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2024-04-16 21:34:41

Gene list

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COG category: Nucleotide transport and metabolism

Number of genes found: 346

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Dictyostelium discoideum AX4, AX4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DDB_G0268194 DDB_G0268194 catalyzes the reaction Hsub2subO dCTP - NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232428 CDS1641107 768 - 0.311198
DDB_G0271914 DDB_G0271914 DDB0232429 CDS1000440 675 - 0.358519
DDB_G0272030 DDB_G0272030 DDB0232429 CDS1189650 678 - 0.361357
DDB_G0272048 DDB_G0272048 DDB0232429 CDS1193466 1176 - 0.271259
DDB_G0272442 DDB_G0272442 DDB0232429 CDS1598330 705 - 0.307801
DDB_G0272839 DDB_G0272839 has a short region of similarity to aprataxin a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxiaDDB0232429 CDS2148504 1173 + 0.224211
DDB_G0273137 DDB_G0273137 there is a second copy of this gene DDB0232429 CDS2854787 1818 + 0.262376
DDB_G0273617 DDB_G0273617 there is a second copy of this gene DDB0232429 CDS3174939 1818 - 0.262376
DDB_G0275179 DDB_G0275179 similar to H. sapiens CECR1 protein (Swiss Prot Q9NZK5)DDB0232429 CDS5345936 1632 + 0.273284
DDB_G0275307 DDB_G0275307 DDB0232429 CDS5319128 810 - 0.22716
DDB_G0275667 DDB_G0275667 homolog of human and S. cerevisiae KTI12 (killer toxin insensitivity protein 12) S. cerevisiae KTI12 interacts with the Elongator complex a component of the elongating form of RNA polymerase II DDB0232429 CDS5787522 822 - 0.283455
DDB_G0276407 DDB_G0276407 DDB0232429 CDS6832640 1236 + 0.279935
DDB_G0277355 DDB_G0277355 DDB0232429 CDS7838828 969 - 0.415893
DDB_G0277515 DDB_G0277515 DDB0232429 CDS8077667 1542 - 0.323606
DDB_G0277559 DDB_G0277559 contains a predicted signal peptide and a putative C-terminal transmembrane domain similar to D. purpureum proteinDDB0232429 CDS8125465 1938 - 0.209494
DDB_G0278493 DDB_G0278493 DDB0232430 CDS967226 528 + 0.263258
DDB_G0278573 DDB_G0278573 DDB0232430 CDS1094317 810 + 0.245679
DDB_G0278841 DDB_G0278841 DDB0232430 CDS1265394 1560 - 0.253846
DDB_G0281219 DDB_G0281219 DDB0232430 CDS4234799 1131 - 0.290893
DDB_G0282171 DDB_G0282171 DDB0232430 CDS5485189 684 - 0.387427
DDB_G0282255 DDB_G0282255 DDB0232430 CDS5579876 1152 - 0.366319
DDB_G0285299 DDB_G0285299 DDB0232431 CDS3070354 1635 - 0.310092
DDB_G0285467 DDB_G0285467 DDB0232431 CDS3266519 1398 + 0.326896
DDB_G0285539 DDB_G0285539 DDB0232431 CDS3354945 1575 + 0.233016
DDB_G0286085 DDB_G0286085 DDB0232431 CDS4039412 1188 - 0.222222
DDB_G0286161 DDB_G0286161 DDB0232431 CDS4152139 1269 + 0.291568
DDB_G0287551 DDB_G0287551 DDB0232432 CDS406658 1368 + 0.284357
DDB_G0287753 DDB_G0287753 DDB0232432 CDS656012 891 + 0.251403
DDB_G0287839 DDB_G0287839 DDB0232432 CDS789237 1452 + 0.309917
DDB_G0287985 DDB_G0287985 DDB0232432 CDS933669 912 + 0.3125
DDB_G0288019 DDB_G0288019 DDB0232432 CDS981451 720 - 0.306944
DDB_G0288099 DDB_G0288099 DDB0232432 CDS1100340 765 - 0.256209
DDB_G0289439 DDB_G0289439 DDB0232432 CDS2778983 405 + 0.367901
DDB_G0291478 DDB_G0291478 DDB0232433 CDS405733 1263 - 0.257324
DDB_G0291764 DDB_G0291764 related to ribonucleotide reductase small subunit missing about 25DDB0232433 CDS704842 774 + 0.239018
DDB_G0292080 DDB_G0292080 DDB0232433 CDS1159633 972 + 0.359053
DDB_G0292096 DDB_G0292096 contains a cytidine and deoxycytidylate deaminase zinc-binding region contains a carbohydrate-binding domain contains a predicted signal peptideDDB0232433 CDS1176701 966 - 0.421325
DDB_G0292246 DDB_G0292246 DDB0232433 CDS1370987 891 + 0.274972
DDB_G0292298 DDB_G0292298 DDB0232433 CDS1424473 501 - 0.307385
DDB_G0292928 DDB_G0292928 DDB0232433 CDS2282811 483 - 0.233954
DDB_G0293580 DDB_G0293580 catalyzes the reaction Hsub2subO dCTP NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232433 CDS3073231 525 - 0.289524
ada DDB_G0287371 catalyzes the reaction Hsub2subO adenosine NHsub3sub inosine in salvage pathways of nucleosides contains two tandem repeats of the adenosine deaminase domainDDB0232432 CDS206705 2319 + 0.287193
adkA DDB_G0283805 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesisDDB0232431 CDS1124176 831 - 0.32491
