - 0.492958
tRNA-Ser-AGA-9 DDB_G0295337 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2340655 82 + 0.548781
tRNA-Ser-GCU-12 DDB_G0295429 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2347717 81 - 0.592593
tRNA-Ser-UGA-10 DDB_G0295311 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1758891 82 + 0.52439
tRNA-Ser-UGA-11 DDB_G0295375 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3325552 82 + 0.52439
tRNA-Ser-UGA-12 DDB_G0295443 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1761326 82 - 0.52439
tRNA-Ser-UGA-13 DDB_G0295457 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1133095 82 - 0.52439
tRNA-Ser-UGA-14 DDB_G0295459 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1129630 82 - 0.52439
tRNA-Ser-UGA-15 DDB_G0295461 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1097223 82 - 0.52439
tRNA-Ser-UGA-9 DDB_G0295305 transfers a serine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1124940 82 + 0.52439
tRNA-Thr-AGU-18 DDB_G0295421 transfers a threonine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2598517 72 - 0.5
tRNA-Tyr-GUA-10 DDB_G0295331 transfers a tyrosine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2176055 83 + 0.493976
tRNA-Tyr-GUA-11 DDB_G0295359 transfers a tyrosine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3068583 83 + 0.506024
tRNA-Tyr-GUA-12 DDB_G0295379 transfers a tyrosine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS3430565 82 + 0.5
tRNA-Tyr-GUA-13 DDB_G0295423 transfers a tyrosine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2597197 83 - 0.493976
tRNA-Tyr-GUA-9 DDB_G0295327 transfers a tyrosine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2088994 83 + 0.493976
tRNA-Val-AAC-20 DDB_G0295301 transfers a valine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS586137 74 + 0.486486
tRNA-Val-AAC-21 DDB_G0295451 transfers a valine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS1321993 74 - 0.486486
tRNA-Val-UAC-7 DDB_G0295343 transfers a valine residue to a growing polypeptide chain during protein synthesisDDB0232433 CDS2768404 74 + 0.540541
tacA DDB_G0291342 transcription factor regulated by calcineurin to localize from the cytosol to the nucleus where it might be phosphorylated by GskA involved in stalk cell differentiation and the stress response to lithiumDDB0232433 CDS140829 2433 + 0.286478
taf1 DDB_G0292242 ortholog of H. sapiens and S. cerevisiae TAF1 an atypical TAF1 family protein kinase and contains a bromodomain putative HAF group protein (histone acetyltransferase)DDB0232433 CDS1360709 6933 - 0.301457
taf13 DDB_G0292838 DDB0232433 CDS2136060 321 - 0.267913
taf2 DDB_G0292724 TFIID subunit involved in RNA polymerase II transcription initiation ortholog of H. sapiens and S. cerevisiae TAF2DDB0232433 CDS1853349 6135 - 0.292258
tagA DDB_G0293002 amino terminus has a serine protease domain carboxyl terminus consists of a half-transporter of the ABCB familyDDB0232433 CDS2501320 5259 + 0.296254
taz DDB_G0291922 ortholog of S. cerevisiae TAZ1 and H. sapiens tafazzin implicated in Barth syndromeDDB0232433 CDS950884 858 + 0.270396
tert DDB_G0293918 DDB0232433 CDS3475961 3813 - 0.190401
tgrA1 DDB_G0291622 contains a putative signal peptide and a C-terminal transmembrane domain in a cluster of recently duplicated genes and almost identical to DDB0232433 CDS344609 2541 + 0.243998
tgrA2 DDB_G0291666 in a cluster of recently duplicated genes and almost identical to DDB0232433 CDS352396 2535 + 0.242209
tgrA3 DDB_G0291668 contains a predicted signal peptide and an additional transmembrane domain in a cluster of recently duplicated genes and very similar to DDB0232433 CDS359944 3264 + 0.254289
tgrA4 DDB_G0291514 contains a putative signal peptide and one additional transmembrane domain almost identical to DDB0232433 CDS462725 3117 - 0.256015
tgrA_ps1 DDB_G0291624 putative pseudogene immunoglobulin E-set family geneDDB0232433 CDS356398 2589 + 0.248358
tgrA_ps2 DDB_G0291460 putative pseudogene immunoglobulin E-set family geneDDB0232433 CDS348356 2541 + 0.241244
tgrA_ps3 DDB_G0291500 putative pseudogene immunoglobulin E-set family geneDDB0232433 CDS440410 1200 + 0.253333
tgrA_ps7 DDB_G0291458 putative pseudogene fragment of immunoglobulin E-set family genes including DDB0232433 CDS342766 417 + 0.213429
tgrC4 DDB_G0291454 DDB0232433 CDS333292 2685 - 0.279702
tgrC_ps3 DDB_G0293238 putative pseudogene immunoglobulin E-set family geneDDB0232433 CDS2646511 258 + 0.267442
tgrF1 DDB_G0292732 DDB0232433 CDS2005101 2754 - 0.245461
tgrG1 DDB_G0292772 DDB0232433 CDS2009912 2928 + 0.239413
tgrQ1 DDB_G0292562 DDB0232433 CDS1885258 2016 - 0.244048
thg1 DDB_G0291830 conserved eukaryotic protein that has been shown in S. cerevisiae to be an essential tRNAHis guanylyltransferase that adds a guanosine residue to the 5' end of tRNAHis after transcription and RNase P cleavage conserved domain also known as DUF549 domainDDB0232433 CDS833386 771 + 0.265888
