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2024-05-19 18:09:00

Gene list

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Genomic element: DPPA0090b03.f1-3_x_part2

Number of genes found: 125

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PPL_13714 tRNA-GlyDPPA0090b03.f1-3_x_part2 tRNA274499 71 - 0.56338
NA PPL_13715 tRNA-ValDPPA0090b03.f1-3_x_part2 tRNA347551 74 + 0.432432
fcsB PPL_01411 catalyzes the reaction ATP a long-chain carboxylic acid CoA AMP diphosphate an acyl-CoADPPA0090b03.f1-3_x_part2 CDS51097 2025 - 0.443951
g1190 PPL_01395 DPPA0090b03.f1-3_x_part2 CDS341 6987 + 0.351081
g1191 PPL_01398 DPPA0090b03.f1-3_x_part2 CDS10616 1560 - 0.414103
g1192 PPL_01399 DPPA0090b03.f1-3_x_part2 CDS12953 4380 + 0.4
g1193 PPL_01400 DPPA0090b03.f1-3_x_part2 CDS18179 4233 + 0.381999
g1194 PPL_12782 DPPA0090b03.f1-3_x_part2 CDS22799 1515 - 0.391419
g1195 PPL_01401 DPPA0090b03.f1-3_x_part2 CDS24896 1467 + 0.406271
g1196 PPL_01402 DPPA0090b03.f1-3_x_part2 CDS26704 1263 - 0.410135
g1197 PPL_01404 DPPA0090b03.f1-3_x_part2 CDS30040 1401 - 0.339044
g1198 PPL_12783 DPPA0090b03.f1-3_x_part2 CDS31847 1572 - 0.351145
g1199 PPL_01405 DPPA0090b03.f1-3_x_part2 CDS33993 1104 - 0.374094
g1200 PPL_12784 DPPA0090b03.f1-3_x_part2 CDS36786 2880 - 0.367014
g1201 PPL_12785 DPPA0090b03.f1-3_x_part2 CDS40032 2928 - 0.346995
g1202 PPL_01407 DPPA0090b03.f1-3_x_part2 CDS43371 1491 - 0.34004
g1203 PPL_01408 DPPA0090b03.f1-3_x_part2 CDS45410 1197 - 0.427736
g1204 PPL_01409 DPPA0090b03.f1-3_x_part2 CDS47958 810 - 0.407407
g1205 PPL_01410 DPPA0090b03.f1-3_x_part2 CDS49666 906 + 0.389625
g1207 PPL_01412 DPPA0090b03.f1-3_x_part2 CDS54596 1893 - 0.424194
g1208 PPL_01413 DPPA0090b03.f1-3_x_part2 CDS57968 2214 - 0.499548
g1209 PPL_01414 DPPA0090b03.f1-3_x_part2 CDS61898 906 - 0.418322
g1210 PPL_01415 DPPA0090b03.f1-3_x_part2 CDS64073 1332 - 0.430931
g1211 PPL_01416 DPPA0090b03.f1-3_x_part2 CDS66573 1083 + 0.323176
g1212 PPL_01417 DPPA0090b03.f1-3_x_part2 CDS70378 3870 + 0.459173
g1213 PPL_01418 DPPA0090b03.f1-3_x_part2 CDS74727 2559 - 0.368503
g1214 PPL_01420 DPPA0090b03.f1-3_x_part2 CDS78607 1404 + 0.358262
g1215 PPL_01421 DPPA0090b03.f1-3_x_part2 CDS80439 1704 + 0.370892
g1216 PPL_01422 DPPA0090b03.f1-3_x_part2 CDS82405 1761 - 0.386144
g1217 PPL_01423 DPPA0090b03.f1-3_x_part2 CDS84793 567 - 0.42328
g1218 PPL_01424 DPPA0090b03.f1-3_x_part2 CDS85804 1569 - 0.409178
g1219 PPL_01425 DPPA0090b03.f1-3_x_part2 CDS90029 1272 + 0.296384
g1220 PPL_01427 functions in nuclear protein import via a substrate-importin alpha-beta transport complex that passes though the nuclear pore complexes (NPC) contains a N-terminal importin beta binding domain (IBB domain)DPPA0090b03.f1-3_x_part2 CDS92480 1521 - 0.450362
g1221 PPL_01428 DPPA0090b03.f1-3_x_part2 CDS96907 3009 + 0.387836
g1222 PPL_01429 DPPA0090b03.f1-3_x_part2 CDS101874 1302 + 0.420891