adkB DDB_G0292730 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearDDB0232433 CDS2003598 699 - 0.291846
allB1 DDB_G0282199 catalyzes the reaction Hsub2subO allantoin allantoateDDB0232430 CDS5513834 1950 + 0.318462
allB2 DDB_G0270162 catalyzes the reaction Hsub2subO allantoin allantoate expressed in upper cup cells during culminationDDB0232428 CDS4345093 1533 + 0.262231
allC DDB_G0280267 catalyzes the reaction allantoate Hsub2subO (S)-ureidoglycolate urea in allantoin degradationDDB0232430 CDS3183979 1110 + 0.336036
amdA DDB_G0292266 required for spore formation inhibits the formation of aspidocytes catalyzes the reaction AMP Hsub2subO IMP NHsub3subbr bNomenclature conflict: b Do not confuse this gene with amd1 encoding S-adenosylmethionine decarboxylaseDDB0232433 CDS1491265 2373 - 0.313527
aprt DDB_G0270174 catalyzes the reaction AMP pyrophosphate PRPP adenine in nucleoside salvage pathwaysDDB0232428 CDS4368158 600 + 0.29
cda DDB_G0288933 catalyzes the reactions cytidine Hsub2subO uridine NHsub3sub and Hsub2subO deoxycytidine NHsub3sub deoxyuridineDDB0232432 CDS2144804 444 - 0.351351
ctps DDB_G0280567 catalyzes the reaction L-glutamine Hsub2subO UTP ATP - CTP phosphate ADP L-glutamate in de novo biosynthesis of pyrimidine ribonucleotidesDDB0232430 CDS3510967 1710 - 0.350292
dak DDB_G0278191 catalyzes the reaction ATP deoxyadenosine ADP dAMPDDB0232430 CDS426271 738 + 0.285908
dgk DDB_G0280843 catalyzes the reaction ATP deoxyguanosine ADP dGMPDDB0232430 CDS1424429 858 - 0.226107
dtymk DDB_G0290033 catalyzes the reaction dTMP ATP dTDP ADP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232432 CDS3573621 669 - 0.258595
dut DDB_G0293374 catalyses the reaction Hsub2subO dUTP pyrophosphate dUMP in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232433 CDS2804871 540 - 0.327778
fhit DDB_G0274257 ortholog of human FHIT which is a possible tumor suppressor for specific tissues numerous tumor types are associated with aberrant forms of human FHIT proteinDDB0232429 CDS4124527 450 - 0.311111
fthS DDB_G0290397 catalyzes the reaction ATP formate tetrahydrofolate ADP phosphate N10-formyl-Hsub4subF in various biosynthetic pathways in plants and in Dictyostelium this is a monofunctional enzyme while in yeast and in metazoan the same enzyme has two additional activities encoded by DDB0232432 CDS4031914 1917 + 0.383933
gghA DDB_G0286535 DDB0232431 CDS4609676 954 - 0.328092
gghB DDB_G0289365 DDB0232432 CDS2708637 1044 - 0.229885
gmkA DDB_G0279001 catalyzes the reaction GMP ATP GDP ADP in the de novo and salvage pathways of purine and pyrimidine nucleotidesDDB0232430 CDS1502267 609 + 0.279146
guaA DDB_G0281551 catalyzes the reaction xanthosine-5-phosphate Hsub2subO L-glutamine ATP L-glutamate GMP pyrophosphate AMP in GMP biosynthesisDDB0232430 CDS4709076 2157 + 0.304126
guaB DDB_G0283701 catalyzes the reaction Hsub2subO NAD IMP xanthosine-5-phosphate NADH the first step of GMP biosynthesisDDB0232431 CDS1000722 1548 - 0.386305
guaD DDB_G0277743 catalyzes the reaction guanine Hsub2subO xanthine NHsub3subDDB0232429 CDS8417392 1353 + 0.311899
hprT DDB_G0285193 catalyzes the reaction PRPP hypoxanthine pyrophosphate IMP in the salvage pathways of purine nucleosides br overexpressed in dstB (STATb) null mutantsDDB0232431 CDS2972049 543 + 0.281768
itpa DDB_G0286495 ortholog of human ITPA and S. cerevisiae HAM1 hydrolyzes ITP and dITP to their respective monophosphate derivatives defects in human ITPA cause inosine triphosphate pyrophosphohydrolase deficiency characterized by an abnormal accumulation of inosine triphosphate in erythrocytes however pathological symptoms are not knownDDB0232431 CDS4555858 585 - 0.309402
iunH DDB_G0272738 catalyzes the reaction N-D-ribosylpurine Hsub2subO purine D-riboseDDB0232429 CDS2227186 1023 + 0.311828
mcfZ DDB_G0293874 belongs to the substrate carrier protein family involved in transport of molecules across the mitochondrial membrane expressed in pstAO cells and in upper and lower cups during culminationbrbr bCommunity annotation:b Overview of the DDB0232433 CDS3410167 906 + 0.36755
mth DDB_G0293766 DDB0232433 CDS3300203 486 + 0.238683
ndkC-1 DDB_G0273069 catalyzes the phosphorylation of nucleoside or deoxynucleoside diphosphates into the corresponding triphosphates there is a second copy of this gene DDB0232429 CDS2603092 468 - 0.397436