tkrA DDB_G0292104 catalyzes the reaction D-gluconate NADPsupsup 2-dehydro-D-gluconate NADPH HsupsupDDB0232433 CDS1190069 1005 + 0.300498
tmem184D DDB_G0291287 TMEM184 family protein contains 7 predicted transmembrane domainsDDB0232433 CDS57345 1494 + 0.261714
tmem20 DDB_G0292606 putative drugmetabolite transporter containing 10 predicted transmembrane domainsDDB0232433 CDS1830985 2097 + 0.311874
trappc2l DDB_G0292690 DDB0232433 CDS1953634 423 - 0.238771
triA DDB_G0292436 prespore-specific gene that regulates cell sorting and morphogenesis in mutants the spore mass is suspended halfway up the stalkbr bNomenclature note:b trishanku is the king in Hindu mythology who is suspended halfway between heaven and earth DDB0232433 CDS1620628 2094 - 0.309933
trxC DDB_G0294489 small disulphide-containing redox protein that serves as a general protein disulphide oxidoreductase up-regulated at 6 hr developmental stageDDB0232433 CDS2335005 315 - 0.32381
ttc27 DDB_G0293372 DDB0232433 CDS2801637 2562 - 0.296253
uba5 DDB_G0293306 DDB0232433 CDS2741328 1146 + 0.287086
ube2v DDB_G0292596 DDB0232433 CDS1823383 417 - 0.290168
ubpA DDB_G0291239 DDB0232433 CDS283328 2514 + 0.333731
ubqI DDB_G0291928 DDB0232433 CDS961035 918 + 0.308279
ubqN DDB_G0292984 DDB0232433 CDS2259430 222 - 0.247748
ubqO DDB_G0292908 DDB0232433 CDS2261064 234 - 0.311966
ubq_ps DDB_G0292910 putative pseudogene fragment similar to D. discoideum ubiquitin genes including DDB0232433 CDS2262456 144 - 0.326389
ubr7 DDB_G0292022 DDB0232433 CDS1035856 1398 - 0.253934
ufm1 DDB_G0295709 DDB0232433 CDS620919 258 + 0.302326
vatM DDB_G0291858 ortholog of the mammalian V-type proton ATPase 116 kDa subunit a the transmembrane subunit of the vacuolar ATP synthase that generates an acidic environment in several intracellular compartments V-ATPases consist of peripheral (V1) and membrane integral (V0) heteromultimeric complexes this protein is part of the V0 complexDDB0232433 CDS889796 2454 + 0.368786
vps26l DDB_G0292212 ortholog of H. sapiens DSCR3 the Down syndrome critical region gene 3DDB0232433 CDS1334023 915 + 0.288525
vps2B DDB_G0292400 putative ortholog of human CHMP2A (Chromatin Modifying Protein 2A) and yeast DID4 (Doa4-Independent Degradation) component of the ESCRT-III complex (endosomal sorting complex required for transport)DDB0232433 CDS1551408 597 - 0.296482
vps35 DDB_G0293218 ortholog of VPS35 a subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde transportDDB0232433 CDS2686279 2346 + 0.323529
vps52A DDB_G0293772 putative ortholog of S. cerevisiae VPS52 component of the GARP (Golgi-associated retrograde protein) complexDDB0232433 CDS3307775 2517 + 0.222487
vps52B DDB_G0293496 similar to S. cerevisiae VPS52 component of the GARP (Golgi-associated retrograde protein) complexDDB0232433 CDS2961150 2631 - 0.247815
vps8 DDB_G0291606 putative ortholog of VPS8 involved in vacuolar protein localizationDDB0232433 CDS397697 5256 + 0.296233
vti1A DDB_G0292974 DDB0232433 CDS2202494 654 - 0.281346
wasA DDB_G0293834 colocalizes with clathrin spots suggesting involvement in endocytosis does not localize to pseudopods in wild type in SCAR depleted mutants WASP replaces the functions of SCAR and localizes to pseudopodsDDB0232433 CDS3376698 1200 + 0.4025
wbp1 DDB_G0291780 subunit of the oligosaccharyltransferase complex which catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen ortholog of S. cerevisiae WBP1 and human OST48 contains one C-terminal transmembrane domain and an N-terminal signal peptideDDB0232433 CDS737175 1281 + 0.297424
wdr13 DDB_G0291596 DDB0232433 CDS588031 1464 + 0.268443
wdr23 DDB_G0291832 DDB0232433 CDS834929 1986 - 0.291541
wdr53 DDB_G0293608 DDB0232433 CDS3130386 1107 + 0.226739
wdr92 DDB_G0291822 DDB0232433 CDS825936 1074 + 0.255121
wshA DDB_G0292878 contains a C-terminal actin-binding WH2 (Wiskott Aldrich syndrome homology region 2) domainDDB0232433 CDS2194668 1419 + 0.349542
xacA DDB_G0291978 contains a RhoGAP domain an SH3 domain and two RhoGEF domains separated by a PH domainDDB0232433 CDS988440 4053 + 0.304713
xpc DDB_G0292296 DDB0232433 CDS1414792 2904 + 0.266529
xpo1 DDB_G0291306 DDB0232433 CDS102439 3174 - 0.3431
xpo2 DDB_G0291838 bCommunity annotation:b DDB_G0291838 is highly similar to cse1 of budding yeast and CAS of metazoans. In yeast this protein has been shown to be essential for the re-export of importin alpha (see Schroeder et al Mol Gen Genet 261 788-795 (1999). CSE stands for DDB0232433 CDS815672 2856 - 0.308473
xpo6 DDB_G0293076 DDB0232433 CDS2441945 3144 + 0.265585
xpo7 DDB_G0291986 DDB0232433 CDS1213027 3024 + 0.263228
ykt6 DDB_G0291656 DDB0232433 CDS180176 609 + 0.320197
zizB DDB_G0293084 DDB0232433 CDS2452128 6444 - 0.301055