g1223 PPL_01430 DPPA0090b03.f1-3_x_part2 CDS103502 930 - 0.317204
g1224 PPL_01431 DPPA0090b03.f1-3_x_part2 CDS105367 843 + 0.297746
g1225 PPL_01432 DPPA0090b03.f1-3_x_part2 CDS106874 3351 + 0.379887
g1226 PPL_01433 DPPA0090b03.f1-3_x_part2 CDS112634 1278 - 0.312207
g1227 PPL_01434 DPPA0090b03.f1-3_x_part2 CDS115609 780 + 0.35
g1228 PPL_01436 DPPA0090b03.f1-3_x_part2 CDS118052 738 + 0.350949
g1229 PPL_01437 DPPA0090b03.f1-3_x_part2 CDS119251 1500 - 0.402667
g1230 PPL_01438 DPPA0090b03.f1-3_x_part2 CDS124577 3234 + 0.461657
g1231 PPL_12786 DPPA0090b03.f1-3_x_part2 CDS128089 501 - 0.353293
g1232 PPL_12787 DPPA0090b03.f1-3_x_part2 CDS128997 270 + 0.440741
g1233 PPL_12788 DPPA0090b03.f1-3_x_part2 CDS129803 4185 - 0.359618
g1234 PPL_12789 DPPA0090b03.f1-3_x_part2 CDS134335 2307 - 0.365843
g1235 PPL_01440 DPPA0090b03.f1-3_x_part2 CDS137771 1731 + 0.425188
g1236 PPL_01442 DPPA0090b03.f1-3_x_part2 CDS140212 6231 + 0.420318
g1237 PPL_01444 DPPA0090b03.f1-3_x_part2 CDS147082 942 + 0.334395
g1238 PPL_01445 cytochrome b5 is a membrane bound hemoprotein that functions as an electron carrier for several membrane bound oxygenases contains a single C-terminal transmembrane domainDPPA0090b03.f1-3_x_part2 CDS150129 363 + 0.355372
g1239 PPL_01447 DPPA0090b03.f1-3_x_part2 CDS152496 3123 + 0.414025
g1240 PPL_01449 DPPA0090b03.f1-3_x_part2 CDS156449 1653 + 0.345433
g1241 PPL_01450 DPPA0090b03.f1-3_x_part2 CDS158351 1920 - 0.396875
g1242 PPL_01451 DPPA0090b03.f1-3_x_part2 CDS160968 1713 + 0.402218
g1243 PPL_01452 DPPA0090b03.f1-3_x_part2 CDS162874 2643 - 0.398411
g1244 PPL_01453 DPPA0090b03.f1-3_x_part2 CDS166326 2991 - 0.422601
g1245 PPL_01454 DPPA0090b03.f1-3_x_part2 CDS170894 8907 - 0.414169
g1246 PPL_01455 DPPA0090b03.f1-3_x_part2 CDS181189 2070 + 0.403865
g1247 PPL_01456 DPPA0090b03.f1-3_x_part2 CDS184284 357 - 0.467787
g1248 PPL_01457 DPPA0090b03.f1-3_x_part2 CDS185970 1812 + 0.451435
g1249 PPL_01458 catalyzes the reaction CDP-choline 12-diacylglycerol CMP a phosphatidylcholineDPPA0090b03.f1-3_x_part2 CDS188566 2562 + 0.400468
g1250 PPL_12790 DPPA0090b03.f1-3_x_part2 CDS193137 351 - 0.276353
g1251 PPL_01459 DPPA0090b03.f1-3_x_part2 CDS194146 8523 + 0.334507
g1252 PPL_01461 DPPA0090b03.f1-3_x_part2 CDS206222 966 - 0.393375
g1253 PPL_01462 CLC chloride channels are conserved from prokaryotes to mammals where they play broad physiological roles they assemble to form homo-dimers br bNomenclature conflict:b Do not confuse this gene with clc also known as clcA encoding the clathrin light chainDPPA0090b03.f1-3_x_part2 CDS208249 2505 - 0.434331
g1254 PPL_01463 phosphoinositide phosphatase with low specific activity compared to other known phosphoinositide phosphatases can dephosphorylate several phosphoinositide substrates with a preference for PI(5)P constitutively expressed putative ortholog of H. sapiens EPM2A involved in myoclonic epilepsy of LaforaDPPA0090b03.f1-3_x_part2 CDS213426 702 + 0.465812