ndkC-2 DDB_G0273805 catalyzes the phosphorylation of nucleoside or deoxynucleoside diphosphates into the corresponding triphosphates there is a second copy of this gene DDB0232429 CDS3427961 468 + 0.397436
ndkM DDB_G0279911 DDB0232430 CDS2740248 663 + 0.380091
ndrJ DDB_G0292654 similar to class II ribonucleotide reductase a monomeric form of ribonucleotide reductase that uses ribonucletide triphosphates rather than diphosphates as substrates the only other eukaryote in which this enzyme is present is Euglena gracilisDDB0232433 CDS1906693 2277 + 0.312692
pkiA DDB_G0289391 DDB0232432 CDS2783089 384 + 0.351562
prsA DDB_G0284669 ortholog of PRS involved in nucleotide histidine and tryptophan biosynthesisDDB0232431 CDS2322296 954 + 0.318658
prsB DDB_G0272246 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisDDB0232429 CDS1758981 990 - 0.29596
prsC DDB_G0283627 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisDDB0232431 CDS883884 966 - 0.284679
purA DDB_G0285429 catalyzes the reaction L-aspartate IMP GTP adenylo-succinate phosphate GDP in de novo DNA synthesisDDB0232431 CDS3358729 1284 + 0.348131
purB DDB_G0288333 catalyzes two reactions in de novo DNA synthesis: 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole fumarate AICAR and adenylo-succinate fumarate AMPDDB0232432 CDS1402047 1401 + 0.33262
purC%2FE DDB_G0283987 bifunctional enzyme composed of SAICAR synthase and AIR carboxylase that catalyze steps in de novo DNA synthesisDDB0232431 CDS1280148 2994 + 0.325985
purD DDB_G0290121 bifunctional enzyme of the de novo DNA synthesis pathway contains aminoimidazole ribotide synthetase and glycinamide ribotide synthetase activitiesDDB0232432 CDS3683216 2448 + 0.318219
purF DDB_G0274321 catalyzes the reaction L-glutamine PRPP Hsub2subO 5-phospho-beta-D-ribosyl-amine pyrophosphate L-glutamate the first step in de novo DNA synthesisDDB0232429 CDS3954678 1566 + 0.393997
purH DDB_G0277087 bifunctional enzyme that catalyzes the reactions Nsup10sup-formyl-Hsub4subF AICAR tetrahydrofolate phosphoribosyl-formamido-carboxamide and phosphoribosyl-formamido-carboxamide IMP Hsub2subO expressed in prespore cellsDDB0232429 CDS7485197 1629 - 0.349908
purL DDB_G0288145 catayzes the reaction ATP 5'-phosphoribosyl-N-formylglycineamide L-glutamine Hsub2subO ADP phosphate 5-phosphoribosyl-n-formylglycineamidine L-glutamate in de novo DNA synthesisDDB0232432 CDS1141268 4068 + 0.342429
purN DDB_G0288985 catalyzes the reaction N10-formyl-Hsub4subF 5-phospho-ribosyl-glycineamide tetrahydrofolate 5'-phosphoribosyl-N-formylglycineamide in de novo DNA synthesisDDB0232432 CDS2206145 621 + 0.275362
pyd2 DDB_G0269246 ortholog of the human DPYS defects in DPYS cause cause of DHP (dihydropyrimidinase) deficiency second enzyme in the reductive pyrimidine degradation pathway (EC 3.5.2.2) catalyzes the reaction: 56-dihydrouracil Hsub2subO 3-ureidopropanoateDDB0232428 CDS3157203 1512 - 0.355159
pyr1-3 DDB_G0276335 multifunctional enzyme that carries out the three first enzymatic activities of the de novo pyrimidine biosynthetic pathway very similar to the tri-functional human CAD enzymeDDB0232429 CDS6728694 6678 + 0.351003
pyr4 DDB_G0276331 catalyzes the reaction Osub2sub dihydroorotate Hsub2subOsub2sub orotate in de novo biosynthesis of pyrimidine ribonucleotidesDDB0232429 CDS6726246 1113 - 0.34142
pyr56 DDB_G0280041 bifunctional enzyme that catalyzes the reactions PRPP orotate orotidine-5'-phosphate pyrophosphate and orotidine-5'-phosphate COsub2sub UMP in de novo biosynthesis of pyrimidine ribonucleotidesDDB0232430 CDS3010631 1437 + 0.338205
pyrK DDB_G0287495 phosphorylates dCMP and dUMP to dCDP and dUDP respectivelyDDB0232432 CDS334067 588 + 0.289116
rnrA DDB_G0284071 catalyzes the reaction 2'-deoxyribonucleoside diphosphate thioredoxin disulfide Hsub2subO ribonucleoside diphosphate reduced thioredoxinDDB0232431 CDS1503516 2613 + 0.381554
rnrB-1 DDB_G0272616 catalyzes the reaction 2'-deoxyribonucleoside diphosphate thioredoxin disulfide Hsub2subO ribonucleoside diphosphate reduced thioredoxin there is a second copy of this gene DDB0232429 CDS2355911 1017 + 0.301868
