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2024-06-02 14:32:50

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: DDB0232428

Number of genes found: 20

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DDB_G0267954 DDB_G0267954 contains a C-terminal Bicoid-interacting 3 domain which occurs in methyltransferases that modify RNA-binding proteins has similarity to mammalian 7SK snRNA methylphosphate capping enzyme DDB0232428 CDS1175758 1302 + 0.195853
DDB_G0268118 DDB_G0268118 DDB0232428 CDS1481369 2298 + 0.302437
DDB_G0268980_ps DDB_G0268980 putative pseudogene fragment very similar to parts of DDB_G0268948 a putative SAM dependent methyltransferaseDDB0232428 CDS2065538 243 - 0.288066
DDB_G0269348 DDB_G0269348 DDB0232428 CDS2570683 1911 - 0.244898
DDB_G0269356 DDB_G0269356 DDB0232428 CDS2583576 819 + 0.246642
DDB_G0269452 DDB_G0269452 DDB0232428 CDS2799520 2991 - 0.248412
DDB_G0269592 DDB_G0269592 DDB0232428 CDS3083994 1326 - 0.257164
DDB_G0269658 DDB_G0269658 DDB0232428 CDS3247871 813 + 0.268143
DDB_G0269722 DDB_G0269722 belongs to the methyltransferase superfamily ortholog of human WBSCR22 an uncharacterized methyltransferase associated with Williams-Beuren syndromeDDB0232428 CDS3414230 864 + 0.340278
DDB_G0270714_ps DDB_G0270714 putative pseudogene similar to a family of genes including DDB0232428 CDS4096586 621 + 0.31562
DDB_G0270766 DDB_G0270766 DDB0232428 CDS4499254 2994 + 0.257515
amdhd1 DDB_G0269854 catalyzes the reaction (S)-3-(5-oxo-45-dihydro-3H-imidazol-4-yl)propanoate H2O N-formimidoyl-L-glutamate HDDB0232428 CDS3737738 1281 - 0.34192
cyp513A3 DDB_G0270354 DDB0232428 CDS4697435 1479 + 0.254226
cyp524A1 DDB_G0269016 DDB0232428 CDS2256023 1599 + 0.372108
fah DDB_G0271094 catalyzes the reaction 4-fumarylacetoacetate Hsub2subO acetoacetate fumarateDDB0232428 CDS3369734 1284 - 0.327882
hdaA DDB_G0268024 DDB0232428 CDS1320084 1488 - 0.303763
hdaB DDB_G0270338 DDB0232428 CDS4667184 1269 + 0.300236
pks2 DDB_G0270572 DDB0232428 CDS3098695 9033 + 0.275213
pks3 DDB_G0271000 DDB0232428 CDS3963577 8514 - 0.262626
stlA DDB_G0269364 belongs to the beta-ketoacyl synthase family type III polyketide synthase catalyzes iterative polyketide extension from hexanoyl-CoA can catalyze three polyketide chain extensions followed by aldol cyclization to synthesize demethyl-4-methyl-5-pentylbenzene-13-diol (MPBD) starter unit can vary from acyl CoA substrates ranging from 3-20 carbons br bNomenclature conflict:b Do not confuse the stlA gene encoding a polyketide synthase with the stlA locus associated with deficient stalk formation (DDB0232428 CDS2612482 9444 - 0.285155