g1255 PPL_01465 putative Ca2 channel similar to metazoan polycystin-2 (PKD2) defects in the human PKD2 causes polycystic kidney disease autosomal dominant type 2 (ADPKD2) characterized by progressive formation and enlargement of cysts in both kidneys contains 6 putative transmembrane domainsDPPA0090b03.f1-3_x_part2 CDS214287 2232 - 0.331093
g1256 PPL_01466 DPPA0090b03.f1-3_x_part2 CDS218466 1893 - 0.359746
g1257 PPL_01467 DPPA0090b03.f1-3_x_part2 CDS222695 3240 - 0.414198
g1258 PPL_01468 DPPA0090b03.f1-3_x_part2 CDS226806 417 - 0.395683
g1259 PPL_12791 DPPA0090b03.f1-3_x_part2 CDS228731 825 + 0.361212
g1260 PPL_01469 DPPA0090b03.f1-3_x_part2 CDS230750 1419 + 0.360113
g1261 PPL_01471 DPPA0090b03.f1-3_x_part2 CDS234943 1167 + 0.461868
g1262 PPL_01472 similar to S. cerevisiae RAD50 involved in processing double-strand DNA breaks with Mre11 in other organisms Rad50 is part of a complex with Mre11 and Nbs1 no Nbs1 ortholog has been found in Dictyostelium DPPA0090b03.f1-3_x_part2 CDS236546 3906 + 0.426523
g1263 PPL_01473 DPPA0090b03.f1-3_x_part2 CDS240766 570 - 0.373684
g1264 PPL_01474 DPPA0090b03.f1-3_x_part2 CDS242002 1083 + 0.365651
g1266 PPL_01476 DPPA0090b03.f1-3_x_part2 CDS246133 1884 + 0.352442
g1267 PPL_01477 DPPA0090b03.f1-3_x_part2 CDS249007 576 + 0.409722
g1268 PPL_01478 DPPA0090b03.f1-3_x_part2 CDS250162 6513 + 0.401505
g1269 PPL_01479 DPPA0090b03.f1-3_x_part2 CDS257927 1704 + 0.433099
g1270 PPL_01480 DPPA0090b03.f1-3_x_part2 CDS261079 4413 - 0.514163
g1271 PPL_01481 DPPA0090b03.f1-3_x_part2 CDS266826 381 - 0.433071
g1272 PPL_01482 DPPA0090b03.f1-3_x_part2 CDS268462 2862 - 0.509783
g1273 PPL_01483 DPPA0090b03.f1-3_x_part2 CDS272830 597 - 0.368509
g1274 PPL_01484 DPPA0090b03.f1-3_x_part2 CDS275792 1461 + 0.379192
g1275 PPL_12792 DPPA0090b03.f1-3_x_part2 CDS277440 2634 + 0.356872
g1276 PPL_01486 DPPA0090b03.f1-3_x_part2 CDS280267 1284 - 0.331776
g1277 PPL_12793 DPPA0090b03.f1-3_x_part2 CDS283350 1263 - 0.34996
g1278 PPL_01487 DPPA0090b03.f1-3_x_part2 CDS284987 1143 - 0.392826
g1279 PPL_12794 DPPA0090b03.f1-3_x_part2 CDS286927 1650 - 0.398788
g1280 PPL_01489 DPPA0090b03.f1-3_x_part2 CDS289129 1380 + 0.371739
g1281 PPL_01491 DPPA0090b03.f1-3_x_part2 CDS292465 321 - 0.47352
g1282 PPL_01492 DPPA0090b03.f1-3_x_part2 CDS293366 1500 + 0.38
g1283 PPL_01493 DPPA0090b03.f1-3_x_part2 CDS295057 2265 - 0.416336
g1284 PPL_01494 DPPA0090b03.f1-3_x_part2 CDS299699 3210 + 0.431464
g1285 PPL_01495 DPPA0090b03.f1-3_x_part2 CDS303752 1710 + 0.361403
g1286 PPL_01496 EIF2S1 ortholog the eukaryotic initiation factor 2 alpha subunit in human binds to the 40S ribosome and to the mRNA for form a preinitiation complex contains an S1 RNA-binding domain characteristic of eIF2alphaDPPA0090b03.f1-3_x_part2 CDS306259 972 - 0.406379