rnrB-2 DDB_G0274021 catalyzes the reaction 2'-deoxyribonucleoside diphosphate thioredoxin disulfide Hsub2subO ribonucleoside diphosphate reduced thioredoxin there is a second copy of this gene DDB0232429 CDS3674573 1017 - 0.301868
thyA DDB_G0280045 catalyzes the reaction 510-methylenetetrahydrofolate dUMP FADHsub2sub dTMP tetrahydrofolate FAD in de novo biosynthesis of pyrimidine deoxyribonucleotidesDDB0232430 CDS3175236 912 + 0.337719
thyB DDB_G0289179 calmodulin-binding thymidine kinase 1 that is very similar to human TK1 catalyzes the reaction ATP thymidine ADP thymidine 5'-phosphateDDB0232432 CDS2508266 684 - 0.330409
udkA DDB_G0269034 catalyzes the reaction ATP uridine ADP UMPDDB0232428 CDS2213969 1500 - 0.292
udkB DDB_G0274559 catalyzes the reaction ATP uridine ADP UMPDDB0232429 CDS4144032 732 - 0.325137
udkC DDB_G0283371 contains a N-terminal uridine kinase domaine domain and a C-terminal adenylate cyclase domain like the UdkD protein and other plant proteinsDDB0232431 CDS600577 1350 - 0.297778
udkD DDB_G0271146 contains a N-terminal uridine kinase domaine domain and a C-terminal adenylate cyclase domain like the UdkC protein and other plant proteinsDDB0232429 CDS69676 1479 - 0.294118
udpA DDB_G0284431 catalyzes the reaction phosphate uridine ribose-1-phosphate uracil in salvage pathways of pyrimidine ribonucleotides and deoxyribose phosphate degradationDDB0232431 CDS1983105 750 - 0.4
udpB DDB_G0280985 catalyzes the reaction phosphate uridine ribose-1-phosphate uracil in salvage pathways of pyrimidine ribonucleotides and deoxyribose phosphate degradationDDB0232430 CDS3914149 870 - 0.310345
uprt DDB_G0267560 catalyzes the reaction UMP diphosphate uracil 5-phospho-alpha-D-ribose 1-diphosphateDDB0232428 CDS336383 651 + 0.294931
xdh DDB_G0291047 catalyzes the reactions xanthine NAD Hsub2subO urate NADH H and xanthine Hsub2subO Osub2sub urate Hsub2subOsub2subDDB0232432 CDS4822800 4077 + 0.347559
 
Dictyostelium fasciculatum, SH3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10200 DFA_13285 EU5ZYIE02H8LDV-5 CDS1862274 1113 - 0.299191
g10429 DFA_10847 EUAJFUG01CK1KI-5 CDS525545 2406 + 0.371987
g10625 DFA_11044 EUAJFUG02HR96I-5 CDS60592 423 + 0.375887
g10666 DFA_11081 EUAJFUG02HR96I-5 CDS151844 570 - 0.345614
g10999 DFA_11418 EUAJFUG02HR96I-5 CDS1073252 585 + 0.367521
g1116 DFA_01106 Dfasci-F-a-25c12.r2-5 CDS1992021 603 - 0.361526
g11304 DFA_11724 EUAJFUG02HR96I-5 CDS1847807 1905 + 0.48399
g11753 DFA_12229 EUAJFUG02HR96I-5 CDS3070407 1608 + 0.535448
g11796 DFA_12272 EUAJFUG02HR96I-5 CDS3188865 645 + 0.406202
g11817 DFA_12297 EUAJFUG02HR96I-5 CDS3236455 813 + 0.378844
g1328 DFA_01328 Dfasci-F-a-25c12.r2-5 CDS2491157 2226 + 0.345912
g139 DFA_00137 Dfasci-F-a-11f03.f1-5 CDS400250 537 + 0.350093
g1480 DFA_01488 Dfasci-F-a-25c12.r2-5 CDS2863796 1614 - 0.366791
g1481 DFA_01489 Dfasci-F-a-25c12.r2-5 CDS2866034 1566 - 0.420817
g1482 DFA_01490 Dfasci-F-a-25c12.r2-5 CDS2868510 1566 - 0.384419
g1554 DFA_12538 Dfasci-F-a-25c12.r2-5 CDS3049984 1521 - 0.508218
g1574 DFA_01579 Dfasci-F-a-25c12.r2-5 CDS3095146 819 + 0.437118
g1622 DFA_01636 Dfasci-F-a-25c12.r2-5 CDS3234204 951 + 0.459516
g1661 DFA_01675 Dfasci-F-a-25c12.r2-5 CDS3338458 648 - 0.384259
g1737 DFA_01755 Dfasci-F-a-25c12.r2-5 CDS3544100 1332 - 0.442192
g1890 DFA_01919 Dfasci-F-a-25c12.r2-5 CDS3954996 1944 - 0.459362
g2011 DFA_02044 Dfasci-G-b-126g04.f1-5 CDS84358 1440 + 0.377083
g2119 DFA_02170 Dfasci-G-b-126g04.f1-5 CDS392465 831 + 0.399519
g2196 DFA_02246 Dfasci-G-b-143d02.r1-5 CDS82127 615 + 0.362602
g2229 DFA_02276 Dfasci-G-b-143d02.r1-5 CDS165643 555 + 0.374775
g2282 DFA_02329 Dfasci-G-b-143d02.r1-5 CDS299762 1443 - 0.348579
g26 DFA_12376 Dfasci-F-a-11f03.f1-5 CDS57787 1677 + 0.392367
g2660 DFA_02717 Dfasci-G-b-205a01.r1-3 CDS26402 780 - 0.357692
g2976 DFA_03058 Dfasci-G-b-205a01.r1-3 CDS868555 753 - 0.479416
g3039 DFA_03122 Dfasci-G-b-205a01.r1-3 CDS1007904 1461 + 0.323066
g3335 DFA_03434 Dfasci-G-b-205a01.r1-3 CDS1825491 459 - 0.498911
g3364 DFA_03467 Dfasci-G-b-205a01.r1-3 CDS1932024 1404 - 0.405983
g3371 DFA_03473 Dfasci-G-b-205a01.r1-3 CDS1960805 762 - 0.339895
g353 DFA_00340 Dfasci-F-a-25c12.r2-5 CDS26647 4113 - 0.389983
g3765 DFA_03907 Dfasci-G-b-285a01.f1-5 CDS545074 1284 + 0.442368
g3809 DFA_03951 Dfasci-G-b-285a01.f1-5 CDS661580 1335 - 0.426217
g4117 DFA_04274 Dfasci-G-o-33e01.r1-3 CDS120713 1047 + 0.446036
g4209 DFA_04368 Dfasci-G-o-33e01.r1-3 CDS381610 984 + 0.477642
g4395 DFA_04551 Dfasci-G-o-33e01.r1-3 CDS826456 432 - 0.358796
g4517 DFA_04681 Dfasci-G-o-33e01.r1-3 CDS1134645 975 - 0.373333
g4532 DFA_04698 Dfasci-G-o-33e01.r1-3 CDS1167842 1545 - 0.450485
g4627 DFA_04798 Dfasci-G-o-33e01.r1-3 CDS1379174 639 + 0.345853
g4629 DFA_04800 Dfasci-G-o-33e01.r1-3 CDS1382720 1647 + 0.411658
g4674 DFA_04840 Dfasci-G-o-80e12.f1-5 CDS66633 798 - 0.344612
g4883 DFA_12809 Dfasci-G-o-80e12.f1-5 CDS612862 2439 - 0.511275
g4898 DFA_05080 Dfasci-G-o-80e12.f1-5 CDS650332 1575 - 0.511746
g5312 DFA_05520 Dfasci-G-o-80e12.f1-5 CDS1768210 558 - 0.33871
g544 DFA_00525 Dfasci-F-a-25c12.r2-5 CDS499671 978 - 0.313906
g5466 DFA_05677 Dfasci-G-o-80e12.f1-5 CDS2214370 663 + 0.334842
g5488 DFA_05699 Dfasci-G-o-80e12.f1-5 CDS2257201 603 + 0.361526
g5593 DFA_05803 Dfasci-G-o-80e12.f1-5 CDS2511804 2613 - 0.486797
g5632 DFA_05836 Dfasci-G-o-80e12.f1-5 CDS2610953 2076 - 0.485067
g5676 DFA_05879 Dfasci-G-o-80e12.f1-5 CDS2723351 1107 + 0.448058
g5775 DFA_05982 Dfasci-G-p-12c09.r1-3 CDS225164 6549 + 0.505573
g5784 DFA_05991 Dfasci-G-p-12c09.r1-3 CDS245768 1476 + 0.460027
g6310 DFA_12911 Dfasci-G-p-12c09.r1-3 CDS1618297 567 + 0.366843
g6379 DFA_06623 EJPB12P01AWP9W-5 CDS20076 1062 + 0.33145
g6450 DFA_06694 EJPB12P01AWP9W-5 CDS208638 789 + 0.314322
g6496 DFA_12932 EJPB12P01AWP9W-5 CDS340242 1368 + 0.451754
g6540 DFA_06790 EJPB12P01AWP9W-5 CDS487405 2235 + 0.420134
g6755 DFA_07014 ET2XIPL01CNAVH-3 CDS439465 948 - 0.325949
g684 DFA_00668 Dfasci-F-a-25c12.r2-5 CDS871224 918 + 0.393246
g6840 DFA_07108 ET2XIPL01CNAVH-3 CDS662097 936 - 0.386752
g7248 DFA_07515 ET2XIPL01CNAVH-3 CDS1736296 990 - 0.482828
g7376 DFA_07636 ET2XIPL01COFD4-5 CDS133169 873 - 0.413517
g7438 DFA_07698 ET2XIPL01COFD4-5 CDS305335 672 - 0.394345
g7721 DFA_07991 ET2XIPL01COFD4-5 CDS1032184 3348 - 0.415771
g7817 DFA_13074 ET2XIPL01COFD4-5 CDS1240563 375 + 0.394667
g7880 DFA_08159 ET2XIPL01COFD4-5 CDS1398090 513 + 0.368421
g8270 DFA_08568 ET2XIPL01COFD4-5 CDS2492066 1386 + 0.446609
g8273 DFA_08571 ET2XIPL01COFD4-5 CDS2497102 3039 - 0.405067
g831 DFA_00821 Dfasci-F-a-25c12.r2-5 CDS1267648 528 + 0.331439
g8685 DFA_08998 EU5ZYIE01BBABR-5 CDS103690 816 + 0.341912
g8775 DFA_09089 EU5ZYIE01BBABR-5 CDS326196 777 + 0.460746
g9161 DFA_09497 EU5ZYIE01EUG8B-5 CDS93666 621 - 0.318841
g9163 DFA_09499 EU5ZYIE01EUG8B-5 CDS97033 1380 - 0.423188
g9396 DFA_09751 EU5ZYIE01EUG8B-5 CDS822577 1686 + 0.40688
g9527 DFA_09887 EU5ZYIE02H8LDV-5 CDS224615 4017 + 0.453074
g9800 DFA_10179 EU5ZYIE02H8LDV-5 CDS902027 1266 + 0.43049
 
Dictyostelium lacteum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g1577 DLA_01730 F4PJNLW01B0TO9 CDS639088 2331 - 0.322608
g1622 DLA_01776 F4PJNLW01B0TO9 CDS736554 1275 - 0.329412
g1629 DLA_01784 F4PJNLW01B0TO9 CDS753361 1098 + 0.384335
g1755 DLA_01919 F4PJNLW01BNQ9D CDS2 1744 - 0.30906
g1761 DLA_01924 F4PJNLW01BNQ9D CDS10588 876 + 0.292237
g1783 DLA_01946 F4PJNLW01C9MXC CDS40201 1185 - 0.274262
g1818 DLA_01983 F4PJNLW01C9MXC CDS132212 1503 + 0.383234
g1891 DLA_02064 F4PJNLW01DERRH CDS3464 780 - 0.288462
g1951 DLA_02135 F4PJNLW01DERRH CDS161510 582 + 0.300687
g1977 DLA_02167 catalyzes the reaction N-D-ribosylpurine Hsub2subO purine D-riboseF4PJNLW01DERRH CDS223179 1755 - 0.366382
g2081 DLA_02287 F4PJNLW01DERRH CDS453019 774 - 0.316537
g2184 DLA_02404 F4PJNLW01DERRH CDS682692 837 + 0.293907
g2319 DLA_02564 bifunctional enzyme that catalyzes the reactions Nsup10sup-formyl-Hsub4subF AICAR tetrahydrofolate phosphoribosyl-formamido-carboxamide and phosphoribosyl-formamido-carboxamide IMP Hsub2subO expressed in prespore cellsF4PJNLW01EE5MJ CDS281676 1587 + 0.361689
g2416 DLA_02677 contains a N-terminal uridine kinase domaine domain and a C-terminal adenylate cyclase domain like the UdkC protein and other plant proteinsF4PJNLW01EE5MJ CDS480988 1494 + 0.323963
g2441 DLA_02706 F4PJNLW01EE5MJ CDS538396 1752 - 0.376142
g2600 DLA_02885 catalyzes the reaction AMP pyrophosphate PRPP adenine in nucleoside salvage pathwaysF4PJNLW01EE5MJ CDS932083 597 - 0.341709