g1287 PPL_01498 dual specificity phosphatases remove phosphate groups from tyrosine and serinethreonine residues DPPA0090b03.f1-3_x_part2 CDS310409 1431 + 0.441649
g1288 PPL_01499 ortholog of the F subunit of vacuolar ATP synthase that generates an acidic environment in several intracellular compartments V-ATPases consist of peripheral (V1) and membrane integral (V0) heteromultimeric complexes the F subunit is part of the V1 subunitDPPA0090b03.f1-3_x_part2 CDS312085 318 - 0.327044
g1289 PPL_01500 DPPA0090b03.f1-3_x_part2 CDS314078 777 + 0.387387
g1290 PPL_01501 DPPA0090b03.f1-3_x_part2 CDS315461 948 - 0.397679
g1291 PPL_01502 DPPA0090b03.f1-3_x_part2 CDS317482 9306 + 0.382549
g1292 PPL_12795 DPPA0090b03.f1-3_x_part2 CDS327939 1353 - 0.373245
g1293 PPL_12796 DPPA0090b03.f1-3_x_part2 CDS331356 777 - 0.339768
g1294 PPL_01504 involved in pseudopod formation contains an N-terminal ADFcofilin-like actin binding domain and a c-terminal SH3 domain there is a second copy of this gene DPPA0090b03.f1-3_x_part2 CDS332860 1344 + 0.470238
g1295 PPL_01505 DPPA0090b03.f1-3_x_part2 CDS334946 1719 + 0.381617
g1296 PPL_01506 DPPA0090b03.f1-3_x_part2 CDS337011 213 - 0.403756
g1297 PPL_01507 DPPA0090b03.f1-3_x_part2 CDS337961 1377 - 0.411038
g1298 PPL_01508 DPPA0090b03.f1-3_x_part2 CDS339937 2127 + 0.410907
g1299 PPL_01509 DPPA0090b03.f1-3_x_part2 CDS343493 282 + 0.351064
g1300 PPL_01510 DPPA0090b03.f1-3_x_part2 CDS344341 2469 - 0.398137
g1301 PPL_01512 DPPA0090b03.f1-3_x_part2 CDS347714 1149 + 0.43255
g1302 PPL_12797 DPPA0090b03.f1-3_x_part2 CDS349635 807 + 0.42627
g1303 PPL_12798 DPPA0090b03.f1-3_x_part2 CDS351377 624 - 0.331731
g1304 PPL_12799 DPPA0090b03.f1-3_x_part2 CDS352373 771 - 0.333333
g1305 PPL_01514 DPPA0090b03.f1-3_x_part2 CDS354016 972 + 0.435185
g1306 PPL_01515 DPPA0090b03.f1-3_x_part2 CDS357828 2646 + 0.420635
g1307 PPL_01516 DPPA0090b03.f1-3_x_part2 CDS360946 1941 - 0.424523
g1308 PPL_01517 DPPA0090b03.f1-3_x_part2 CDS364146 1716 + 0.409674
g1309 PPL_01519 DPPA0090b03.f1-3_x_part2 CDS366181 3984 - 0.401857
g1310 PPL_01520 similar to S. cerevisiae MRE11 involved in processing double-strand DNA breaks with Rad50 in other organisms Mre11 is part of a complex with Rad50 and Nbs1 no Nbs1 ortholog has been found in Dictyostelium DPPA0090b03.f1-3_x_part2 CDS371910 2199 - 0.390177
g1311 PPL_01521 DPPA0090b03.f1-3_x_part2 CDS374970 1332 + 0.394144
g1312 PPL_12800 DPPA0090b03.f1-3_x_part2 CDS376564 1254 + 0.38437
vatE PPL_01475 ortholog of the E subunit of vacuolar ATP synthase that generates an acidic environment in several intracellular compartments V-ATPases consist of peripheral (V1) and membrane integral (V0) heteromultimeric complexes the E subunit is part of the V1 subunitDPPA0090b03.f1-3_x_part2 CDS243414 666 - 0.453453