g2762 DLA_03059 F4PJNLW02GJ9ZB CDS21863 822 - 0.341849
g2863 DLA_03172 F4PJNLW02GJ9ZB CDS242485 5940 - 0.295791
g311 DLA_11439 contig05409_1.exp CDS722598 762 + 0.341207
g3289 DLA_03640 GAOABQK02G6SYV CDS144500 1566 + 0.387612
g3363 DLA_03719 GAOABQK02G6SYV CDS292019 648 - 0.299383
g3446 DLA_03810 GAOABQK02G6SYV CDS476197 2400 + 0.371667
g3464 DLA_03828 GAOABQK02G6SYV CDS510570 4845 - 0.328173
g3507 DLA_03885 catalyzes the reaction UMP diphosphate uracil 5-phospho-alpha-D-ribose 1-diphosphateGAOABQK02G6SYV CDS621683 630 - 0.334921
g3566 DLA_03950 GAOABQK02G7M1S CDS67013 558 - 0.301075
g3617 DLA_04010 GAOABQK02G7M1S CDS189264 579 - 0.317789
g3622 DLA_04015 GAOABQK02G7M1S CDS194635 6603 - 0.377707
g3623 DLA_04017 GAOABQK02G7M1S CDS202037 1119 + 0.36193
g3993 DLA_04428 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGAOABQK02GQAQJ CDS282706 957 - 0.3814
g429 DLA_00476 contig05409_1.exp CDS972503 1317 - 0.349279
g4314 DLA_04762 GAOABQK02GQAQJ CDS980607 687 - 0.307132
g435 DLA_00484 contig05409_1.exp CDS986633 1572 - 0.321883
g4408 DLA_04873 catalyzes the reaction Hsub2subO dCTP - NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesGAOABQK02GRIAE CDS147649 738 - 0.304878
g4469 DLA_04948 GAOABQK02H81I9 CDS54369 1437 + 0.334029
g4583 DLA_05079 GAOABQK02H81I9 CDS325351 4026 + 0.360656
g5017 DLA_05556 GAOABQK02HUB3S CDS429206 945 - 0.355556
g5071 DLA_05616 catalyzes the reaction ATP uridine ADP UMPGAOABQK02HUB3S CDS560099 1386 - 0.336219
g5165 DLA_05730 GAOABQK02HUB3S CDS788372 435 - 0.351724
g5168 DLA_05734 GAOABQK02HUB3S CDS791982 351 - 0.356125
g519 DLA_00572 catalyzes the reaction Hsub2subO allantoin allantoate expressed in upper cup cells during culminationcontig05409_1.exp CDS1178580 1956 - 0.373722
g5768 DLA_06433 ortholog of human FHIT which is a possible tumor suppressor for specific tissues numerous tumor types are associated with aberrant forms of human FHIT proteinGAOABQK02IBA3P CDS399414 435 + 0.333333
g5965 DLA_06643 catalyzes the reaction ATP uridine ADP UMPGAOABQK02IBA3P CDS846253 759 + 0.333333
g5974 DLA_06651 catalyzes the reaction L-glutamine PRPP Hsub2subO 5-phospho-beta-D-ribosyl-amine pyrophosphate L-glutamate the first step in de novo DNA synthesisGAOABQK02IBA3P CDS870949 1605 - 0.356386
g6012 DLA_06694 GAOABQK02IBA3P CDS977217 1278 + 0.368545
g6045 DLA_06733 GAOABQK02IBA3P CDS1046601 750 + 0.333333
g6084 DLA_06772 GAOABQK02INHKB CDS14180 1545 - 0.368285
g621 DLA_00687 DDLF0038h09.f4 CDS6383 1383 + 0.321041
g6496 DLA_07233 GAOABQK02JEBFV CDS44856 588 + 0.306122
g6521 DLA_07263 GAOABQK02JOCCH CDS42165 2247 - 0.305296
g6553 DLA_07299 GAOABQK02JOCCH CDS109742 2556 + 0.384977
g6565 DLA_07316 GAOABQK02JOCCH CDS151107 861 - 0.335656
g6667 DLA_07428 GAOABQK02JOCCH CDS383578 390 - 0.34359
g6673 DLA_07433 GAOABQK02JOCCH CDS399799 2340 - 0.336752
g6678 DLA_07438 GAOABQK02JOCCH CDS413316 432 - 0.333333
g6698 DLA_07459 GAOABQK02JOCCH CDS451732 909 + 0.326733
g6757 DLA_07525 GAOABQK02JOCCH CDS595310 516 - 0.337209
g6783 DLA_07558 catalyzes the reaction N-D-ribosylpurine Hsub2subO purine D-riboseGAOABQK02JOCCH CDS640398 1764 + 0.365646
g6908 DLA_07703 GLQOFTK02FH5TG CDS47920 3033 + 0.338609
g6955 DLA_07753 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGLQOFTK02FH5TG CDS148168 957 + 0.366771
g7164 DLA_07995 GLQOFTK02FH5TG CDS631778 744 - 0.319892
g718 DLA_00790 F4PJNLW01A00V1 CDS177891 606 - 0.334983
g7183 DLA_08016 GLQOFTK02FH5TG CDS674860 456 + 0.285088
g7363 DLA_08229 GLQOFTK02FH5TG CDS1077951 987 - 0.426545
g7483 DLA_08375 catalyzes the reaction Hsub2subO dCTP NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesGLQOFTK02FH5TG CDS1374165 513 - 0.319688
g7692 DLA_08603 GLQOFTK02G2F2O CDS312314 678 + 0.346608
g7693 DLA_08606 GLQOFTK02G2F2O CDS313796 672 + 0.394345
g7694 DLA_08607 GLQOFTK02G2F2O CDS315208 672 + 0.397321
g7695 DLA_08608 GLQOFTK02G2F2O CDS316850 672 + 0.394345
g7773 DLA_08690 GLQOFTK02G2F2O CDS495240 753 - 0.371846
g7829 DLA_08752 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisGLQOFTK02G2F2O CDS621182 1023 + 0.319648
g7883 DLA_08816 catalyzes the reaction 2'-deoxyribonucleoside diphosphate thioredoxin disulfide Hsub2subO ribonucleoside diphosphate reduced thioredoxin there is a second copy of this gene GLQOFTK02G2F2O CDS729424 1017 + 0.331367
g8090 DLA_09041 GLQOFTK02G2F2O CDS1198915 2142 - 0.340803
g8327 DLA_09293 GLQOFTK02G2F2O CDS1730494 543 + 0.305709
g8397 DLA_09366 GLQOFTK02G2F2O CDS1853927 819 + 0.326007
g854 DLA_00934 F4PJNLW01A00V1 CDS482667 663 - 0.374057
g8543 DLA_09524 GLQOFTK02GHM7A CDS127751 1023 - 0.347019
g8662 DLA_09657 GLQOFTK02GHM7A CDS411737 558 - 0.34767
g8748 DLA_11786 GLQOFTK02GHM7A CDS599878 1221 - 0.273546
g897 DLA_00990 F4PJNLW01A00V1 CDS580658 1035 - 0.264734
g899 DLA_00992 F4PJNLW01A00V1 CDS583527 1824 - 0.305921
g8990 DLA_11801 GLQOFTK02GQ36N CDS295397 828 - 0.35628
g9226 DLA_10279 GLQOFTK02GUKFG CDS170124 672 + 0.385417
g9243 DLA_10298 GLQOFTK02GUKFG CDS205635 4011 + 0.388432
g9674 DLA_10791 ortholog of the human DPYS defects in DPYS cause cause of DHP (dihydropyrimidinase) deficiency second enzyme in the reductive pyrimidine degradation pathway (EC 3.5.2.2) catalyzes the reaction: 56-dihydrouracil Hsub2subO 3-ureidopropanoateGLQOFTK02IRMR1 CDS173273 1485 + 0.358923
g9680 DLA_10797 GLQOFTK02IRMR1 CDS180196 1116 - 0.336918
g9799 DLA_10939 GLQOFTK02JL55Q CDS152479 1332 + 0.339339
 
Polysphondylium pallidum, PN500
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
g10157 PPL_10687 EXOLTKG01B86TH-3_part2 CDS791433 2166 - 0.382271
g10230 PPL_13602 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisEXOLTKG01B86TH-3y_part1 CDS101814 954 - 0.436059
g10345 PPL_10895 EXOLTKG01B86TH-3y_part1 CDS433930 2070 - 0.457488
g10581 PPL_11164 PN500-F-W-a08d11.p658-5_part2 CDS49513 1272 + 0.440252
g10601 PPL_11185 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisPN500-F-W-a08d11.p658-5_part2 CDS109463 957 + 0.434692
g10880 PPL_11485 PN500-F-W-a08d11.p658-5_part2 CDS908393 4044 - 0.465134
g1100 PPL_01276 DPPA0061d07.r1-5 CDS1159657 570 - 0.415789
g11009 PPL_11756 PN500-G-d-72b01.r1-5 CDS52683 1008 + 0.444444
g11020 PPL_11771 PN500-G-d-72b01.r1-5 CDS88930 714 - 0.417367
g11080 PPL_11834 PN500-G-d-72b01.r1-5 CDS276966 1386 - 0.483405
g11300 PPL_11563 PN500-G-d-188d09.r1-5 CDS59757 735 - 0.368707
g1249 PPL_01458 catalyzes the reaction CDP-choline 12-diacylglycerol CMP a phosphatidylcholineDPPA0090b03.f1-3_x_part2 CDS188566 2562 + 0.400468
g1403 PPL_01619 DPPA0090b03.f1-3_x_part3 CDS261674 762 - 0.452756
g1594 PPL_01827 DPPA0090b03.f1-3_x_part3 CDS782911 1344 - 0.424851
g1625 PPL_01861 DPPA0090b03.f1-3_x_part3 CDS881381 1131 + 0.394341
g1655 PPL_01895 similar to H. sapiens CECR1 protein (Swiss Prot Q9NZK5)DPPA0090b03.f1-3_x_part3 CDS948308 1545 - 0.352751
g1686 PPL_01926 DPPA0090b03.f1-3_x_part3 CDS1020533 1329 + 0.373965
g1786 PPL_02029 DPPA0090b03.f1-3_x_part3 CDS1322474 2475 - 0.43596
g1808 PPL_02049 DPPA0090b03.f1-3_x_part3 CDS1379378 639 - 0.386541
g1829 PPL_02075 DPPA0090b03.f1-3_x_part3 CDS1444784 1500 - 0.339333
g1890 PPL_02145 catalyzes the reaction UMP diphosphate uracil 5-phospho-alpha-D-ribose 1-diphosphateDPPA0090b03.f1-3_x_part3 CDS1649100 657 - 0.385084
g2365 PPL_02672 homolog of human and S. cerevisiae KTI12 (killer toxin insensitivity protein 12) S. cerevisiae KTI12 interacts with the Elongator complex a component of the elongating form of RNA polymerase II DPPA0090b03.f1-3_y_part1 CDS259954 660 - 0.393939
g2399 PPL_02705 catalyzes the reaction N-D-ribosylpurine Hsub2subO purine D-riboseDPPA0090b03.f1-3_y_part1 CDS346410 987 + 0.374873
g2562 PPL_02882 DPPA0090b03.f1-3_y_part1 CDS778990 525 - 0.32381
g2581 PPL_02904 DPPA0090b03.f1-3_y_part1 CDS828186 660 + 0.369697
g2924 PPL_03282 DPPA0090b03.f1-3_y_part1 CDS1783006 426 + 0.403756
g3131 PPL_03549 catalyzes the reaction AMP pyrophosphate PRPP adenine in nucleoside salvage pathwaysDPPA0255d09.f1-5 CDS16621 600 - 0.428333
g3583 PPL_04051 DPPB0337b12.r1-5 CDS1019641 1764 - 0.465986
g3620 PPL_04089 DPPB0337b12.r1-5 CDS1113775 1341 + 0.416107
g3802 PPL_04295 DPPB0360e11.f1-5 CDS314852 783 - 0.472542
g4353 PPL_04916 E0KFERV02EE9X2-3_part1 CDS907323 1116 - 0.474014
g461 PPL_00588 DPPA0004F08.r1-5_part2 CDS1346673 654 - 0.420489
g4726 PPL_13181 E3JQK7F01EFZL8-5 CDS269843 672 - 0.360119
g4967 PPL_13202 E3JQK7F01EFZL8-5 CDS941777 936 + 0.370726
g5082 PPL_05730 E3JQK7F01EFZL8-5 CDS1251577 564 - 0.381206
g5121 PPL_05767 multifunctional enzyme that carries out the three first enzymatic activities of the de novo pyrimidine biosynthetic pathway very similar to the tri-functional human CAD enzymeE3JQK7F01EFZL8-5 CDS1350382 6570 - 0.477321
g5137 PPL_05784 E3JQK7F01EFZL8-5 CDS1408621 870 + 0.329885
g5367 PPL_06022 E3JQK7F02G10GF-5 CDS595533 1350 - 0.403704
g5413 PPL_06072 E3JQK7F02G10GF-5 CDS716156 867 - 0.454441
g5552 PPL_06217 E3JQK7F02HEVRT-5 CDS22769 2970 - 0.420539
g5935 PPL_13289 ortholog of human FHIT which is a possible tumor suppressor for specific tissues numerous tumor types are associated with aberrant forms of human FHIT proteinE3JQK7F02HW0LE-5_part2 CDS142084 492 + 0.384146
g6149 PPL_06873 E3JQK7F02HW0LE-5_part2 CDS724537 1332 - 0.414414
g6309 PPL_07049 E3JQK7F02HW0LE-5_part2 CDS1187044 1437 - 0.454419
g6431 PPL_07192 E3JQK7F02HW0LE-5_part2 CDS1550140 573 - 0.397906
g6537 PPL_07306 E3JQK7F02HW0LE-5_part2 CDS1830095 606 - 0.379538
g6738 PPL_07542 EVG8W8Q01EEF2G-5 CDS37257 513 + 0.378168
g7325 PPL_13396 EVG8W8Q02J3HU6-3_part3 CDS337922 744 - 0.346774
g7353 PPL_08201 EVG8W8Q02J3HU6-3_part3 CDS399692 624 + 0.341346
g7565 PPL_08456 bifunctional enzyme that catalyzes the reactions Nsup10sup-formyl-Hsub4subF AICAR tetrahydrofolate phosphoribosyl-formamido-carboxamide and phosphoribosyl-formamido-carboxamide IMP Hsub2subO expressed in prespore cellsEVG8W8Q02J3HU6-3_part3 CDS1007225 1593 - 0.482109
g7618 PPL_08516 EVG8W8Q02J3HU6-3_part3 CDS1159929 741 + 0.395412
g7626 PPL_08523 EVG8W8Q02J3HU6-3_part3 CDS1177841 2607 - 0.475259
g7633 PPL_08529 highly similar to PRS involved in nucleotide histidine and tryptophan biosynthesisEVG8W8Q02J3HU6-3_part3 CDS1195939 957 + 0.347962
g7732 PPL_08638 EVKQ3GG01CS5PZ-3_part1 CDS242615 2409 + 0.479037
g7820 PPL_08740 EVKQ3GG01CS5PZ-3_part1 CDS490039 1926 - 0.535306
g7896 PPL_08826 EVKQ3GG01CS5PZ-3_part1 CDS727882 465 - 0.550538
g7902 PPL_08831 catalyzes the reaction ATP uridine ADP UMPEVKQ3GG01CS5PZ-3_part1 CDS743623 282 + 0.432624
g7910 PPL_08840 EVKQ3GG01CS5PZ-3_part1 CDS763999 546 - 0.421245
g7958 PPL_08895 catalyzes the reaction N10-formyl-Hsub4subF 5-phospho-ribosyl-glycineamide tetrahydrofolate 5'-phosphoribosyl-N-formylglycineamide in de novo DNA synthesisEVKQ3GG01CS5PZ-3_part1 CDS947321 645 - 0.393798
g8015 PPL_08958 contains a N-terminal uridine kinase domaine domain and a C-terminal adenylate cyclase domain like the UdkC protein and other plant proteinsEVKQ3GG01CS5PZ-3_part1 CDS1115932 1596 - 0.364662
g8059 PPL_08999 EVKQ3GG01CS5PZ-3_part1 CDS1216451 972 + 0.395062
g8218 PPL_09163 EVKQ3GG01CS5PZ-3_part1 CDS1653763 4041 - 0.386538
g8239 PPL_09188 EVKQ3GG01CS5PZ-3_part1 CDS1717559 744 - 0.435484
g8299 PPL_09259 EVKQ3GG01CS5PZ-3_part2 CDS28093 669 - 0.460389
g8377 PPL_09342 EVKQ3GG01CS5PZ-3_part2 CDS235509 942 + 0.468153
g8489 PPL_12098 catalyzes the reaction Hsub2subO allantoin allantoate expressed in upper cup cells during culminationEVKQ3GG01DOIJB_part1 CDS168779 1944 + 0.449074
g8513 PPL_12130 EVKQ3GG01DOIJB_part1 CDS248227 2232 + 0.409946
g8830 PPL_12473 EVKQ3GG01DOIJB_part2 CDS304019 1053 - 0.433048
g8832 PPL_12475 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearEVKQ3GG01DOIJB_part2 CDS308398 900 + 0.38
g9096 PPL_13517 EVKQ3GG02I325Y-5_part1 CDS324301 1746 - 0.428408
g9127 PPL_09559 catalyzes the reaction ATP uridine ADP UMPEVKQ3GG02I325Y-5_part1 CDS421114 1458 - 0.406722
g9135 PPL_09564 EVKQ3GG02I325Y-5_part1 CDS440445 1395 - 0.490323
g9207 PPL_09636 catalyzes the reaction Hsub2subO dCTP - NH3 dUTP in de novo biosynthesis of pyrimidine deoxyribonucleotidesEVKQ3GG02I325Y-5_part1 CDS638084 684 - 0.371345
g9335 PPL_09782 EVKQ3GG02I325Y-5_part1 CDS983039 1131 - 0.291777
g9510 PPL_09979 catalyzes the reaction L-glutamine PRPP Hsub2subO 5-phospho-beta-D-ribosyl-amine pyrophosphate L-glutamate the first step in de novo DNA synthesisEWNM59D01C4IL7-5_part1 CDS36780 1683 + 0.462864
g952 PPL_01118 catalyzes the reaction AMP ATP ADP ADP in de novo DNA synthesis predicted to be nuclearDPPA0061d07.r1-5 CDS739667 828 + 0.461353
g9554 PPL_10034 EWNM59D01C4IL7-5_part1 CDS157222 480 + 0.333333
g9581 PPL_10057 EWNM59D01C4IL7-5_part1 CDS226457 1335 - 0.465169
g9699 PPL_10183 EWNM59D01C4IL7-5_part1 CDS570904 1524 + 0.511811
g9961 PPL_10489 EXOLTKG01B86TH-3_part2 CDS187713 771 - 0.396887